Click here to switch to the map view.

The map label for this gene is ynfM [C]

Identifier: 99082455

GI number: 99082455

Start: 2748232

End: 2749446

Strand: Direct

Name: ynfM [C]

Synonym: TM1040_2615

Alternate gene names: 99082455

Gene position: 2748232-2749446 (Clockwise)

Preceding gene: 99082453

Following gene: 99082456

Centisome position: 85.86

GC content: 66.42

Gene sequence:

>1215_bases
ATGACTGCCGCCCCTTCCACCCTGCCTGCGCTGGACCGTCGCGCGGTTGCGCTGTTGCTCGCCGCGACGCTAACGACCAT
GGCCAATGCCGCCATCAGCCCCGCCCTGCCCGGCCTGGAGGCCCGGTTTGCCGACCACCCGCAGGCGGCCCTTCTGACAC
GTTTCCTGGTGCCCGCGCCCTCGGTGGCGGTGGTGCTGATCGCGGGGTGGGCCGGTGTACTGGCGGATCGACTGGGTCGT
CGTCCGATGTTGATTGGTGGAGTGCTGCTCTTTGCGCTGGCCGGTAGCCTCGGCATGGTCCTGGGCAGCCTTGAGGCGAT
CCTCTTGAGCCGCCTCGCCCTTGGGGTGGCAGTGGCCCTCATCATGACAGCGCAGACCGCTCTTATTGCGGACTACTTCG
ACGGCGCGGCCCGCAGTCGCGTTCTGGGGCTGCAAATCTCGGCCCGAAACCTCGGCGGGCTGGTGTCGATCACCCTTGCG
GGCGTGCTCGCCCTGATGTCGCCCATGCATGCGTTTGCGATCCACGGACTCGCGCTCTTGATCCTCCCGATCCTCTGGTG
TGCGATTTCAGAGCCCAAACGCCCCAGCCCAGCGACCACCGCGCGCGGTGCTCCCCCTGCGACAACACAGAGGCTGGGGC
TTGGTCTTTGGGCCATCGCGGGGCTGCAAATGCTGACCACGATCTGCTTTTTCACCATGCCCACGCAGGTGCCGTTCTTT
GTCGCCAGTCACGGCATCAAAAACACGGCAATCATCGGCTCCGTGATGGGGGCGCTGACGCTCGCGGGGATGCTGGCGGC
CACCCGCTACAGCACGCTCAAACCCCGGCTTGGGCACGCGCGGCTCTTTCTGCTGGGCTATGGGCTCATGGGGCTTGGGA
TGGCGGTACTGGCCCTTGCGCCGGGTCTTGCGATGATCTTTCTGGGGGCCGCGCTGGTCGGGCTTGGCTTTGCCACCGTC
TCTCCGAATTTCAACGAAATTGCCCTGCGCGCCGCCCCCGCAGATCTGCGCGGGCGGGCTGCTGGGATCATGACAACTTC
GGTCTTTCTTGGGCAGATCGTCTCTCCGTTTCTGACCCTGCCCATGGTGCGCCACGCGGGCTACTCTGGGACCTTCGCGA
CCCTTGCTGTCCTGCTTGGGCTGGCCGCCTTGGTCGCGCTTCTGGCCTATGGGGTCACACGCGGCGCAACCGATGCCGCC
GAGCGCGCCTCCTAG

Upstream 100 bases:

>100_bases
TTTTGCGACTTCTCCGATGTCGAGCAATTTCATTATTGACCTCAAGTTGACTTGAATTCGTAGCCTGCCCTTCGAAATTG
ATTTTGGCAAGGAGATCTCA

Downstream 100 bases:

>100_bases
GTGCCCTGCCGGTGACGATCGCGCTTGCAATGAAGGGGGATCTGGCCTAAACACCGCGCGTCCGGGGCTCTGATCGAGTC
GTCCGGGCTCGCTTTGTTTG

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; MFS Permease; Facilitator Family Protein; Facilitator Family Transporter; Transporter Facilitator Family; Efflux Protein; MFS Transport System Component; Facilitator Superfamily Transporter; Facilitator Family Multidrug Efflux Transporter; Facilitator Superfamily Efflux Protein; Transporter-Like Membrane Protein; Facilitator Superfamily Permease

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MTAAPSTLPALDRRAVALLLAATLTTMANAAISPALPGLEARFADHPQAALLTRFLVPAPSVAVVLIAGWAGVLADRLGR
RPMLIGGVLLFALAGSLGMVLGSLEAILLSRLALGVAVALIMTAQTALIADYFDGAARSRVLGLQISARNLGGLVSITLA
GVLALMSPMHAFAIHGLALLILPILWCAISEPKRPSPATTARGAPPATTQRLGLGLWAIAGLQMLTTICFFTMPTQVPFF
VASHGIKNTAIIGSVMGALTLAGMLAATRYSTLKPRLGHARLFLLGYGLMGLGMAVLALAPGLAMIFLGAALVGLGFATV
SPNFNEIALRAAPADLRGRAAGIMTTSVFLGQIVSPFLTLPMVRHAGYSGTFATLAVLLGLAALVALLAYGVTRGATDAA
ERAS

Sequences:

>Translated_404_residues
MTAAPSTLPALDRRAVALLLAATLTTMANAAISPALPGLEARFADHPQAALLTRFLVPAPSVAVVLIAGWAGVLADRLGR
RPMLIGGVLLFALAGSLGMVLGSLEAILLSRLALGVAVALIMTAQTALIADYFDGAARSRVLGLQISARNLGGLVSITLA
GVLALMSPMHAFAIHGLALLILPILWCAISEPKRPSPATTARGAPPATTQRLGLGLWAIAGLQMLTTICFFTMPTQVPFF
VASHGIKNTAIIGSVMGALTLAGMLAATRYSTLKPRLGHARLFLLGYGLMGLGMAVLALAPGLAMIFLGAALVGLGFATV
SPNFNEIALRAAPADLRGRAAGIMTTSVFLGQIVSPFLTLPMVRHAGYSGTFATLAVLLGLAALVALLAYGVTRGATDAA
ERAS
>Mature_403_residues
TAAPSTLPALDRRAVALLLAATLTTMANAAISPALPGLEARFADHPQAALLTRFLVPAPSVAVVLIAGWAGVLADRLGRR
PMLIGGVLLFALAGSLGMVLGSLEAILLSRLALGVAVALIMTAQTALIADYFDGAARSRVLGLQISARNLGGLVSITLAG
VLALMSPMHAFAIHGLALLILPILWCAISEPKRPSPATTARGAPPATTQRLGLGLWAIAGLQMLTTICFFTMPTQVPFFV
ASHGIKNTAIIGSVMGALTLAGMLAATRYSTLKPRLGHARLFLLGYGLMGLGMAVLALAPGLAMIFLGAALVGLGFATVS
PNFNEIALRAAPADLRGRAAGIMTTSVFLGQIVSPFLTLPMVRHAGYSGTFATLAVLLGLAALVALLAYGVTRGATDAAE
RAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41351; Mature: 41220

Theoretical pI: Translated: 11.74; Mature: 11.74

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAPSTLPALDRRAVALLLAATLTTMANAAISPALPGLEARFADHPQAALLTRFLVPAP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHCCCC
SVAVVLIAGWAGVLADRLGRRPMLIGGVLLFALAGSLGMVLGSLEAILLSRLALGVAVAL
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMTAQTALIADYFDGAARSRVLGLQISARNLGGLVSITLAGVLALMSPMHAFAIHGLALL
HHHHHHHHHHHHHCCHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILPILWCAISEPKRPSPATTARGAPPATTQRLGLGLWAIAGLQMLTTICFFTMPTQVPFF
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VASHGIKNTAIIGSVMGALTLAGMLAATRYSTLKPRLGHARLFLLGYGLMGLGMAVLALA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
PGLAMIFLGAALVGLGFATVSPNFNEIALRAAPADLRGRAAGIMTTSVFLGQIVSPFLTL
HHHHHHHHHHHHHHCCHHCCCCCCCCEEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHH
PMVRHAGYSGTFATLAVLLGLAALVALLAYGVTRGATDAAERAS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC
>Mature Secondary Structure 
TAAPSTLPALDRRAVALLLAATLTTMANAAISPALPGLEARFADHPQAALLTRFLVPAP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHCCCC
SVAVVLIAGWAGVLADRLGRRPMLIGGVLLFALAGSLGMVLGSLEAILLSRLALGVAVAL
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMTAQTALIADYFDGAARSRVLGLQISARNLGGLVSITLAGVLALMSPMHAFAIHGLALL
HHHHHHHHHHHHHCCHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILPILWCAISEPKRPSPATTARGAPPATTQRLGLGLWAIAGLQMLTTICFFTMPTQVPFF
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VASHGIKNTAIIGSVMGALTLAGMLAATRYSTLKPRLGHARLFLLGYGLMGLGMAVLALA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
PGLAMIFLGAALVGLGFATVSPNFNEIALRAAPADLRGRAAGIMTTSVFLGQIVSPFLTL
HHHHHHHHHHHHHHCCHHCCCCCCCCEEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHH
PMVRHAGYSGTFATLAVLLGLAALVALLAYGVTRGATDAAERAS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA