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The map label for this gene is 99082249

Identifier: 99082249

GI number: 99082249

Start: 2548100

End: 2549374

Strand: Reverse

Name: 99082249

Synonym: TM1040_2409

Alternate gene names: NA

Gene position: 2549374-2548100 (Counterclockwise)

Preceding gene: 99082250

Following gene: 99082247

Centisome position: 79.64

GC content: 61.18

Gene sequence:

>1275_bases
ATGGCGTCTATCTATTCCATTGCAGATTTCATCGACATGCTGCGCCGCCGTGTGTCGCTGATCGTTGTCGTCACATTTCT
GGGCTGTGTGGTGTCGGTCTGGCTGGCGCTGCAGAAGCAGCCGATCTATTCCAGCACCGAAGTGATCCAGATTACCCGTC
CAAAGATTGCCGGAGATCTGGCGCGCTCGACTGCGGAGGGGTCCTCTGCACGACGTATCCAATTGATCGAACAACAGCTG
ATGGCGCGCGGAACGATCCTAGAAATCGTGGATCAGCTTGACCTCTTTGCGGACCGTCCCGGGCTTCTGGATTCCGAAAT
TGTCCCCCTGATGCGCAACTCTGTTTCTTTGATGGGGACCGCCGCGGCCCGCGAAGGCGGGTCCGACGATGGCGCGATCT
CGGTGCTTACGATCACCGCGAATATGCCGACCCGCGAGCAAGCGCAGGCCGTCGCGCGCGAATTTTCCAAGCGCACCATT
GCCCTCAGCCAGAACACCCGGCTCGCCGAGGCGCGCGAAACCTTGCTCTTTTTCAATGAAAAAGAAGCGGCATTGGTGCG
TGACATCACGGCGCTTGAGGAAGAGATTGCCAACTTCAGGCACGAGAACGCCGTGACCTTGCCCGGTGCAATCGAGATGC
GAGGCGCGGAAATTACGGCGATCAATGAAAGCCTGCTGGAACTCGCGCGACAAGAGATCGAATTGCGCAAAGGTGCTGAG
GAGGCCGAGGCAACACAACGTGAAGCCTATGCGCGCCGGGTTCGCGAAGAGTTCGACGCCCAGCTCGAAAGCTTGACAGC
GCAGCGCCAGCTGCTTGTGGATCGCCGCGCCGAACTGGAGGCGTCTCTCGAGCTCACCCCGGACGTGGATCGCCAATTGG
CCAGCTATGAGCGGCGTCAACAGCAGATGCAGTCCGAGCTTGAAGTCATCACCGCGCGTCGCGCCGAGGCCGAGGTCGGG
TTCCGACTGGAGACCGCCAGTCAAGGCGAGCGTCTGCGGGTGATCGAGCCCGCACCGCTGCCGGATTATGCGATGGGCGG
TGGCCGCAAGTCTTTGGCGATCAAGGGCGCCCTTGCGAGCTTTGTCTTGGGGGTTCTTGCGGCCTTTGCCCTAGACTTGC
GCCATCCGGTTCTGCGGTCGAGCGGGCAGATGAAGCGGGAAACCGGCCTGTCCCCGGTGGTGACGATCCCGGTTCTGACG
ACGCGCAAAAAAGGTCTGTTTGCACGCCTCTTTGCGCTGGGCGGACGCGGCACGGAACGGCACGCGCGTAGCTAG

Upstream 100 bases:

>100_bases
CACCCAGCTTCTCGGGGTGGTTTTGAACCGTGCCCGCAACGAGGATGAGTTTTCCGGCGGCGCCTGAAACGGCTCGCGGG
AAAAGAGGACAGATTTCGAT

Downstream 100 bases:

>100_bases
GCATTTGGTTACATGACCCCGACACTGGCTGCGATTTTGGGCCAGTGGTACCAGAGTGCGCTCCCACACATCACGAGGCT
GGCGGTCAGATAGACCAGAT

Product: lipopolysaccharide biosynthesis

Products: NA

Alternate protein names: Lipopolysaccharide Biosynthesis Protein; Polysaccharide Chain Length Determinant Protein; Chain Length Determinant Protein

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MASIYSIADFIDMLRRRVSLIVVVTFLGCVVSVWLALQKQPIYSSTEVIQITRPKIAGDLARSTAEGSSARRIQLIEQQL
MARGTILEIVDQLDLFADRPGLLDSEIVPLMRNSVSLMGTAAAREGGSDDGAISVLTITANMPTREQAQAVAREFSKRTI
ALSQNTRLAEARETLLFFNEKEAALVRDITALEEEIANFRHENAVTLPGAIEMRGAEITAINESLLELARQEIELRKGAE
EAEATQREAYARRVREEFDAQLESLTAQRQLLVDRRAELEASLELTPDVDRQLASYERRQQQMQSELEVITARRAEAEVG
FRLETASQGERLRVIEPAPLPDYAMGGGRKSLAIKGALASFVLGVLAAFALDLRHPVLRSSGQMKRETGLSPVVTIPVLT
TRKKGLFARLFALGGRGTERHARS

Sequences:

>Translated_424_residues
MASIYSIADFIDMLRRRVSLIVVVTFLGCVVSVWLALQKQPIYSSTEVIQITRPKIAGDLARSTAEGSSARRIQLIEQQL
MARGTILEIVDQLDLFADRPGLLDSEIVPLMRNSVSLMGTAAAREGGSDDGAISVLTITANMPTREQAQAVAREFSKRTI
ALSQNTRLAEARETLLFFNEKEAALVRDITALEEEIANFRHENAVTLPGAIEMRGAEITAINESLLELARQEIELRKGAE
EAEATQREAYARRVREEFDAQLESLTAQRQLLVDRRAELEASLELTPDVDRQLASYERRQQQMQSELEVITARRAEAEVG
FRLETASQGERLRVIEPAPLPDYAMGGGRKSLAIKGALASFVLGVLAAFALDLRHPVLRSSGQMKRETGLSPVVTIPVLT
TRKKGLFARLFALGGRGTERHARS
>Mature_423_residues
ASIYSIADFIDMLRRRVSLIVVVTFLGCVVSVWLALQKQPIYSSTEVIQITRPKIAGDLARSTAEGSSARRIQLIEQQLM
ARGTILEIVDQLDLFADRPGLLDSEIVPLMRNSVSLMGTAAAREGGSDDGAISVLTITANMPTREQAQAVAREFSKRTIA
LSQNTRLAEARETLLFFNEKEAALVRDITALEEEIANFRHENAVTLPGAIEMRGAEITAINESLLELARQEIELRKGAEE
AEATQREAYARRVREEFDAQLESLTAQRQLLVDRRAELEASLELTPDVDRQLASYERRQQQMQSELEVITARRAEAEVGF
RLETASQGERLRVIEPAPLPDYAMGGGRKSLAIKGALASFVLGVLAAFALDLRHPVLRSSGQMKRETGLSPVVTIPVLTT
RKKGLFARLFALGGRGTERHARS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46835; Mature: 46704

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASIYSIADFIDMLRRRVSLIVVVTFLGCVVSVWLALQKQPIYSSTEVIQITRPKIAGDL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHH
ARSTAEGSSARRIQLIEQQLMARGTILEIVDQLDLFADRPGLLDSEIVPLMRNSVSLMGT
HHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHH
AAAREGGSDDGAISVLTITANMPTREQAQAVAREFSKRTIALSQNTRLAEARETLLFFNE
HHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHEECC
KEAALVRDITALEEEIANFRHENAVTLPGAIEMRGAEITAINESLLELARQEIELRKGAE
CHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEECCCEEEHHHHHHHHHHHHHHHHHCCCH
EAEATQREAYARRVREEFDAQLESLTAQRQLLVDRRAELEASLELTPDVDRQLASYERRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHH
QQMQSELEVITARRAEAEVGFRLETASQGERLRVIEPAPLPDYAMGGGRKSLAIKGALAS
HHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
FVLGVLAAFALDLRHPVLRSSGQMKRETGLSPVVTIPVLTTRKKGLFARLFALGGRGTER
HHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCC
HARS
CCCC
>Mature Secondary Structure 
ASIYSIADFIDMLRRRVSLIVVVTFLGCVVSVWLALQKQPIYSSTEVIQITRPKIAGDL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHH
ARSTAEGSSARRIQLIEQQLMARGTILEIVDQLDLFADRPGLLDSEIVPLMRNSVSLMGT
HHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHH
AAAREGGSDDGAISVLTITANMPTREQAQAVAREFSKRTIALSQNTRLAEARETLLFFNE
HHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHEECC
KEAALVRDITALEEEIANFRHENAVTLPGAIEMRGAEITAINESLLELARQEIELRKGAE
CHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEECCCEEEHHHHHHHHHHHHHHHHHCCCH
EAEATQREAYARRVREEFDAQLESLTAQRQLLVDRRAELEASLELTPDVDRQLASYERRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHH
QQMQSELEVITARRAEAEVGFRLETASQGERLRVIEPAPLPDYAMGGGRKSLAIKGALAS
HHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
FVLGVLAAFALDLRHPVLRSSGQMKRETGLSPVVTIPVLTTRKKGLFARLFALGGRGTER
HHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCC
HARS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA