Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is wbbJ [C]

Identifier: 99082160

GI number: 99082160

Start: 2440401

End: 2441042

Strand: Direct

Name: wbbJ [C]

Synonym: TM1040_2320

Alternate gene names: 99082160

Gene position: 2440401-2441042 (Clockwise)

Preceding gene: 99082159

Following gene: 99082162

Centisome position: 76.24

GC content: 64.64

Gene sequence:

>642_bases
ATGCCGCTGCCAGACCCCAGACTGCGCCATCCGATTGTGCTGCCGGACGGGACTCCGCATGCCGGGACCGTGCTGTTGGC
GCGTGTGGTGGAGAACCCGAATTTCATTGTCGGGGACTACACCTATGCATCGGATTTCGAGCCACCACGCGACTGGGGCA
GCCACCTCGCACCCTATCTGTTTGCGGGCGCGCGCGAGCAGCTCAAGATCGGTCGGTTTTGTCAAATCGCGCATGGGGTG
AAGTTCATCACCGCCTCTGCCAACCACGCGCAAGAGGGCCTCAGCTGCTATCCGTTTCCGGTGTTTGATCCCGCGCAGAT
GGCCGGGTTTCAACCCGACACCCGCGACACGGTGATCGGCAATGATGTCTGGATCGGCTACGGCACGCTGATCCTGCCCG
GCGCGCGCATCGGCGACGGCGCCATCATCGGCGCGGGTGCCGTGGTGCGCGGCACCGTGCCGCCCTATGCGATCATGACC
GGCAATCCTGCCAGCATCGCCCGCCACCGTTTCTCCAAACCTCAGATCGCCCGGCTTCTGGCGCTGAAATGGTGGGACTG
GCCCGCTGATCTGATCCTGCGCGCCGAGCCTGCGATCACCTCGGGCGATCTTGACATGCTCGAAGCGCTCGCCCCCGACT
GA

Upstream 100 bases:

>100_bases
GTTTTTGACGTGACACGGTATCAACCGCTCTCGCGCCTTGGCTATCGTGACTATGCCAAGGTCAGCGATCCGTTCTCCCT
CTCGCGCCCGGACGACTGAC

Downstream 100 bases:

>100_bases
CGGCGCCGGGCCGAGCCCTGCCAGCACCCAGCTGACAATGCATATAAAAAAGCCGCGGTCCCTTTGGGGACCGCGACCGT
TTTGAGACCTCTGTAGGGGC

Product: chloramphenicol O-acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MPLPDPRLRHPIVLPDGTPHAGTVLLARVVENPNFIVGDYTYASDFEPPRDWGSHLAPYLFAGAREQLKIGRFCQIAHGV
KFITASANHAQEGLSCYPFPVFDPAQMAGFQPDTRDTVIGNDVWIGYGTLILPGARIGDGAIIGAGAVVRGTVPPYAIMT
GNPASIARHRFSKPQIARLLALKWWDWPADLILRAEPAITSGDLDMLEALAPD

Sequences:

>Translated_213_residues
MPLPDPRLRHPIVLPDGTPHAGTVLLARVVENPNFIVGDYTYASDFEPPRDWGSHLAPYLFAGAREQLKIGRFCQIAHGV
KFITASANHAQEGLSCYPFPVFDPAQMAGFQPDTRDTVIGNDVWIGYGTLILPGARIGDGAIIGAGAVVRGTVPPYAIMT
GNPASIARHRFSKPQIARLLALKWWDWPADLILRAEPAITSGDLDMLEALAPD
>Mature_212_residues
PLPDPRLRHPIVLPDGTPHAGTVLLARVVENPNFIVGDYTYASDFEPPRDWGSHLAPYLFAGAREQLKIGRFCQIAHGVK
FITASANHAQEGLSCYPFPVFDPAQMAGFQPDTRDTVIGNDVWIGYGTLILPGARIGDGAIIGAGAVVRGTVPPYAIMTG
NPASIARHRFSKPQIARLLALKWWDWPADLILRAEPAITSGDLDMLEALAPD

Specific function: Putative O-Acetyltransferase That Transfers An O-Acetyl Group To The O Antigen. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

Organism=Escherichia coli, GI1788345, Length=119, Percent_Identity=35.2941176470588, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001451
- InterPro:   IPR018357
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00132 Hexapep [H]

EC number: 2.3.1.- [C]

Molecular weight: Translated: 23087; Mature: 22956

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS00101 HEXAPEP_TRANSFERASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPDPRLRHPIVLPDGTPHAGTVLLARVVENPNFIVGDYTYASDFEPPRDWGSHLAPYL
CCCCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHH
FAGAREQLKIGRFCQIAHGVKFITASANHAQEGLSCYPFPVFDPAQMAGFQPDTRDTVIG
HHCCHHHHHHHHHHHHHCCEEEEEECCCHHHCCCCCCCCCCCCHHHHCCCCCCCCCEEEC
NDVWIGYGTLILPGARIGDGAIIGAGAVVRGTVPPYAIMTGNPASIARHRFSKPQIARLL
CEEEEECCEEEECCCEECCCEEEECCEEEECCCCCEEEEECCHHHHHHHHCCCHHHHHHH
ALKWWDWPADLILRAEPAITSGDLDMLEALAPD
HHHCCCCCHHEEEECCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
PLPDPRLRHPIVLPDGTPHAGTVLLARVVENPNFIVGDYTYASDFEPPRDWGSHLAPYL
CCCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHH
FAGAREQLKIGRFCQIAHGVKFITASANHAQEGLSCYPFPVFDPAQMAGFQPDTRDTVIG
HHCCHHHHHHHHHHHHHCCEEEEEECCCHHHCCCCCCCCCCCCHHHHCCCCCCCCCEEEC
NDVWIGYGTLILPGARIGDGAIIGAGAVVRGTVPPYAIMTGNPASIARHRFSKPQIARLL
CEEEEECCEEEECCCEECCCEEEECCEEEECCCCCEEEEECCHHHHHHHHCCCHHHHHHH
ALKWWDWPADLILRAEPAITSGDLDMLEALAPD
HHHCCCCCHHEEEECCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3025178 [H]