| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082162
Identifier: 99082162
GI number: 99082162
Start: 2443037
End: 2443366
Strand: Direct
Name: 99082162
Synonym: TM1040_2322
Alternate gene names: NA
Gene position: 2443037-2443366 (Clockwise)
Preceding gene: 99082160
Following gene: 99082163
Centisome position: 76.32
GC content: 58.48
Gene sequence:
>330_bases ATGCATTTTAAAAGCTGGGACGACATTTCCCCGCCGCCAAACGCGGCAGAGCAACAACTCAAAGCCGCCGCCGAGGCTGG CGTATTGTGCGAACTCGGCCCCCGCGATCAAATCCCCGAGGAACCCGCGAACTGGCAAACCCTGACCGCAGCGCAAGAGG CCCGCCACATCCGCGCCGAGGTGCTGCGCCTGATCCTGCTCAATGGGGATGGATGCGACGTCACGAAACGAAGCGTCGCT ATGTTTGGCGCTTACATAAGTGGCTCACTCGATCTTACGAATTGCATCATCCCCGGCAACCTGCTCCTGTATAATTGCCC CTTGGAATAG
Upstream 100 bases:
>100_bases TCAGAAGCGCTGTCTACCGTGAACCCTTCTTTAACCCTTGCCCGTCGGTGTGAGGCTCCGCAGACTGCGGGTATTGAAGC AGGAAACTTAGAGCAGCCAC
Downstream 100 bases:
>100_bases CGCATATTTGCACCCCGATCGAAATGGGCCGGAGACCTGCGGCTGAAAACCTGTGCCTTGCCCGGATTGAAGGCCGGTGG CACCGAGTTTCGTGGGCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MHFKSWDDISPPPNAAEQQLKAAAEAGVLCELGPRDQIPEEPANWQTLTAAQEARHIRAEVLRLILLNGDGCDVTKRSVA MFGAYISGSLDLTNCIIPGNLLLYNCPLE
Sequences:
>Translated_109_residues MHFKSWDDISPPPNAAEQQLKAAAEAGVLCELGPRDQIPEEPANWQTLTAAQEARHIRAEVLRLILLNGDGCDVTKRSVA MFGAYISGSLDLTNCIIPGNLLLYNCPLE >Mature_109_residues MHFKSWDDISPPPNAAEQQLKAAAEAGVLCELGPRDQIPEEPANWQTLTAAQEARHIRAEVLRLILLNGDGCDVTKRSVA MFGAYISGSLDLTNCIIPGNLLLYNCPLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11888; Mature: 11888
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFKSWDDISPPPNAAEQQLKAAAEAGVLCELGPRDQIPEEPANWQTLTAAQEARHIRAE CCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH VLRLILLNGDGCDVTKRSVAMFGAYISGSLDLTNCIIPGNLLLYNCPLE HHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEECCCC >Mature Secondary Structure MHFKSWDDISPPPNAAEQQLKAAAEAGVLCELGPRDQIPEEPANWQTLTAAQEARHIRAE CCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH VLRLILLNGDGCDVTKRSVAMFGAYISGSLDLTNCIIPGNLLLYNCPLE HHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA