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The map label for this gene is atpE

Identifier: 99082433

GI number: 99082433

Start: 2732629

End: 2732853

Strand: Reverse

Name: atpE

Synonym: TM1040_2593

Alternate gene names: 99082433

Gene position: 2732853-2732629 (Counterclockwise)

Preceding gene: 99082434

Following gene: 99082432

Centisome position: 85.38

GC content: 60.0

Gene sequence:

>225_bases
ATGGAAGGCGATCTCGCATACATCGGCGCTGGCCTGGCTGGCATGGGTACTGGTATTGCTGCTCTGGGTGTTGGCAACGT
TGCTGCTAACTTCCTGGCGGGCGCTCTGCGCAACCCCTCCGCGGCTGCTTCCCAGACCGCAACCCTCTTCATCGGCATCG
CATTTGCAGAAGCTCTGGGCATCTTCTCGTTCCTGGTCGCTCTGCTGCTGATGTTCGCCGTCTAA

Upstream 100 bases:

>100_bases
TGACCTGTGTCTATCTGAAAGACGCGCTGCACCCGTCCCACTAAGGGCAGGCTGCTGGTCTGAACTACTACCTCAACTTC
CAATCGTAAGGAGATATCAA

Downstream 100 bases:

>100_bases
GACTCCGGAACACTTTTTCCTTACGGCCGGGCGGAGTGCCAACCGCGCCCCGCCCGGTGTAACGGCAAGTTCCATAGGAG
GACGACATGGCAACTACTAC

Product: F0F1 ATP synthase subunit C

Products: NA

Alternate protein names: ATP synthase F(0) sector subunit c; F-type ATPase subunit c; F-ATPase subunit c; Lipid-binding protein

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MEGDLAYIGAGLAGMGTGIAALGVGNVAANFLAGALRNPSAAASQTATLFIGIAFAEALGIFSFLVALLLMFAV

Sequences:

>Translated_74_residues
MEGDLAYIGAGLAGMGTGIAALGVGNVAANFLAGALRNPSAAASQTATLFIGIAFAEALGIFSFLVALLLMFAV
>Mature_74_residues
MEGDLAYIGAGLAGMGTGIAALGVGNVAANFLAGALRNPSAAASQTATLFIGIAFAEALGIFSFLVALLLMFAV

Specific function: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits

COG id: COG0636

COG function: function code C; F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase C chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPL_SILST (Q1GDE1)

Other databases:

- EMBL:   CP000377
- RefSeq:   YP_614587.1
- ProteinModelPortal:   Q1GDE1
- SMR:   Q1GDE1
- STRING:   Q1GDE1
- GeneID:   4077504
- GenomeReviews:   CP000377_GR
- KEGG:   sit:TM1040_2593
- eggNOG:   COG0636
- HOGENOM:   HBG753983
- OMA:   FMAIGMY
- ProtClustDB:   PRK07558
- BioCyc:   SSP292414:TM1040_2593-MONOMER
- HAMAP:   MF_01396
- InterPro:   IPR000454
- InterPro:   IPR002379
- Gene3D:   G3DSA:1.20.20.10
- PRINTS:   PR00124

Pfam domain/function: PF00137 ATP-synt_C; SSF81333 ATPase_F0/V0_c

EC number: NA

Molecular weight: Translated: 7234; Mature: 7234

Theoretical pI: Translated: 3.93; Mature: 3.93

Prosite motif: PS00605 ATPASE_C

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12224b48)-; HASH(0x11be34b0)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGDLAYIGAGLAGMGTGIAALGVGNVAANFLAGALRNPSAAASQTATLFIGIAFAEALG
CCCCHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
IFSFLVALLLMFAV
HHHHHHHHHHHHCH
>Mature Secondary Structure
MEGDLAYIGAGLAGMGTGIAALGVGNVAANFLAGALRNPSAAASQTATLFIGIAFAEALG
CCCCHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
IFSFLVALLLMFAV
HHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA