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The map label for this gene is 99082190

Identifier: 99082190

GI number: 99082190

Start: 2471775

End: 2472743

Strand: Direct

Name: 99082190

Synonym: TM1040_2350

Alternate gene names: NA

Gene position: 2471775-2472743 (Clockwise)

Preceding gene: 99082189

Following gene: 99082191

Centisome position: 77.22

GC content: 58.41

Gene sequence:

>969_bases
ATGGAATTCGGGATTGAACCGCTTATCTACGGGCTGATCTTCATCGGCGTCCTGGTGCTGGTCGAAGGCATCTATCTGGT
TGCCTTTGGCAAATCCATCAGCCTCAACAGCCGGGTGAACCGTCGCCTCGAGATGCTGGAAAAGGGCGGCAACCGGGAAC
AGGTGCTTGAGCAACTCCGCAAGGAGATGCAGCAGCACCTCAAATCTCAGTCTATCCCACTCTATTCCCTGCTGGCCGAG
AAGGCGCAGAAGGCGGCCATCGCCTTTACACCGATCCAGTTGATCCTCGTCATGTGCGGTCTCACCGGCGTGGCCTTCAT
CGGGCTCAGCGTCGGCACACAAGCCGCGCTTCCTGTGCGCGTTCTTGGCTCGGTCATTATCGGTGTCGGGGCCGTATTCT
TCTGGGTAAATTCCAAAGCCAAGAAACGCATGGCCAAAATCGAAGAGCAGCTCCCCGATGGGGTCGAGCTGATGGTGCGC
TCGCTAAGGGTCGGTCATCCGTTTTCCTCGGCAGTGCAGATCGTGGCCAAAGAGGTCGAAGACCCGCTGGCCACCGAATT
TGGAATCATCGCCGATGAATGCGCCTATGGCCGTGACGTGGGCGAAGCGCTGAAGGAAATGGCCGAACGTCTGGACATGC
AGGATCTGCGCTTCCTCGCGGTCGCCGTGACGATCCAACAGCAATCGGGCGGCAACCTCGCCGAAGTGCTTGCAGGGCTT
GCCAAAGTGATCCGCGCCCGTTTTCGACTGTTTCGCCGCGTAAAGGCGATCACGGCCGAGGCGCAGTGGTCGGGCAAATT
CCTCTCTGGCTTTCCGCTCTTCGTGCTTGCTGGCACGCTGGTTTCAGACCCGCATTACTATGACAACGTGATCGACCACC
CGTGGTTCATGCCCGCCTGTTTCATCGTGGGCGGCATGCTGACGGCAAATATCTTCGTGATGCGCAAGCTGACGAACATC
CAGGTCTGA

Upstream 100 bases:

>100_bases
CCGCGACCGGCGTGCGCAGCCATTTCTCGGAACGCTTCCGCCTCTGGGGCTATGACCTGCCGGCGTCGATCTACGAGCCA
ACCGTGATGGAGAGCCGCTG

Downstream 100 bases:

>100_bases
GGAGACAGCCATGGACCCGTTGACCCTTGTTCAAGATCTCCTGATCCAGCACCTAGGTGAGTTTGGCCCGCTGATGGCGG
TTGGATTTCTCGGGCTGCTC

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Pilus Assembly Protein; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein TadB; Type II/IV Secretion System Protein TadC Subfamily; TadB Protein; Type II Secretion System Protein F; Type II Secretion System F Domain; Tad Secretion System Pilus Assembly Protein; Integral Membrane Protein; Secretion System Protein; Type II Secretion System; Type II Secretion System Protein F Domain; Secretion System Protein TadB; Tight Adherence TadB-Related Transmembrane Protein; Transmembrane Pilus Component Protein; Bacterial Type II Secretion System Protein F Domain Protein; Flp Pilus Assembly Protein TadC; TadB-Like Pilus Assembly Protein; Type II Secretion System F Protein; Type II/IV Secretion System Membrane Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Tight Adherence TadB-Like Transmembrane Protein; Components Of Type IV Pilus; TadC Family Type II/IV Secretion System Protein

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MEFGIEPLIYGLIFIGVLVLVEGIYLVAFGKSISLNSRVNRRLEMLEKGGNREQVLEQLRKEMQQHLKSQSIPLYSLLAE
KAQKAAIAFTPIQLILVMCGLTGVAFIGLSVGTQAALPVRVLGSVIIGVGAVFFWVNSKAKKRMAKIEEQLPDGVELMVR
SLRVGHPFSSAVQIVAKEVEDPLATEFGIIADECAYGRDVGEALKEMAERLDMQDLRFLAVAVTIQQQSGGNLAEVLAGL
AKVIRARFRLFRRVKAITAEAQWSGKFLSGFPLFVLAGTLVSDPHYYDNVIDHPWFMPACFIVGGMLTANIFVMRKLTNI
QV

Sequences:

>Translated_322_residues
MEFGIEPLIYGLIFIGVLVLVEGIYLVAFGKSISLNSRVNRRLEMLEKGGNREQVLEQLRKEMQQHLKSQSIPLYSLLAE
KAQKAAIAFTPIQLILVMCGLTGVAFIGLSVGTQAALPVRVLGSVIIGVGAVFFWVNSKAKKRMAKIEEQLPDGVELMVR
SLRVGHPFSSAVQIVAKEVEDPLATEFGIIADECAYGRDVGEALKEMAERLDMQDLRFLAVAVTIQQQSGGNLAEVLAGL
AKVIRARFRLFRRVKAITAEAQWSGKFLSGFPLFVLAGTLVSDPHYYDNVIDHPWFMPACFIVGGMLTANIFVMRKLTNI
QV
>Mature_322_residues
MEFGIEPLIYGLIFIGVLVLVEGIYLVAFGKSISLNSRVNRRLEMLEKGGNREQVLEQLRKEMQQHLKSQSIPLYSLLAE
KAQKAAIAFTPIQLILVMCGLTGVAFIGLSVGTQAALPVRVLGSVIIGVGAVFFWVNSKAKKRMAKIEEQLPDGVELMVR
SLRVGHPFSSAVQIVAKEVEDPLATEFGIIADECAYGRDVGEALKEMAERLDMQDLRFLAVAVTIQQQSGGNLAEVLAGL
AKVIRARFRLFRRVKAITAEAQWSGKFLSGFPLFVLAGTLVSDPHYYDNVIDHPWFMPACFIVGGMLTANIFVMRKLTNI
QV

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35481; Mature: 35481

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA