Click here to switch to the map view.

The map label for this gene is yejB [H]

Identifier: 99082391

GI number: 99082391

Start: 2693730

End: 2694818

Strand: Reverse

Name: yejB [H]

Synonym: TM1040_2551

Alternate gene names: 99082391

Gene position: 2694818-2693730 (Counterclockwise)

Preceding gene: 99082392

Following gene: 99082390

Centisome position: 84.19

GC content: 55.92

Gene sequence:

>1089_bases
ATGTTAAACTATATTCTGCGGCGTCTTCTGCTGGTGATCCCGACACTGATCGGGATCATGGTAGTGAATTTCGCGCTCGT
GCAGTTTGTCCCCGGTGGACCGGTGGAGCAGATGATTGCCCGCCTTGAGGGCGGTGGCGATGTCTTTGGCGGCTTTGCTG
GGGCGGCGAATGATGCCGGGGCAGAGACCGTTGGTCAGGCCGAAAGCCAATACGCCGGGGCGCGGGGGCTGCCGCCTGAA
TTCATCGAGGAACTGGAGCGCGAGTTCGGCTTTGACAAACCTCCCCTCGAGCGGTTCCTCAACATGATGTGGAACTACGT
CCGGCTTGATTTCGGCGAGAGCTATTTTCGCAATATCGGCGTGATTGATCTGGTGCTCGAAAAGATGCCAGTGTCGATCT
CGCTGGGACTGTGGTCCACCCTCATTGCCTATCTGATCTCGATCCCGCTTGGTGTGAAAAAGGCGCTGCGCGATGGCAGC
AGCTTTGACAGTTGGACCAGTGGCGTGATCATCGCGGCCTATGCAATCCCGGGCTTCTTGTTTGCGATCCTCCTTCTTGT
GCTTCTGGCCGGGGGGTCATACTGGCAGATTTTCCCTCTAAGGGGCCTGACATCCGAGAATTGGGAAGAGCTGAGCCTTC
TGGGCAAGATCGGCGACTATTTCTGGCACATTACCTTGCCGGTGGTGGCCTCGACCATTTCGGCCTTTGCGACGCTCACC
TTGCTGACCAAGAACTCCTTTTTGGACGAGATCAAGAAACAGTATGTGATGACTGCCCGTGCCAAAGGGTTGACGGAAAA
CCGGGTGCTCTACGGGCATGTGTTTCGCAATGCGATGCTGATCGTGATTGCTGGTTTTCCGGGGGTGTTCATCTCGATCT
TTTTCACCGGCAGCCTGATCATCGAGACGATCTTCTCGCTCGACGGTCTCGGGCGGCTCGGGTTTGAGGCTGCGGTCGCG
CGTGACTACCCGATTGTATTTGGGACACTTTTCATCTTTGGTCTGATGGGCCTGGTGGTTGGGATCTTGTCAGACATTAT
GTATGTGCTGGTGGATCCACGCATCGACTTTGAAAAGCGGGAGGGATGA

Upstream 100 bases:

>100_bases
GAAATCCCGCCCTATAGCCTCGGGTATCTGGACTTCTGGTGGTATAACGAGGACAAGGCCAAAGCGCTGCGCGATGCTGG
CGCGCTGAGGTAAGCTCCCG

Downstream 100 bases:

>100_bases
TCTGATGGCCCTGTCTCCTCTCAATCAGCGGCGGTGGAACAACTTCAAACGCAACCGTCGCGCCCTGTGGTCGCTCAGGA
TCTTTTTGGTGCTGTTTGGC

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MLNYILRRLLLVIPTLIGIMVVNFALVQFVPGGPVEQMIARLEGGGDVFGGFAGAANDAGAETVGQAESQYAGARGLPPE
FIEELEREFGFDKPPLERFLNMMWNYVRLDFGESYFRNIGVIDLVLEKMPVSISLGLWSTLIAYLISIPLGVKKALRDGS
SFDSWTSGVIIAAYAIPGFLFAILLLVLLAGGSYWQIFPLRGLTSENWEELSLLGKIGDYFWHITLPVVASTISAFATLT
LLTKNSFLDEIKKQYVMTARAKGLTENRVLYGHVFRNAMLIVIAGFPGVFISIFFTGSLIIETIFSLDGLGRLGFEAAVA
RDYPIVFGTLFIFGLMGLVVGILSDIMYVLVDPRIDFEKREG

Sequences:

>Translated_362_residues
MLNYILRRLLLVIPTLIGIMVVNFALVQFVPGGPVEQMIARLEGGGDVFGGFAGAANDAGAETVGQAESQYAGARGLPPE
FIEELEREFGFDKPPLERFLNMMWNYVRLDFGESYFRNIGVIDLVLEKMPVSISLGLWSTLIAYLISIPLGVKKALRDGS
SFDSWTSGVIIAAYAIPGFLFAILLLVLLAGGSYWQIFPLRGLTSENWEELSLLGKIGDYFWHITLPVVASTISAFATLT
LLTKNSFLDEIKKQYVMTARAKGLTENRVLYGHVFRNAMLIVIAGFPGVFISIFFTGSLIIETIFSLDGLGRLGFEAAVA
RDYPIVFGTLFIFGLMGLVVGILSDIMYVLVDPRIDFEKREG
>Mature_362_residues
MLNYILRRLLLVIPTLIGIMVVNFALVQFVPGGPVEQMIARLEGGGDVFGGFAGAANDAGAETVGQAESQYAGARGLPPE
FIEELEREFGFDKPPLERFLNMMWNYVRLDFGESYFRNIGVIDLVLEKMPVSISLGLWSTLIAYLISIPLGVKKALRDGS
SFDSWTSGVIIAAYAIPGFLFAILLLVLLAGGSYWQIFPLRGLTSENWEELSLLGKIGDYFWHITLPVVASTISAFATLT
LLTKNSFLDEIKKQYVMTARAKGLTENRVLYGHVFRNAMLIVIAGFPGVFISIFFTGSLIIETIFSLDGLGRLGFEAAVA
RDYPIVFGTLFIFGLMGLVVGILSDIMYVLVDPRIDFEKREG

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=361, Percent_Identity=60.1108033240997, Blast_Score=441, Evalue=1e-125,
Organism=Escherichia coli, GI1789965, Length=375, Percent_Identity=32, Blast_Score=183, Evalue=1e-47,
Organism=Escherichia coli, GI1787497, Length=358, Percent_Identity=27.0949720670391, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1787053, Length=359, Percent_Identity=27.2980501392758, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1789888, Length=364, Percent_Identity=26.3736263736264, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1787550, Length=265, Percent_Identity=23.3962264150943, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787761, Length=353, Percent_Identity=23.2294617563739, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 39884; Mature: 39884

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNYILRRLLLVIPTLIGIMVVNFALVQFVPGGPVEQMIARLEGGGDVFGGFAGAANDAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
AETVGQAESQYAGARGLPPEFIEELEREFGFDKPPLERFLNMMWNYVRLDFGESYFRNIG
HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCC
VIDLVLEKMPVSISLGLWSTLIAYLISIPLGVKKALRDGSSFDSWTSGVIIAAYAIPGFL
HHHHHHHHCCCEEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHH
FAILLLVLLAGGSYWQIFPLRGLTSENWEELSLLGKIGDYFWHITLPVVASTISAFATLT
HHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLTKNSFLDEIKKQYVMTARAKGLTENRVLYGHVFRNAMLIVIAGFPGVFISIFFTGSLI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCEEEEEEECCHHHHHHHHHHHHHH
IETIFSLDGLGRLGFEAAVARDYPIVFGTLFIFGLMGLVVGILSDIMYVLVDPRIDFEKR
HHHHHHHCCCCHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
EG
CC
>Mature Secondary Structure
MLNYILRRLLLVIPTLIGIMVVNFALVQFVPGGPVEQMIARLEGGGDVFGGFAGAANDAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
AETVGQAESQYAGARGLPPEFIEELEREFGFDKPPLERFLNMMWNYVRLDFGESYFRNIG
HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCC
VIDLVLEKMPVSISLGLWSTLIAYLISIPLGVKKALRDGSSFDSWTSGVIIAAYAIPGFL
HHHHHHHHCCCEEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHH
FAILLLVLLAGGSYWQIFPLRGLTSENWEELSLLGKIGDYFWHITLPVVASTISAFATLT
HHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLTKNSFLDEIKKQYVMTARAKGLTENRVLYGHVFRNAMLIVIAGFPGVFISIFFTGSLI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCEEEEEEECCHHHHHHHHHHHHHH
IETIFSLDGLGRLGFEAAVARDYPIVFGTLFIFGLMGLVVGILSDIMYVLVDPRIDFEKR
HHHHHHHCCCCHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
EG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]