| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is yqjG [H]
Identifier: 99082423
GI number: 99082423
Start: 2720387
End: 2721361
Strand: Direct
Name: yqjG [H]
Synonym: TM1040_2583
Alternate gene names: 99082423
Gene position: 2720387-2721361 (Clockwise)
Preceding gene: 99082421
Following gene: 99082424
Centisome position: 84.99
GC content: 57.64
Gene sequence:
>975_bases ATGGGACTGCTGGTCGACGGCAAATGGGAAGATGTCTGGTATGACACCAAGTCACACGGTGGCGCATTCAAACGCTCCGA GGCACAGTTTCGCAACTGGCTGACCGCAGACGGGAGCCCCGGTCCTGATGGCCAGACCGGCTTTAAAGCCGAAAACGGCC GCTATCATCTCTATGTGTCCTACGCCTGCCCCTGGGCGCATCGCACACTAATCTTTCGCAAGCTCAAAGGGCTGGAAGAC CACATCAGCGTCTCGGTCGTGCATCCGGACATGCTCGACAAAGGCTGGGAATTCAAAACCGACGCGGACGGCGCCACTGG TGATGCGCTCTTTGGCTTTGACTATATGCACCAGATCTACACCAAGGCTGATCCGTCCTACTCGGGTCGGGTCACGGTGC CAGTCCTCTGGGACAAGCAGGAAAACACCATTGTCTCGAACGAGAGCGCCGAGATCATCCGCATGTTCAACTCCGCCTTT GACGAGATCACAGGCAATACGCTCGATTTCTGGCCCGAAGAGCTGCGCGAGCCGATCGAGACCGTGAACAAGCGTATTTA TGACACCGTAAATAATGGCGTCTACAAATCCGGCTTTGCCACCTCGCAAGAGGCCTATGACGCCGCTGTGGTGCCACTCT TTGACAGCCTCGACTGGCTCGAAGACATCCTGAGCCAGCATCGCTACCTGATGGGCGAGCACCTGACCGAGGCCGACTGG CGTCTGTTCACGACGCTCGTGCGCTTTGATCCGGTTTATCACCTGCATTTCAAATGCAATCGCCGCCGGATCATCGACTA TCCGAACCTCTGGGCCTACACCCGCGAGCTCTATCAGATGCCCGGCGTGGCAGAGACCGTGGTGATGCCGCATATCGTGC GCCATTATCACTACAGCCATGACACCATTAACCCCAACCGCATTCTGCCGATCAATCCGGTGCTCGATTGGGAGGCCCCG CACGGACGCGGCTGA
Upstream 100 bases:
>100_bases GACCTGTGCATCGGCGCAGGGAAACTGCGCAGCAGTGGAGGTGGCCCGAAAGCGCCGCAGCGCCTATTTCATGGGCAGGC GAATATGGAAGGACTGAAAG
Downstream 100 bases:
>100_bases ACATCGACGCTGGAAAGTGGCGCTGCGCTTGCTTTATCACGGGTGCAAAGGCATATCGTGCCAAGACCCTGACGTGACAA AGGCCGCCTCGCCATGGCAG
Product: putative glutathione S-transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MGLLVDGKWEDVWYDTKSHGGAFKRSEAQFRNWLTADGSPGPDGQTGFKAENGRYHLYVSYACPWAHRTLIFRKLKGLED HISVSVVHPDMLDKGWEFKTDADGATGDALFGFDYMHQIYTKADPSYSGRVTVPVLWDKQENTIVSNESAEIIRMFNSAF DEITGNTLDFWPEELREPIETVNKRIYDTVNNGVYKSGFATSQEAYDAAVVPLFDSLDWLEDILSQHRYLMGEHLTEADW RLFTTLVRFDPVYHLHFKCNRRRIIDYPNLWAYTRELYQMPGVAETVVMPHIVRHYHYSHDTINPNRILPINPVLDWEAP HGRG
Sequences:
>Translated_324_residues MGLLVDGKWEDVWYDTKSHGGAFKRSEAQFRNWLTADGSPGPDGQTGFKAENGRYHLYVSYACPWAHRTLIFRKLKGLED HISVSVVHPDMLDKGWEFKTDADGATGDALFGFDYMHQIYTKADPSYSGRVTVPVLWDKQENTIVSNESAEIIRMFNSAF DEITGNTLDFWPEELREPIETVNKRIYDTVNNGVYKSGFATSQEAYDAAVVPLFDSLDWLEDILSQHRYLMGEHLTEADW RLFTTLVRFDPVYHLHFKCNRRRIIDYPNLWAYTRELYQMPGVAETVVMPHIVRHYHYSHDTINPNRILPINPVLDWEAP HGRG >Mature_323_residues GLLVDGKWEDVWYDTKSHGGAFKRSEAQFRNWLTADGSPGPDGQTGFKAENGRYHLYVSYACPWAHRTLIFRKLKGLEDH ISVSVVHPDMLDKGWEFKTDADGATGDALFGFDYMHQIYTKADPSYSGRVTVPVLWDKQENTIVSNESAEIIRMFNSAFD EITGNTLDFWPEELREPIETVNKRIYDTVNNGVYKSGFATSQEAYDAAVVPLFDSLDWLEDILSQHRYLMGEHLTEADWR LFTTLVRFDPVYHLHFKCNRRRIIDYPNLWAYTRELYQMPGVAETVVMPHIVRHYHYSHDTINPNRILPINPVLDWEAPH GRG
Specific function: Unknown
COG id: COG0435
COG function: function code O; Predicted glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1789489, Length=323, Percent_Identity=64.7058823529412, Blast_Score=409, Evalue=1e-115, Organism=Saccharomyces cerevisiae, GI6322929, Length=364, Percent_Identity=38.7362637362637, Blast_Score=214, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6323906, Length=366, Percent_Identity=36.0655737704918, Blast_Score=196, Evalue=6e-51, Organism=Saccharomyces cerevisiae, GI6321593, Length=337, Percent_Identity=32.0474777448071, Blast_Score=139, Evalue=8e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR016639 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C [H]
EC number: NA
Molecular weight: Translated: 37496; Mature: 37365
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLVDGKWEDVWYDTKSHGGAFKRSEAQFRNWLTADGSPGPDGQTGFKAENGRYHLYVS CCEEECCCCCCEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEE YACPWAHRTLIFRKLKGLEDHISVSVVHPDMLDKGWEFKTDADGATGDALFGFDYMHQIY EECCHHHHHHHHHHHCCCCHHEEEEEECCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH TKADPSYSGRVTVPVLWDKQENTIVSNESAEIIRMFNSAFDEITGNTLDFWPEELREPIE HCCCCCCCCEEEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH TVNKRIYDTVNNGVYKSGFATSQEAYDAAVVPLFDSLDWLEDILSQHRYLMGEHLTEADW HHHHHHHHHHCCCEECCCCCCCHHHHCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RLFTTLVRFDPVYHLHFKCNRRRIIDYPNLWAYTRELYQMPGVAETVVMPHIVRHYHYSH HHHHHHHHHCCEEEEEEEECCCEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC DTINPNRILPINPVLDWEAPHGRG CCCCCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure GLLVDGKWEDVWYDTKSHGGAFKRSEAQFRNWLTADGSPGPDGQTGFKAENGRYHLYVS CEEECCCCCCEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEE YACPWAHRTLIFRKLKGLEDHISVSVVHPDMLDKGWEFKTDADGATGDALFGFDYMHQIY EECCHHHHHHHHHHHCCCCHHEEEEEECCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH TKADPSYSGRVTVPVLWDKQENTIVSNESAEIIRMFNSAFDEITGNTLDFWPEELREPIE HCCCCCCCCEEEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH TVNKRIYDTVNNGVYKSGFATSQEAYDAAVVPLFDSLDWLEDILSQHRYLMGEHLTEADW HHHHHHHHHHCCCEECCCCCCCHHHHCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RLFTTLVRFDPVYHLHFKCNRRRIIDYPNLWAYTRELYQMPGVAETVVMPHIVRHYHYSH HHHHHHHHHCCEEEEEEEECCCEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC DTINPNRILPINPVLDWEAPHGRG CCCCCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]