| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is bluB [H]
Identifier: 99082448
GI number: 99082448
Start: 2743548
End: 2744201
Strand: Direct
Name: bluB [H]
Synonym: TM1040_2608
Alternate gene names: 99082448
Gene position: 2743548-2744201 (Clockwise)
Preceding gene: 99082447
Following gene: 99082449
Centisome position: 85.71
GC content: 66.21
Gene sequence:
>654_bases ATGACGGGCCCGGTGCAGGAGGCAAAGGGATGTTTCCCGCAGGCGTTCCGCGCCGAGCTCGATCTGTTGATGAAATTGCG CCGGGACGTCCGGCGCTTTCGCACCGATCCGGTGGACGAGGCAGTGCTGACGCGCTGCCTCTCTGCCATTTCGCTGGCGC CTTCCGTGGGTCTCAGCGAGCCTTGGCGCATCATCCGCGTCGAAAGCGAGACCGCCCGCGCGGCGGCTCTACAGAATTTC GAGACCGCCAATGCCGAGGCGCTGGCGGACTACAGCGAGGATCGCGCTGCCACCTATGCGCGCCTCAAACTCTCCGGCAT GCGCGAAGCCCCGGTCCAGATCGCCTTCTTTTGCGATGACGAGACCGGCAAGGGGCACGGCCTTGGCGCGCGCAGCATGC CGGAAATGCGCCGCTATTCGGTGGTGACGGCGGTCACGCTCTTCTGGCTCGCGCTGCGCGCCGAAGGGCTGGGGCTCGGC TGGGTTTCGGTGCTTGATCCCGCCCGAATGGCGCGCGATCTGGATGTGCCTCAAAGCTGGAGCCTCATCGGGTATTTCTG CATCGGCCACCCGGAGCGCCTGTCGGACACGCCGGAACTGGAGCAGGAAGGCTGGGAACAGCGCTTTGCCGCACTCCCGA TCGAGACCCGCTGA
Upstream 100 bases:
>100_bases CCCAACAAAGCGAAGCCGGGCAAGAAAGCTCAGGAGCGCGCTGAAGAGAAAGCCGCCAAGGCAGCAGAAGCCGCCGAAGC AGCAGACGCGGAATAATCAC
Downstream 100 bases:
>100_bases GGCGGTGGTGCAGACGTGGGACTGACATCGGGGCGAACATGGGGCTGATCCGCATGGTGATCTTCACCCTTGTCGCCTTT GGCGCCGGGGTTCTTTATGA
Product: Cob(II)yrinic acid a,c-diamide reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MTGPVQEAKGCFPQAFRAELDLLMKLRRDVRRFRTDPVDEAVLTRCLSAISLAPSVGLSEPWRIIRVESETARAAALQNF ETANAEALADYSEDRAATYARLKLSGMREAPVQIAFFCDDETGKGHGLGARSMPEMRRYSVVTAVTLFWLALRAEGLGLG WVSVLDPARMARDLDVPQSWSLIGYFCIGHPERLSDTPELEQEGWEQRFAALPIETR
Sequences:
>Translated_217_residues MTGPVQEAKGCFPQAFRAELDLLMKLRRDVRRFRTDPVDEAVLTRCLSAISLAPSVGLSEPWRIIRVESETARAAALQNF ETANAEALADYSEDRAATYARLKLSGMREAPVQIAFFCDDETGKGHGLGARSMPEMRRYSVVTAVTLFWLALRAEGLGLG WVSVLDPARMARDLDVPQSWSLIGYFCIGHPERLSDTPELEQEGWEQRFAALPIETR >Mature_216_residues TGPVQEAKGCFPQAFRAELDLLMKLRRDVRRFRTDPVDEAVLTRCLSAISLAPSVGLSEPWRIIRVESETARAAALQNFE TANAEALADYSEDRAATYARLKLSGMREAPVQIAFFCDDETGKGHGLGARSMPEMRRYSVVTAVTLFWLALRAEGLGLGW VSVLDPARMARDLDVPQSWSLIGYFCIGHPERLSDTPELEQEGWEQRFAALPIETR
Specific function: Maybe catalyzes the reduction of Co(2+) to Co(+) in cob(II)yrinic acid A,C-diamide to allow adenosylation to procede [H]
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012825 - InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: =1.16.8.1 [H]
Molecular weight: Translated: 24233; Mature: 24102
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPVQEAKGCFPQAFRAELDLLMKLRRDVRRFRTDPVDEAVLTRCLSAISLAPSVGLSE CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC PWRIIRVESETARAAALQNFETANAEALADYSEDRAATYARLKLSGMREAPVQIAFFCDD CEEEEEECCHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEECC ETGKGHGLGARSMPEMRRYSVVTAVTLFWLALRAEGLGLGWVSVLDPARMARDLDVPQSW CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHCCCCCCC SLIGYFCIGHPERLSDTPELEQEGWEQRFAALPIETR CCEEEEECCCHHHCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TGPVQEAKGCFPQAFRAELDLLMKLRRDVRRFRTDPVDEAVLTRCLSAISLAPSVGLSE CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC PWRIIRVESETARAAALQNFETANAEALADYSEDRAATYARLKLSGMREAPVQIAFFCDD CEEEEEECCHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEECC ETGKGHGLGARSMPEMRRYSVVTAVTLFWLALRAEGLGLGWVSVLDPARMARDLDVPQSW CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHCCCCCCC SLIGYFCIGHPERLSDTPELEQEGWEQRFAALPIETR CCEEEEECCCHHHCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7635831; 9256491 [H]