Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082534

Identifier: 99082534

GI number: 99082534

Start: 2835568

End: 2836560

Strand: Reverse

Name: 99082534

Synonym: TM1040_2694

Alternate gene names: NA

Gene position: 2836560-2835568 (Counterclockwise)

Preceding gene: 99082535

Following gene: 99082533

Centisome position: 88.62

GC content: 61.53

Gene sequence:

>993_bases
ATGAAAGACAATCCGATTTCCCCGACGATTCCGCTCGATCAGGATGGTGTCCACCACGGATTTCTGAAACTGCCTTACAG
CCGTGACGACAGCGCCTGGGGCTCTGTGATGATCCCGATCACCGTCATTCAGAACGGCGCCGGCAAGACTGCGCTGTTGA
CGGGTGCCAATCACGGCGATGAATACGAAGGCCCCGTGGCGTTGCAGGAACTCGCCGCCACCACCCGTGCCGAGGATGTG
ACCGGCAGGCTCATTATTGTGCCTTACTTCAACTACCCTGCCTTTCGCGCCAGTGCGCGGACCTCGCCCATCGACCGGGG
CAATCTCAACCGCGCCTTTCCGGGCCGTCCCGATGGCACCGTCACGCAAAAGATCGCGGATTACTTTCAGCGTACGCTCC
TGCCGATGGCGGATGTGGCGGTGGATTTCCACTCCGGCGGCAAGACGCTGGATTTTGTCCCCTTTGCCGCTGCGCATATC
CTCGAGGACAAGGTGCTGCAGGATGCGTGCTTTGCCGCCATGCAGGCCTTCAACGCGCCCTACTCGGTGCAACTCCTCGA
GATCGACAGCGAGGGCATGTATGACACCGCCGTCGAGGAAATGGGCAAGGTGCTCGTGACCACCGAACTTGGCGGCGGTG
GCATGTCCACCGCGCGCAGCAATGCCATCGCCAAGAAAGGTCTGCGCAACGTGCTGATTCACTTTGGGATCTTGCAGGGC
GAGATGCAGATTGACCCGAGTGTGACGCTCGATATGCCCGACGGGGATTGCTACCTCTTCAGCGAGCACGACGGGTTGTT
TGAGATCATGATCGATCTTGGCGAACCTGTGCAAGAGGGCGATCTGGTCGCCCGCGTCTGGTCGCCCGACCGCACCGGAG
AGGCCCCGGTGGAATACCGCGCCCGCCGCAGCGGCGTGCTCATCAGCCGCCATTTCCCCGGTATGATCAAATCCGGTGAC
TGCGCCGCGGTGATCGGCGTGGTCGAGGGCTGA

Upstream 100 bases:

>100_bases
CTTTGAATTTGCGCCCGGTCTTCGTATGGGTAGCACAACGCGGCCGGCGCTCGTGACGCCGTGCCCTTTGCGCTCAACAG
GCAGGCAGAAGGACAAGGCA

Downstream 100 bases:

>100_bases
CATGCATCTCGATCAGCGCGACCTTGATATCCTTCGCATCCTGTCCCGCGATGGCCGCATCACCAAGGCGGCCCTTGCAG
ATCAGGTGGGTCTGTCGCCG

Product: succinylglutamate desuccinylase/aspartoacylase

Products: NA

Alternate protein names: Ectoine Utilization Protein EutE; Deacylase; Succinylglutamate Desuccinylase / Aspartoacylase Family; Succinylglutamate Desuccinylase/Aspartoacylase Family; Succinate Dehydrogenase Subunit; Succinylglutamatedesuccinylase/Aspartoacylase; Succinylglutamate Desuccinylase; Serine Protease; Aminoacylase-2/Carboxypeptidase-Z Family Hydrolase; AstE/AspA Family Protein; N-Acetyl Diamonbutyric Acid Acylase; Succinate Dehydrogenase Subunit Sdh

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MKDNPISPTIPLDQDGVHHGFLKLPYSRDDSAWGSVMIPITVIQNGAGKTALLTGANHGDEYEGPVALQELAATTRAEDV
TGRLIIVPYFNYPAFRASARTSPIDRGNLNRAFPGRPDGTVTQKIADYFQRTLLPMADVAVDFHSGGKTLDFVPFAAAHI
LEDKVLQDACFAAMQAFNAPYSVQLLEIDSEGMYDTAVEEMGKVLVTTELGGGGMSTARSNAIAKKGLRNVLIHFGILQG
EMQIDPSVTLDMPDGDCYLFSEHDGLFEIMIDLGEPVQEGDLVARVWSPDRTGEAPVEYRARRSGVLISRHFPGMIKSGD
CAAVIGVVEG

Sequences:

>Translated_330_residues
MKDNPISPTIPLDQDGVHHGFLKLPYSRDDSAWGSVMIPITVIQNGAGKTALLTGANHGDEYEGPVALQELAATTRAEDV
TGRLIIVPYFNYPAFRASARTSPIDRGNLNRAFPGRPDGTVTQKIADYFQRTLLPMADVAVDFHSGGKTLDFVPFAAAHI
LEDKVLQDACFAAMQAFNAPYSVQLLEIDSEGMYDTAVEEMGKVLVTTELGGGGMSTARSNAIAKKGLRNVLIHFGILQG
EMQIDPSVTLDMPDGDCYLFSEHDGLFEIMIDLGEPVQEGDLVARVWSPDRTGEAPVEYRARRSGVLISRHFPGMIKSGD
CAAVIGVVEG
>Mature_330_residues
MKDNPISPTIPLDQDGVHHGFLKLPYSRDDSAWGSVMIPITVIQNGAGKTALLTGANHGDEYEGPVALQELAATTRAEDV
TGRLIIVPYFNYPAFRASARTSPIDRGNLNRAFPGRPDGTVTQKIADYFQRTLLPMADVAVDFHSGGKTLDFVPFAAAHI
LEDKVLQDACFAAMQAFNAPYSVQLLEIDSEGMYDTAVEEMGKVLVTTELGGGGMSTARSNAIAKKGLRNVLIHFGILQG
EMQIDPSVTLDMPDGDCYLFSEHDGLFEIMIDLGEPVQEGDLVARVWSPDRTGEAPVEYRARRSGVLISRHFPGMIKSGD
CAAVIGVVEG

Specific function: Unknown

COG id: COG3608

COG function: function code R; Predicted deacylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35656; Mature: 35656

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDNPISPTIPLDQDGVHHGFLKLPYSRDDSAWGSVMIPITVIQNGAGKTALLTGANHGD
CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCC
EYEGPVALQELAATTRAEDVTGRLIIVPYFNYPAFRASARTSPIDRGNLNRAFPGRPDGT
CCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCH
VTQKIADYFQRTLLPMADVAVDFHSGGKTLDFVPFAAAHILEDKVLQDACFAAMQAFNAP
HHHHHHHHHHHHHCCHHHHEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YSVQLLEIDSEGMYDTAVEEMGKVLVTTELGGGGMSTARSNAIAKKGLRNVLIHFGILQG
CEEEEEEECCCCCHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEEC
EMQIDPSVTLDMPDGDCYLFSEHDGLFEIMIDLGEPVQEGDLVARVWSPDRTGEAPVEYR
CEEECCCEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCHHHH
ARRSGVLISRHFPGMIKSGDCAAVIGVVEG
HHCCCEEEEECCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MKDNPISPTIPLDQDGVHHGFLKLPYSRDDSAWGSVMIPITVIQNGAGKTALLTGANHGD
CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCC
EYEGPVALQELAATTRAEDVTGRLIIVPYFNYPAFRASARTSPIDRGNLNRAFPGRPDGT
CCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCH
VTQKIADYFQRTLLPMADVAVDFHSGGKTLDFVPFAAAHILEDKVLQDACFAAMQAFNAP
HHHHHHHHHHHHHCCHHHHEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YSVQLLEIDSEGMYDTAVEEMGKVLVTTELGGGGMSTARSNAIAKKGLRNVLIHFGILQG
CEEEEEEECCCCCHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEEC
EMQIDPSVTLDMPDGDCYLFSEHDGLFEIMIDLGEPVQEGDLVARVWSPDRTGEAPVEYR
CEEECCCEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCHHHH
ARRSGVLISRHFPGMIKSGDCAAVIGVVEG
HHCCCEEEEECCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA