| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is yegP [C]
Identifier: 99082453
GI number: 99082453
Start: 2747330
End: 2747662
Strand: Direct
Name: yegP [C]
Synonym: TM1040_2613
Alternate gene names: 99082453
Gene position: 2747330-2747662 (Clockwise)
Preceding gene: 99082451
Following gene: 99082455
Centisome position: 85.83
GC content: 60.06
Gene sequence:
>333_bases ATGGCAGCAAAGTTTGAACTCTACACCGACAACGCAGGCGAATTTCGCTTCCGCCTCAAGGCGGGCAATGGCGAGAACAT CCTGGCCAGCGAAGGCTACAAGCAAAAGGCCAGCGCCGAAAACGGAATCGAGTCGGTCAAGAAGAACGCCGCTGACGAGG CCCGTTTCGAGCGCAAGGAAACCGCAGCTGGCAAGCATATGTTCAACCTCAAGGCCAGCAACGGTCAGGTGATCGGCACC TCGCAGAGCTACGCAAGCGCCTCCGGTCGTGATGGCGGCATCGAGTCGGTGATGCGCAACGCCCCCGAGGCCCGCATCGA AGACCTGACCTGA
Upstream 100 bases:
>100_bases CTGCGAACACCGGCCCTGACGCACATCTGTCCGTTGCCCGAGGGGGGCTGGCGTGCTTTAGTCGCCTTGGTAAGTAAACG TAAGAACCGGGAGATCTCCG
Downstream 100 bases:
>100_bases TCTCCCCTTCGGCACTCTGATCTGACCTCAGAACAGAGCAGCTCCGGATCGCCTGAGCCCTGCGCGAACGCGGGGCTCAA CTCTTTCCTTTGGGGGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF117 [H]
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MAAKFELYTDNAGEFRFRLKAGNGENILASEGYKQKASAENGIESVKKNAADEARFERKETAAGKHMFNLKASNGQVIGT SQSYASASGRDGGIESVMRNAPEARIEDLT
Sequences:
>Translated_110_residues MAAKFELYTDNAGEFRFRLKAGNGENILASEGYKQKASAENGIESVKKNAADEARFERKETAAGKHMFNLKASNGQVIGT SQSYASASGRDGGIESVMRNAPEARIEDLT >Mature_109_residues AAKFELYTDNAGEFRFRLKAGNGENILASEGYKQKASAENGIESVKKNAADEARFERKETAAGKHMFNLKASNGQVIGTS QSYASASGRDGGIESVMRNAPEARIEDLT
Specific function: Unknown
COG id: COG3422
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0339 family. Duplicated subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082037, Length=110, Percent_Identity=51.8181818181818, Blast_Score=108, Evalue=6e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010879 [H]
Pfam domain/function: PF07411 DUF1508 [H]
EC number: NA
Molecular weight: Translated: 11878; Mature: 11747
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKFELYTDNAGEFRFRLKAGNGENILASEGYKQKASAENGIESVKKNAADEARFERKE CCCEEEEEECCCCEEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHH TAAGKHMFNLKASNGQVIGTSQSYASASGRDGGIESVMRNAPEARIEDLT HCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC >Mature Secondary Structure AAKFELYTDNAGEFRFRLKAGNGENILASEGYKQKASAENGIESVKKNAADEARFERKE CCEEEEEECCCCEEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHH TAAGKHMFNLKASNGQVIGTSQSYASASGRDGGIESVMRNAPEARIEDLT HCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9791102 [H]