| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082450
Identifier: 99082450
GI number: 99082450
Start: 2744907
End: 2745917
Strand: Reverse
Name: 99082450
Synonym: TM1040_2610
Alternate gene names: NA
Gene position: 2745917-2744907 (Counterclockwise)
Preceding gene: 99082452
Following gene: 99082442
Centisome position: 85.78
GC content: 60.73
Gene sequence:
>1011_bases ATGGAGCAGCGTCCCGGGGGGCACATGAGCGATACGTCCAATCAGTCCGGACCGGATCTGGATCGCGAGCGGGTCGCGCA GGCACTGGGGATTGCGACAGATCGCGCGCGATGGCGCCTGATCAAATCCACAGCCGCGCGCGAGGTCTTTTTGCTGGAGG GGACAGACTGCGATCCCTTGGTGGTGAAATATGACGATGACGTCTCGCAGGTGCGCTTTGGCGAATTGCTGTCGTGCTAT CGCTCTTTGGAGCGTGTCATGGGACGCGATGGCGCCTTTCGAATGGTGCCTCTGGTCTGGGCTGATGCCGAAAACCGCGT TCTTGCGCTGAAGTATGTTCCGGGGCTCACAGCATATGCCCGGCTGGAGGCCGCCGAAATAGATTTCGACAGCCGCGCCG ATGTATTGCGCCACTGTGGCGCATGGTTGAGGCAGCTGCATCAGAGCGCTTCAGACACCCCGCAGCCCTTTGACGGAGAG GGGATGCTGAAACGCGTACGCCGCGTTGCGAAGACCATTCGAAGCGGGTCGCAAGAGGTTGCCTATCCCAAGAAATTCCT TGGCATCTGTGCCTTCATGCACCATGTGACGCGCGGCGCACAGGGCAGGCCCTGCCGGCACGGGACGCGCCACGGAGATT TCCATAGCCGGAACGTCGTCTTTGGGCGCGATGGGCCGCTTTATGCTTTGGATCCGGCGCCGCGCGATACCGGTCCCGTG GCTTTTGATGTGGCGCGTTTCATGACCCGGCTCGGGTATTCCTTTGGCCTGGCGCGAACGCAAACGCGCGGATTGGCGGG ACTCCCAGCGGCGGATTGGGTCGCGCTCAGCGCGGGATATGGTCATCCGTGTCAGGACGACCCTGTGGTGCATTTTCTTT TGTGCCACCAGCTCTTTAATGACTGGTTGCAGATGCCAGTAGAAAAGGAACACCGCAGCGCGTCGCAGCAGCGCCGAATT GAGCGGATAGTCTCGATGTTTGAAGTGCTGAGGCAGCAGCTTCAGACGTGA
Upstream 100 bases:
>100_bases ATCGAGAGGCGCCCATGGGATTTTGTTGGTTTGCTCATGGCAAAAGTGCATGCCGCCCTTCAGTAAGGTTTGCAATAGGG ATTTGTGGGGGATTACTCAT
Downstream 100 bases:
>100_bases TTAAAACACGCCCGCTGGTGGGTCTGCGATGATGCGGCCCTGAGAGAGGTCCACCGTCGGCACCGCCGCCTTGGTAAAGG GCAGAAGCACCGTGGCCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MEQRPGGHMSDTSNQSGPDLDRERVAQALGIATDRARWRLIKSTAAREVFLLEGTDCDPLVVKYDDDVSQVRFGELLSCY RSLERVMGRDGAFRMVPLVWADAENRVLALKYVPGLTAYARLEAAEIDFDSRADVLRHCGAWLRQLHQSASDTPQPFDGE GMLKRVRRVAKTIRSGSQEVAYPKKFLGICAFMHHVTRGAQGRPCRHGTRHGDFHSRNVVFGRDGPLYALDPAPRDTGPV AFDVARFMTRLGYSFGLARTQTRGLAGLPAADWVALSAGYGHPCQDDPVVHFLLCHQLFNDWLQMPVEKEHRSASQQRRI ERIVSMFEVLRQQLQT
Sequences:
>Translated_336_residues MEQRPGGHMSDTSNQSGPDLDRERVAQALGIATDRARWRLIKSTAAREVFLLEGTDCDPLVVKYDDDVSQVRFGELLSCY RSLERVMGRDGAFRMVPLVWADAENRVLALKYVPGLTAYARLEAAEIDFDSRADVLRHCGAWLRQLHQSASDTPQPFDGE GMLKRVRRVAKTIRSGSQEVAYPKKFLGICAFMHHVTRGAQGRPCRHGTRHGDFHSRNVVFGRDGPLYALDPAPRDTGPV AFDVARFMTRLGYSFGLARTQTRGLAGLPAADWVALSAGYGHPCQDDPVVHFLLCHQLFNDWLQMPVEKEHRSASQQRRI ERIVSMFEVLRQQLQT >Mature_336_residues MEQRPGGHMSDTSNQSGPDLDRERVAQALGIATDRARWRLIKSTAAREVFLLEGTDCDPLVVKYDDDVSQVRFGELLSCY RSLERVMGRDGAFRMVPLVWADAENRVLALKYVPGLTAYARLEAAEIDFDSRADVLRHCGAWLRQLHQSASDTPQPFDGE GMLKRVRRVAKTIRSGSQEVAYPKKFLGICAFMHHVTRGAQGRPCRHGTRHGDFHSRNVVFGRDGPLYALDPAPRDTGPV AFDVARFMTRLGYSFGLARTQTRGLAGLPAADWVALSAGYGHPCQDDPVVHFLLCHQLFNDWLQMPVEKEHRSASQQRRI ERIVSMFEVLRQQLQT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37832; Mature: 37832
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQRPGGHMSDTSNQSGPDLDRERVAQALGIATDRARWRLIKSTAAREVFLLEGTDCDPL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEECCCCCCE VVKYDDDVSQVRFGELLSCYRSLERVMGRDGAFRMVPLVWADAENRVLALKYVPGLTAYA EEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEECCCCHHHH RLEAAEIDFDSRADVLRHCGAWLRQLHQSASDTPQPFDGEGMLKRVRRVAKTIRSGSQEV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHH AYPKKFLGICAFMHHVTRGAQGRPCRHGTRHGDFHSRNVVFGRDGPLYALDPAPRDTGPV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCH AFDVARFMTRLGYSFGLARTQTRGLAGLPAADWVALSAGYGHPCQDDPVVHFLLCHQLFN HHHHHHHHHHHCHHHCCHHHHCCCCCCCCCHHHHEEECCCCCCCCCCHHHHHHHHHHHHH DWLQMPVEKEHRSASQQRRIERIVSMFEVLRQQLQT HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEQRPGGHMSDTSNQSGPDLDRERVAQALGIATDRARWRLIKSTAAREVFLLEGTDCDPL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEECCCCCCE VVKYDDDVSQVRFGELLSCYRSLERVMGRDGAFRMVPLVWADAENRVLALKYVPGLTAYA EEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEECCCCHHHH RLEAAEIDFDSRADVLRHCGAWLRQLHQSASDTPQPFDGEGMLKRVRRVAKTIRSGSQEV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHH AYPKKFLGICAFMHHVTRGAQGRPCRHGTRHGDFHSRNVVFGRDGPLYALDPAPRDTGPV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCH AFDVARFMTRLGYSFGLARTQTRGLAGLPAADWVALSAGYGHPCQDDPVVHFLLCHQLFN HHHHHHHHHHHCHHHCCHHHHCCCCCCCCCHHHHEEECCCCCCCCCCHHHHHHHHHHHHH DWLQMPVEKEHRSASQQRRIERIVSMFEVLRQQLQT HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA