| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is yuaD [H]
Identifier: 99082199
GI number: 99082199
Start: 2480493
End: 2481074
Strand: Reverse
Name: yuaD [H]
Synonym: TM1040_2359
Alternate gene names: 99082199
Gene position: 2481074-2480493 (Counterclockwise)
Preceding gene: 99082200
Following gene: 99082198
Centisome position: 77.51
GC content: 62.2
Gene sequence:
>582_bases ATGCCGGTATTACGCGAAACCCAATTCAGCGCAGAGATCACTTGGTTGGGGATGGTTCCCGCCGATACAGGTATTCAGGC GCAGCCCCGCACTGAGTTGGATCTGCTGTTCAGTGGCGTCGCAGGCGAGCGGCACGAAGGGGCCCAGCGTCCCTCCTGTG TGCGGGTCAAGAACCTCTATGTCCCCGGCACCGAGATCCGCAATACGCGCCAACTGACGATTCTCTCCGAAGAGGAACTC GCGCTGATCGCGGCAGAGATGGGGCTTGAGGCGCTTGACCCGCGGTATCTCGGCGCAACAGTCGTGCTGCGCGGTATTCC CGACCTGACCCACCTGCCGCCTGCGTCGCGCCTGCAGGGCAAAAATGGGGTCACGATCACCGTCGACATCGAGAATCGTC CCTGCATCCTGCCCGGTCGCGAGATCGAGAAAGACCACACAGGCTTTGGCCCGAAATTTAAAACCGCCGCCGAAAATCGC CGCGGCGTGACCGCTTGGGTCGAACGCCCCGGTCGGCTCGCTCTTGGTGATCAGATGCGTCTTTTTGTGCCCGACCAGCC CGCTTGGGCGGCAGAGCGCTAA
Upstream 100 bases:
>100_bases GGGTCAGAGACGACGCGCACGGGGCGGTCGGTCAATGGCTTGTTGCTCTTGAAACTTCGTCTAGACTGCCGACAAAATTT GACAGCAGGACGTGAGCATC
Downstream 100 bases:
>100_bases GGGTGCGACCCTCAGGCTTCGGTGTTAGCGATCAGCGTGCGAATACGAAGAGCGACGTTCTGGATCGCAATTATGTCGGA AACCAATGGCGCGGTTTGTT
Product: MOSC domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MPVLRETQFSAEITWLGMVPADTGIQAQPRTELDLLFSGVAGERHEGAQRPSCVRVKNLYVPGTEIRNTRQLTILSEEEL ALIAAEMGLEALDPRYLGATVVLRGIPDLTHLPPASRLQGKNGVTITVDIENRPCILPGREIEKDHTGFGPKFKTAAENR RGVTAWVERPGRLALGDQMRLFVPDQPAWAAER
Sequences:
>Translated_193_residues MPVLRETQFSAEITWLGMVPADTGIQAQPRTELDLLFSGVAGERHEGAQRPSCVRVKNLYVPGTEIRNTRQLTILSEEEL ALIAAEMGLEALDPRYLGATVVLRGIPDLTHLPPASRLQGKNGVTITVDIENRPCILPGREIEKDHTGFGPKFKTAAENR RGVTAWVERPGRLALGDQMRLFVPDQPAWAAER >Mature_192_residues PVLRETQFSAEITWLGMVPADTGIQAQPRTELDLLFSGVAGERHEGAQRPSCVRVKNLYVPGTEIRNTRQLTILSEEELA LIAAEMGLEALDPRYLGATVVLRGIPDLTHLPPASRLQGKNGVTITVDIENRPCILPGREIEKDHTGFGPKFKTAAENRR GVTAWVERPGRLALGDQMRLFVPDQPAWAAER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 MOSC domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005302 - InterPro: IPR015808 - InterPro: IPR011037 [H]
Pfam domain/function: PF03473 MOSC [H]
EC number: NA
Molecular weight: Translated: 21299; Mature: 21168
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVLRETQFSAEITWLGMVPADTGIQAQPRTELDLLFSGVAGERHEGAQRPSCVRVKNLY CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEE VPGTEIRNTRQLTILSEEELALIAAEMGLEALDPRYLGATVVLRGIPDLTHLPPASRLQG CCCCCCCCCEEEEEECCCCEEEEHHHCCHHHCCCCCCCEEEEEECCCCCCCCCCHHHCCC KNGVTITVDIENRPCILPGREIEKDHTGFGPKFKTAAENRRGVTAWVERPGRLALGDQMR CCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCEE LFVPDQPAWAAER EEECCCCCCCCCC >Mature Secondary Structure PVLRETQFSAEITWLGMVPADTGIQAQPRTELDLLFSGVAGERHEGAQRPSCVRVKNLY CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEE VPGTEIRNTRQLTILSEEELALIAAEMGLEALDPRYLGATVVLRGIPDLTHLPPASRLQG CCCCCCCCCEEEEEECCCCEEEEHHHCCHHHCCCCCCCEEEEEECCCCCCCCCCHHHCCC KNGVTITVDIENRPCILPGREIEKDHTGFGPKFKTAAENRRGVTAWVERPGRLALGDQMR CCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCEE LFVPDQPAWAAER EEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]