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The map label for this gene is rsmC [H]

Identifier: 99082373

GI number: 99082373

Start: 2673606

End: 2674592

Strand: Reverse

Name: rsmC [H]

Synonym: TM1040_2533

Alternate gene names: 99082373

Gene position: 2674592-2673606 (Counterclockwise)

Preceding gene: 99082374

Following gene: 99082372

Centisome position: 83.56

GC content: 59.88

Gene sequence:

>987_bases
ATGTCTCAACGCCTGAGCCTCGTGGTTCAATCAGGCGATTTTCGCGTTCCCGATGAGGGGCGAATCGCTGTTTTTCATCC
GCGCGAGGGGCATGATCTCTCTGATTTGCCAGATGCGCGGCTGGAGATCATCCAACCGCTGAAGCCCGAATATGACTATT
GGGCGGGGCGTGGTCTGACCTCTGTGGCGGAGGTTGCGGAAGATGCGACCTATGATGCCGCAGTGGTGTTCATTCCGCGC
TCAAAGCCCTTGGCTCGCCAACTCGTGGCGCAGGCTGTCGCGGCCACGCAGGGGCCGGTTTTGGTCGATGGTGCCAAGAC
TGACGGCATCGACTCGCTGCTGAAAGAGCTGAATAAGCGCACCCGTCCCAGTCATGCGATTTCCAAGGCGCATGGCAAGG
CGTTTTGCATTGAGGGCGGGATCGACCTCTCTGATTGGGTGCCAGGACCGAGTGAAGTAGACGGCGGATTTGTAACCGCG
CCGGGTGTGTTCTCTGCGGATGCCATCGACCCAGCCTCTGCTTTGTTGGCGCGGGCACTGCCCAAAAAGCTCGGCAAAGA
GGTGGCCGATCTTGGTGCGGGCTGGGGCTATCTCTCGGCTGAAATCCTGCGGCGCAGCAATTTGGAGACTTTGCATCTGG
TTGAGGCCGACCATGTCGCGCTGACCTGTGCGCAAACCAATGTCACCGATGCGCATGCTGAGTTTCACTGGGCCGATGCG
CGCAGCTGGGGCCAAAAGGGCAGTCTGGATGCGGTTGTCATGAACCCTCCGTTTCATAGCGGCCGCGCGGCTGAACCCTC
GTTGGGCCAAGCCTTCATTGCAAATGCGGCCCGTCTGCTGAAACCGGCAGGCCAGCTCTGGATGGTGGCCAATAGGCATC
TGCCTTATGAGGCCCTTCTTGGCGAGTGTTTCGTGTCCTTTGAGGAGGCGGCAGGCGACAACCGCTTCAAGATCCTGCAT
GGTGTTCGCCCGCGCCGCAAAGGTTAG

Upstream 100 bases:

>100_bases
GATGGATTATGCCCGTCGCCATCAGCATCCTTTGCAGTGCACCATGGAAAAAGACGACTGACCCGCGTCTGCGCGTCTGG
TCTGGGAAAGGTCTCTTCAC

Downstream 100 bases:

>100_bases
CGCGTAACCCAAGGTCAAGACGACGGGCAGGGATCAAAACCTGTTCAAATCTGAAAATCTTCGGGCTATCGTTTCGCCAG
AGTGCGCCACAGACGCGCGT

Product: methyltransferase small

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MSQRLSLVVQSGDFRVPDEGRIAVFHPREGHDLSDLPDARLEIIQPLKPEYDYWAGRGLTSVAEVAEDATYDAAVVFIPR
SKPLARQLVAQAVAATQGPVLVDGAKTDGIDSLLKELNKRTRPSHAISKAHGKAFCIEGGIDLSDWVPGPSEVDGGFVTA
PGVFSADAIDPASALLARALPKKLGKEVADLGAGWGYLSAEILRRSNLETLHLVEADHVALTCAQTNVTDAHAEFHWADA
RSWGQKGSLDAVVMNPPFHSGRAAEPSLGQAFIANAARLLKPAGQLWMVANRHLPYEALLGECFVSFEEAAGDNRFKILH
GVRPRRKG

Sequences:

>Translated_328_residues
MSQRLSLVVQSGDFRVPDEGRIAVFHPREGHDLSDLPDARLEIIQPLKPEYDYWAGRGLTSVAEVAEDATYDAAVVFIPR
SKPLARQLVAQAVAATQGPVLVDGAKTDGIDSLLKELNKRTRPSHAISKAHGKAFCIEGGIDLSDWVPGPSEVDGGFVTA
PGVFSADAIDPASALLARALPKKLGKEVADLGAGWGYLSAEILRRSNLETLHLVEADHVALTCAQTNVTDAHAEFHWADA
RSWGQKGSLDAVVMNPPFHSGRAAEPSLGQAFIANAARLLKPAGQLWMVANRHLPYEALLGECFVSFEEAAGDNRFKILH
GVRPRRKG
>Mature_327_residues
SQRLSLVVQSGDFRVPDEGRIAVFHPREGHDLSDLPDARLEIIQPLKPEYDYWAGRGLTSVAEVAEDATYDAAVVFIPRS
KPLARQLVAQAVAATQGPVLVDGAKTDGIDSLLKELNKRTRPSHAISKAHGKAFCIEGGIDLSDWVPGPSEVDGGFVTAP
GVFSADAIDPASALLARALPKKLGKEVADLGAGWGYLSAEILRRSNLETLHLVEADHVALTCAQTNVTDAHAEFHWADAR
SWGQKGSLDAVVMNPPFHSGRAAEPSLGQAFIANAARLLKPAGQLWMVANRHLPYEALLGECFVSFEEAAGDNRFKILHG
VRPRRKG

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=180, Percent_Identity=33.8888888888889, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI87082206, Length=269, Percent_Identity=27.5092936802974, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 35314; Mature: 35183

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQRLSLVVQSGDFRVPDEGRIAVFHPREGHDLSDLPDARLEIIQPLKPEYDYWAGRGLT
CCCCEEEEEECCCEECCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCHHCCCCHH
SVAEVAEDATYDAAVVFIPRSKPLARQLVAQAVAATQGPVLVDGAKTDGIDSLLKELNKR
HHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHH
TRPSHAISKAHGKAFCIEGGIDLSDWVPGPSEVDGGFVTAPGVFSADAIDPASALLARAL
CCCHHHHHHCCCCEEEEECCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHH
PKKLGKEVADLGAGWGYLSAEILRRSNLETLHLVEADHVALTCAQTNVTDAHAEFHWADA
HHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCCCEEEHHH
RSWGQKGSLDAVVMNPPFHSGRAAEPSLGQAFIANAARLLKPAGQLWMVANRHLPYEALL
HHCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH
GECFVSFEEAAGDNRFKILHGVRPRRKG
HHHHHHHHHHCCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
SQRLSLVVQSGDFRVPDEGRIAVFHPREGHDLSDLPDARLEIIQPLKPEYDYWAGRGLT
CCCEEEEEECCCEECCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCHHCCCCHH
SVAEVAEDATYDAAVVFIPRSKPLARQLVAQAVAATQGPVLVDGAKTDGIDSLLKELNKR
HHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHH
TRPSHAISKAHGKAFCIEGGIDLSDWVPGPSEVDGGFVTAPGVFSADAIDPASALLARAL
CCCHHHHHHCCCCEEEEECCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHH
PKKLGKEVADLGAGWGYLSAEILRRSNLETLHLVEADHVALTCAQTNVTDAHAEFHWADA
HHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCCCEEEHHH
RSWGQKGSLDAVVMNPPFHSGRAAEPSLGQAFIANAARLLKPAGQLWMVANRHLPYEALL
HHCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH
GECFVSFEEAAGDNRFKILHGVRPRRKG
HHHHHHHHHHCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA