| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082344
Identifier: 99082344
GI number: 99082344
Start: 2646341
End: 2646700
Strand: Direct
Name: 99082344
Synonym: TM1040_2504
Alternate gene names: NA
Gene position: 2646341-2646700 (Clockwise)
Preceding gene: 99082343
Following gene: 99082348
Centisome position: 82.67
GC content: 60.0
Gene sequence:
>360_bases ATGCTGAGATATGTCCTGATCCCGTTCTTGGGCCTGGCCGGCCCATTTGCTGCCCATGCTGCAGATCCCGTCATCGAACA GGCGACCGCAGAGCCGAGCGGCGACACGTGGCGTTTTTCAGTTACGATCTCCCACCCCGATACCGGTTGGGAGCATTACG CGGACGGTTGGCGCGTGCTTGATATGGCGGGTAACGAACTCGGGCTGCGCGTGCTGGCCCATCCGCATGTGAATGAGCAA CCCTTCACACGATCGCTTGCAGGTGTACGTCTTCCTGCGGGCACCACACAGGTGCAAATTCAGGCACGCTGCAATCTCGA CGGATGGGCTGCCACAACAACCGTGATCGACCTGCACTGA
Upstream 100 bases:
>100_bases TTTCCCGGTCACGTCGCATCCTGATGCAATCAAAACCCGAAACCACGTCGCCCACCGAATTGTGACCTGCACAGGTCGCA ACATCGGCTAGACTGGCCCC
Downstream 100 bases:
>100_bases CCAGATCAGACCCGGTGATAGGGACTGCCCGAGAGGATCGTGGCGGAGCGATAGACCTGCTCAGCCAGCATCAGGCGCAC CATCATGTGTGGCCAGACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MLRYVLIPFLGLAGPFAAHAADPVIEQATAEPSGDTWRFSVTISHPDTGWEHYADGWRVLDMAGNELGLRVLAHPHVNEQ PFTRSLAGVRLPAGTTQVQIQARCNLDGWAATTTVIDLH
Sequences:
>Translated_119_residues MLRYVLIPFLGLAGPFAAHAADPVIEQATAEPSGDTWRFSVTISHPDTGWEHYADGWRVLDMAGNELGLRVLAHPHVNEQ PFTRSLAGVRLPAGTTQVQIQARCNLDGWAATTTVIDLH >Mature_119_residues MLRYVLIPFLGLAGPFAAHAADPVIEQATAEPSGDTWRFSVTISHPDTGWEHYADGWRVLDMAGNELGLRVLAHPHVNEQ PFTRSLAGVRLPAGTTQVQIQARCNLDGWAATTTVIDLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12983; Mature: 12983
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRYVLIPFLGLAGPFAAHAADPVIEQATAEPSGDTWRFSVTISHPDTGWEHYADGWRVL CCEEEEEEHHCCCCCCHHCCCCCHHHHHCCCCCCCEEEEEEEEECCCCCCCHHCCCEEEE DMAGNELGLRVLAHPHVNEQPFTRSLAGVRLPAGTTQVQIQARCNLDGWAATTTVIDLH EECCCCCCEEEEECCCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCCCEEEEEEEEEC >Mature Secondary Structure MLRYVLIPFLGLAGPFAAHAADPVIEQATAEPSGDTWRFSVTISHPDTGWEHYADGWRVL CCEEEEEEHHCCCCCCHHCCCCCHHHHHCCCCCCCEEEEEEEEECCCCCCCHHCCCEEEE DMAGNELGLRVLAHPHVNEQPFTRSLAGVRLPAGTTQVQIQARCNLDGWAATTTVIDLH EECCCCCCEEEEECCCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA