Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is cya3 [H]

Identifier: 99082352

GI number: 99082352

Start: 2653223

End: 2654206

Strand: Direct

Name: cya3 [H]

Synonym: TM1040_2512

Alternate gene names: 99082352

Gene position: 2653223-2654206 (Clockwise)

Preceding gene: 99082349

Following gene: 99082359

Centisome position: 82.89

GC content: 61.59

Gene sequence:

>984_bases
ATGCATGATCGCATCACCCGCAAATTGACAACGATCCTGGCCGCGGATGCCGAGCAATTCAGTGCGGCGATGACAACCGA
TGAGGTAGGCACCTATACGGAGCTGCAGTCGGCGCGCGATGTGTTTTTCAAGCTGATCGAACGCCACGGCGGGCGGGTCG
CCAATACCGCAGGCGACGGGCTGATTGCCGACTTCCCCTCGGTTGTCGAGGCGGTGCAATGTGCGATCGAGGTTCAGCAG
GAGCTTGCCGCCAAGGACAGCGCCCTCTCCTTTCGGATCGGCGTAAATCTGGGCGATGTGATCTGTGATGGCGAGGATCT
GATTGGCGAGGGCGTGAACCTCGCAGCCCGCTTGCAAACGATGGCAGAACCGGGTGGCGTCCTGATCTCGCAACAGGTCT
ATGACCACGTCAAGAACAAGCTCTCCATCGGGTTTGAGTATCTGGGGGATCGCAGGCCACGCAACCTTCCCGAAGATGTC
GCAGTCTATCGCATCTCTTTGGGCGCACCGCGCCCGAGCCGCGCCAGCCATCCACGCAGCAGCGCGCAGGTATGGTCGGA
CCCCGATCCGTTTGCCGACGCGCCTCAGCGTGACTATGGGCTGACGGATGACGCTGAGGACCCAGAAGAGGTGCCCCTGC
GCGGGCTGGATCGGCTCGTTGGCCGCCGCCTGCCGCTAAGCAAGCGCAGCAAGACACTGGTGCTTGTCGCAGCCGGGCTT
TTTGTGATCGACCTTGCCTCAGGACGGGGAATCTGGGCGCACTGGCCGCTGCTGGTGATCGCAATGGTGATCGGGTTGCG
AGACGGGCCGCGCCTGCTTGGACGCACGGAGTTTCGTGGCATCCCGGTCAAACTATGTGTGATCGCAGCCTTTCTGCTAC
TGGTGAACCTTTTCAGCTGGCAGGGCGTCATGTGGTCCCTCTGGCCAATTGGAGGGATGGCTGCCTATTCTCTCCTGAAG
CGACGCTGGTCAGAAGCCGAGTGA

Upstream 100 bases:

>100_bases
TCATTGTCGCCAAAGCTGTGCTGTCATTGGAAACCGCAAACCCCTTGCATGCGGCGGCGCGAAAGCCCACTTTGGGCCTG
TATTCATTTGGGCCCTTGCT

Downstream 100 bases:

>100_bases
GGCCACTGCCCTGTGCGGACCTAGCACCGCTCTTGAAGAATTATCAGGATATAAAAACAAGAAACCCGCCGAATTGCTTC
GGCGGGTTCAATCCGTTTGG

Product: putative adenylate/guanylate cyclase

Products: NA

Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MHDRITRKLTTILAADAEQFSAAMTTDEVGTYTELQSARDVFFKLIERHGGRVANTAGDGLIADFPSVVEAVQCAIEVQQ
ELAAKDSALSFRIGVNLGDVICDGEDLIGEGVNLAARLQTMAEPGGVLISQQVYDHVKNKLSIGFEYLGDRRPRNLPEDV
AVYRISLGAPRPSRASHPRSSAQVWSDPDPFADAPQRDYGLTDDAEDPEEVPLRGLDRLVGRRLPLSKRSKTLVLVAAGL
FVIDLASGRGIWAHWPLLVIAMVIGLRDGPRLLGRTEFRGIPVKLCVIAAFLLLVNLFSWQGVMWSLWPIGGMAAYSLLK
RRWSEAE

Sequences:

>Translated_327_residues
MHDRITRKLTTILAADAEQFSAAMTTDEVGTYTELQSARDVFFKLIERHGGRVANTAGDGLIADFPSVVEAVQCAIEVQQ
ELAAKDSALSFRIGVNLGDVICDGEDLIGEGVNLAARLQTMAEPGGVLISQQVYDHVKNKLSIGFEYLGDRRPRNLPEDV
AVYRISLGAPRPSRASHPRSSAQVWSDPDPFADAPQRDYGLTDDAEDPEEVPLRGLDRLVGRRLPLSKRSKTLVLVAAGL
FVIDLASGRGIWAHWPLLVIAMVIGLRDGPRLLGRTEFRGIPVKLCVIAAFLLLVNLFSWQGVMWSLWPIGGMAAYSLLK
RRWSEAE
>Mature_327_residues
MHDRITRKLTTILAADAEQFSAAMTTDEVGTYTELQSARDVFFKLIERHGGRVANTAGDGLIADFPSVVEAVQCAIEVQQ
ELAAKDSALSFRIGVNLGDVICDGEDLIGEGVNLAARLQTMAEPGGVLISQQVYDHVKNKLSIGFEYLGDRRPRNLPEDV
AVYRISLGAPRPSRASHPRSSAQVWSDPDPFADAPQRDYGLTDDAEDPEEVPLRGLDRLVGRRLPLSKRSKTLVLVAAGL
FVIDLASGRGIWAHWPLLVIAMVIGLRDGPRLLGRTEFRGIPVKLCVIAAFLLLVNLFSWQGVMWSLWPIGGMAAYSLLK
RRWSEAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]

EC number: =4.6.1.1 [H]

Molecular weight: Translated: 35885; Mature: 35885

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS50125 GUANYLATE_CYCLASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDRITRKLTTILAADAEQFSAAMTTDEVGTYTELQSARDVFFKLIERHGGRVANTAGDG
CCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCC
LIADFPSVVEAVQCAIEVQQELAAKDSALSFRIGVNLGDVICDGEDLIGEGVNLAARLQT
CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCHHHHCCCCHHHHHHHH
MAEPGGVLISQQVYDHVKNKLSIGFEYLGDRRPRNLPEDVAVYRISLGAPRPSRASHPRS
HCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEECCCCCCCCCCCCCC
SAQVWSDPDPFADAPQRDYGLTDDAEDPEEVPLRGLDRLVGRRLPLSKRSKTLVLVAAGL
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCEEEEEECCC
FVIDLASGRGIWAHWPLLVIAMVIGLRDGPRLLGRTEFRGIPVKLCVIAAFLLLVNLFSW
CEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
QGVMWSLWPIGGMAAYSLLKRRWSEAE
CCCHHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHDRITRKLTTILAADAEQFSAAMTTDEVGTYTELQSARDVFFKLIERHGGRVANTAGDG
CCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCC
LIADFPSVVEAVQCAIEVQQELAAKDSALSFRIGVNLGDVICDGEDLIGEGVNLAARLQT
CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCHHHHCCCCHHHHHHHH
MAEPGGVLISQQVYDHVKNKLSIGFEYLGDRRPRNLPEDVAVYRISLGAPRPSRASHPRS
HCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEECCCCCCCCCCCCCC
SAQVWSDPDPFADAPQRDYGLTDDAEDPEEVPLRGLDRLVGRRLPLSKRSKTLVLVAAGL
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCEEEEEECCC
FVIDLASGRGIWAHWPLLVIAMVIGLRDGPRLLGRTEFRGIPVKLCVIAAFLLLVNLFSW
CEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
QGVMWSLWPIGGMAAYSLLKRRWSEAE
CCCHHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10485295; 11481432 [H]