| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is qor [H]
Identifier: 99082357
GI number: 99082357
Start: 2657069
End: 2658073
Strand: Reverse
Name: qor [H]
Synonym: TM1040_2517
Alternate gene names: 99082357
Gene position: 2658073-2657069 (Counterclockwise)
Preceding gene: 99082358
Following gene: 99082356
Centisome position: 83.04
GC content: 63.38
Gene sequence:
>1005_bases ATGACGTTAGAACTCCCGCAGACAATGCGCGCGATTGAAATCTCGGAATTTGGCGCGCCGAATGTGCTCAAGCTTGTGGA GCGCCCGGTGCCGTCCGCTGGCTATGGTCAGGTGGTGATCCGCGTTGCATATGCCGGAGTGAACCGGCCGGACGCCTTGC AGCGTGCCGGCGCCTACGCGCCGCCGAAAGGCGCGAGCGACCTACCTGGGCTGGAGGCCTCAGGCGAGATTGTCGCGCTG GGCGAAGGTGTAACCGGCTGGAATCTTGGTGATCGCGTCTGCGCCTTGCTGCCCGGCGGCGGTTACGCGGACTATGTCGC TACGCCAGCAGCCCATTGCCTGCCGGTTCCTAAAGGGCTGAGCCTCAAGGAAGCCGCCTGCCTGCCCGAGACCTGTTTCA CGGTTTGGTCGAATGTCGTCACGCGCGGCGGCCTTCGCGCCGGAGAGCGTTTCCTTGTGCATGGCGGGTCCTCGGGAATT GGCACCACCGCCATTCAGTTGGCGTCTGCGCTGGGGGCGCGGGTCTATGCCACCGCGGGGTCGGACGACAAATGCGCTGC CTGCGTCGGACTCGGGGCAGATGTCGCGATCAATTATCGCGATGAAGATTTTGTCGAGATCCTCAGGGCAGACGGGGGCG CACATCTTATTCTGGACATGGTGGGTGGGGACTACATCCCCCGCAACATTAAGGCGCTCGCGGATGATGGGCGGCTGGTC CACATTGCCTTTCTGCAAGGCCCAAAGGCGGAGCTGAATTTTGCGCAGATCATGGCGCGCCGTCTCACGGTCACGGGATC AACTCTCCGTCCCCAAAGCGACCTCGCCAAGGCGCGCATCGCCCGGGATCTGCTGGAGGCCGTTTGGCCGCTGATCGAGG CTGGAAAACTGCGCCCCGTGATGGACTCGACCTTCGCATTGGCGGAGGCCGCCATTGCACATGCGCGCATGGAGGGATCG ACCCATATCGGAAAAATCGTGCTGGAGGTCGCAGGCGCCGACTGA
Upstream 100 bases:
>100_bases GGGTGGCCCGCGCGCGGGGCGCGGCGAGAGTTTGCATGGCTTGGCCGATTGAAGCGGGGATGCTAGGTCTCTGGGCAACA GATAGCAGAGGACCGTTCCG
Downstream 100 bases:
>100_bases CGCGCTGGAGATACAGCTGCTGGCGTTTATCCGATCATTTGTCGATTTTTTATCGGCGAGAGGGGGCAAGTCCCTAGCCA AGAGCATTCTTCTTGCTTCA
Product: zinc-binding alcohol dehydrogenase
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MTLELPQTMRAIEISEFGAPNVLKLVERPVPSAGYGQVVIRVAYAGVNRPDALQRAGAYAPPKGASDLPGLEASGEIVAL GEGVTGWNLGDRVCALLPGGGYADYVATPAAHCLPVPKGLSLKEAACLPETCFTVWSNVVTRGGLRAGERFLVHGGSSGI GTTAIQLASALGARVYATAGSDDKCAACVGLGADVAINYRDEDFVEILRADGGAHLILDMVGGDYIPRNIKALADDGRLV HIAFLQGPKAELNFAQIMARRLTVTGSTLRPQSDLAKARIARDLLEAVWPLIEAGKLRPVMDSTFALAEAAIAHARMEGS THIGKIVLEVAGAD
Sequences:
>Translated_334_residues MTLELPQTMRAIEISEFGAPNVLKLVERPVPSAGYGQVVIRVAYAGVNRPDALQRAGAYAPPKGASDLPGLEASGEIVAL GEGVTGWNLGDRVCALLPGGGYADYVATPAAHCLPVPKGLSLKEAACLPETCFTVWSNVVTRGGLRAGERFLVHGGSSGI GTTAIQLASALGARVYATAGSDDKCAACVGLGADVAINYRDEDFVEILRADGGAHLILDMVGGDYIPRNIKALADDGRLV HIAFLQGPKAELNFAQIMARRLTVTGSTLRPQSDLAKARIARDLLEAVWPLIEAGKLRPVMDSTFALAEAAIAHARMEGS THIGKIVLEVAGAD >Mature_333_residues TLELPQTMRAIEISEFGAPNVLKLVERPVPSAGYGQVVIRVAYAGVNRPDALQRAGAYAPPKGASDLPGLEASGEIVALG EGVTGWNLGDRVCALLPGGGYADYVATPAAHCLPVPKGLSLKEAACLPETCFTVWSNVVTRGGLRAGERFLVHGGSSGIG TTAIQLASALGARVYATAGSDDKCAACVGLGADVAINYRDEDFVEILRADGGAHLILDMVGGDYIPRNIKALADDGRLVH IAFLQGPKAELNFAQIMARRLTVTGSTLRPQSDLAKARIARDLLEAVWPLIEAGKLRPVMDSTFALAEAAIAHARMEGST HIGKIVLEVAGAD
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI22538446, Length=332, Percent_Identity=39.1566265060241, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI22538444, Length=332, Percent_Identity=39.1566265060241, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI194239674, Length=330, Percent_Identity=29.0909090909091, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI13236495, Length=330, Percent_Identity=29.0909090909091, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI24308257, Length=344, Percent_Identity=27.906976744186, Blast_Score=126, Evalue=3e-29, Organism=Homo sapiens, GI194239676, Length=327, Percent_Identity=28.4403669724771, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI28557745, Length=266, Percent_Identity=31.5789473684211, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI18379349, Length=342, Percent_Identity=26.9005847953216, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI41872631, Length=307, Percent_Identity=30.2931596091205, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI47519420, Length=354, Percent_Identity=28.2485875706215, Blast_Score=96, Evalue=7e-20, Organism=Homo sapiens, GI197927207, Length=188, Percent_Identity=27.6595744680851, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1790485, Length=324, Percent_Identity=28.7037037037037, Blast_Score=100, Evalue=9e-23, Organism=Caenorhabditis elegans, GI17507255, Length=328, Percent_Identity=28.9634146341463, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI212642053, Length=336, Percent_Identity=26.4880952380952, Blast_Score=73, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71987554, Length=366, Percent_Identity=25.4098360655738, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71988145, Length=307, Percent_Identity=20.5211726384365, Blast_Score=69, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6319520, Length=340, Percent_Identity=27.9411764705882, Blast_Score=107, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6323961, Length=319, Percent_Identity=26.0188087774295, Blast_Score=87, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6319621, Length=361, Percent_Identity=23.2686980609418, Blast_Score=70, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6323729, Length=351, Percent_Identity=22.5071225071225, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI24581345, Length=321, Percent_Identity=27.1028037383178, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI19920632, Length=298, Percent_Identity=26.8456375838926, Blast_Score=85, Evalue=6e-17, Organism=Drosophila melanogaster, GI221330659, Length=298, Percent_Identity=26.8456375838926, Blast_Score=85, Evalue=6e-17, Organism=Drosophila melanogaster, GI24581339, Length=365, Percent_Identity=27.6712328767123, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24581341, Length=365, Percent_Identity=27.6712328767123, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 34858; Mature: 34727
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLELPQTMRAIEISEFGAPNVLKLVERPVPSAGYGQVVIRVAYAGVNRPDALQRAGAYA CCCCCCHHHHHEEHHHCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCCC PPKGASDLPGLEASGEIVALGEGVTGWNLGDRVCALLPGGGYADYVATPAAHCLPVPKGL CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCHHHHHCCHHHHCCCCCCC SLKEAACLPETCFTVWSNVVTRGGLRAGERFLVHGGSSGIGTTAIQLASALGARVYATAG CHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCEEEEECC SDDKCAACVGLGADVAINYRDEDFVEILRADGGAHLILDMVGGDYIPRNIKALADDGRLV CCCCCEEEEECCCCEEEECCCHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHCCCCCEE HIAFLQGPKAELNFAQIMARRLTVTGSTLRPQSDLAKARIARDLLEAVWPLIEAGKLRPV EEEEECCCCCCCCHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH MDSTFALAEAAIAHARMEGSTHIGKIVLEVAGAD HHHHHHHHHHHHHHHHCCCCCHHEEEEEEEECCC >Mature Secondary Structure TLELPQTMRAIEISEFGAPNVLKLVERPVPSAGYGQVVIRVAYAGVNRPDALQRAGAYA CCCCCHHHHHEEHHHCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCCC PPKGASDLPGLEASGEIVALGEGVTGWNLGDRVCALLPGGGYADYVATPAAHCLPVPKGL CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCHHHHHCCHHHHCCCCCCC SLKEAACLPETCFTVWSNVVTRGGLRAGERFLVHGGSSGIGTTAIQLASALGARVYATAG CHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCEEEEECC SDDKCAACVGLGADVAINYRDEDFVEILRADGGAHLILDMVGGDYIPRNIKALADDGRLV CCCCCEEEEECCCCEEEECCCHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHCCCCCEE HIAFLQGPKAELNFAQIMARRLTVTGSTLRPQSDLAKARIARDLLEAVWPLIEAGKLRPV EEEEECCCCCCCCHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH MDSTFALAEAAIAHARMEGSTHIGKIVLEVAGAD HHHHHHHHHHHHHHHHCCCCCHHEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]