| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is wbbJ [C]
Identifier: 99082160
GI number: 99082160
Start: 2440401
End: 2441042
Strand: Direct
Name: wbbJ [C]
Synonym: TM1040_2320
Alternate gene names: 99082160
Gene position: 2440401-2441042 (Clockwise)
Preceding gene: 99082159
Following gene: 99082162
Centisome position: 76.24
GC content: 64.64
Gene sequence:
>642_bases ATGCCGCTGCCAGACCCCAGACTGCGCCATCCGATTGTGCTGCCGGACGGGACTCCGCATGCCGGGACCGTGCTGTTGGC GCGTGTGGTGGAGAACCCGAATTTCATTGTCGGGGACTACACCTATGCATCGGATTTCGAGCCACCACGCGACTGGGGCA GCCACCTCGCACCCTATCTGTTTGCGGGCGCGCGCGAGCAGCTCAAGATCGGTCGGTTTTGTCAAATCGCGCATGGGGTG AAGTTCATCACCGCCTCTGCCAACCACGCGCAAGAGGGCCTCAGCTGCTATCCGTTTCCGGTGTTTGATCCCGCGCAGAT GGCCGGGTTTCAACCCGACACCCGCGACACGGTGATCGGCAATGATGTCTGGATCGGCTACGGCACGCTGATCCTGCCCG GCGCGCGCATCGGCGACGGCGCCATCATCGGCGCGGGTGCCGTGGTGCGCGGCACCGTGCCGCCCTATGCGATCATGACC GGCAATCCTGCCAGCATCGCCCGCCACCGTTTCTCCAAACCTCAGATCGCCCGGCTTCTGGCGCTGAAATGGTGGGACTG GCCCGCTGATCTGATCCTGCGCGCCGAGCCTGCGATCACCTCGGGCGATCTTGACATGCTCGAAGCGCTCGCCCCCGACT GA
Upstream 100 bases:
>100_bases GTTTTTGACGTGACACGGTATCAACCGCTCTCGCGCCTTGGCTATCGTGACTATGCCAAGGTCAGCGATCCGTTCTCCCT CTCGCGCCCGGACGACTGAC
Downstream 100 bases:
>100_bases CGGCGCCGGGCCGAGCCCTGCCAGCACCCAGCTGACAATGCATATAAAAAAGCCGCGGTCCCTTTGGGGACCGCGACCGT TTTGAGACCTCTGTAGGGGC
Product: chloramphenicol O-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MPLPDPRLRHPIVLPDGTPHAGTVLLARVVENPNFIVGDYTYASDFEPPRDWGSHLAPYLFAGAREQLKIGRFCQIAHGV KFITASANHAQEGLSCYPFPVFDPAQMAGFQPDTRDTVIGNDVWIGYGTLILPGARIGDGAIIGAGAVVRGTVPPYAIMT GNPASIARHRFSKPQIARLLALKWWDWPADLILRAEPAITSGDLDMLEALAPD
Sequences:
>Translated_213_residues MPLPDPRLRHPIVLPDGTPHAGTVLLARVVENPNFIVGDYTYASDFEPPRDWGSHLAPYLFAGAREQLKIGRFCQIAHGV KFITASANHAQEGLSCYPFPVFDPAQMAGFQPDTRDTVIGNDVWIGYGTLILPGARIGDGAIIGAGAVVRGTVPPYAIMT GNPASIARHRFSKPQIARLLALKWWDWPADLILRAEPAITSGDLDMLEALAPD >Mature_212_residues PLPDPRLRHPIVLPDGTPHAGTVLLARVVENPNFIVGDYTYASDFEPPRDWGSHLAPYLFAGAREQLKIGRFCQIAHGVK FITASANHAQEGLSCYPFPVFDPAQMAGFQPDTRDTVIGNDVWIGYGTLILPGARIGDGAIIGAGAVVRGTVPPYAIMTG NPASIARHRFSKPQIARLLALKWWDWPADLILRAEPAITSGDLDMLEALAPD
Specific function: Putative O-Acetyltransferase That Transfers An O-Acetyl Group To The O Antigen. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1788345, Length=119, Percent_Identity=35.2941176470588, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR018357 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 23087; Mature: 22956
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPDPRLRHPIVLPDGTPHAGTVLLARVVENPNFIVGDYTYASDFEPPRDWGSHLAPYL CCCCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHH FAGAREQLKIGRFCQIAHGVKFITASANHAQEGLSCYPFPVFDPAQMAGFQPDTRDTVIG HHCCHHHHHHHHHHHHHCCEEEEEECCCHHHCCCCCCCCCCCCHHHHCCCCCCCCCEEEC NDVWIGYGTLILPGARIGDGAIIGAGAVVRGTVPPYAIMTGNPASIARHRFSKPQIARLL CEEEEECCEEEECCCEECCCEEEECCEEEECCCCCEEEEECCHHHHHHHHCCCHHHHHHH ALKWWDWPADLILRAEPAITSGDLDMLEALAPD HHHCCCCCHHEEEECCCCCCCCCHHHHHHHCCC >Mature Secondary Structure PLPDPRLRHPIVLPDGTPHAGTVLLARVVENPNFIVGDYTYASDFEPPRDWGSHLAPYL CCCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHH FAGAREQLKIGRFCQIAHGVKFITASANHAQEGLSCYPFPVFDPAQMAGFQPDTRDTVIG HHCCHHHHHHHHHHHHHCCEEEEEECCCHHHCCCCCCCCCCCCHHHHCCCCCCCCCEEEC NDVWIGYGTLILPGARIGDGAIIGAGAVVRGTVPPYAIMTGNPASIARHRFSKPQIARLL CEEEEECCEEEECCCEECCCEEEECCEEEECCCCCEEEEECCHHHHHHHHCCCHHHHHHH ALKWWDWPADLILRAEPAITSGDLDMLEALAPD HHHCCCCCHHEEEECCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3025178 [H]