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The map label for this gene is 99082153

Identifier: 99082153

GI number: 99082153

Start: 2434344

End: 2436134

Strand: Direct

Name: 99082153

Synonym: TM1040_2313

Alternate gene names: NA

Gene position: 2434344-2436134 (Clockwise)

Preceding gene: 99082144

Following gene: 99082159

Centisome position: 76.05

GC content: 66.0

Gene sequence:

>1791_bases
ATGAAGAACCTATTTGCCTCGGTGTTGTGGGCAGTGATCCTGTGCTTGAGTGCGCTATCGGGCGCCTCGCAGGCGCAGCA
ATCCAGTGCCGGAGGCGTCTGGATTCAGGTGGCCGCGCGCCCGTCGCTGCAACAGGCACAGGAAGAGGCGCGCAATTTCG
CGGCCCGCCTGCCCGATGTGTCGGGCTATGCCTTGGGCGGCGGCTGGTATGGCATCGTGATTGGCCCCTATGCTCGCCCC
GATGCCGAGCAGGTGTTGCGGGTCTATCGCGCTGAGGGCCAGATCCCGCGCGACAGCTTCATCACCTTCTCAAGCAATCT
GCGCAGCCGGTTTTACCCCGTTGGAGCGGACGCCGACACAGGCACCACCGCCCCTGCGCCGCTGACCACCTCCGATGCCG
AGACCGCGCCGCCAGAGCCAGCGGAGGACGCCACGTCTGAGGTGACGCCCGAGGTGGTCGTGGTGGATGAGACCCCCGCC
GAAGCGCGCCAGAGCGAACGCGCCCTCACACGCGAAGAACGCATGGATCTGCAAATCGCGCTGAAGGCGGCAGGGTTCTA
CACCTCCGGCATCGACGGTGCCTTTGGCCGCGGCACGCGCGCCTCCATGTCTGACTGGCAGGTGGCACGCGGGTATGAGC
CGACCGGCGTTCTGACCACTGCCCAGCGCCAGGCCCTGATGGACGAGTATAACGCGCCGCTGATTTCCACCGGCATGGCG
TCTTATACTGACGAGCGCGCGGGCATCCGCATGGATCTGCCCTTGGGCGAAGTGGCCTTCAGCCGTTATGAGCCGCCTTT
TGCGCATTTTGACACGGCCGGAGATCTCGGCGCTCGGGTTCTGCTGATTTCGCAGCCCGGCGACCGCCGCACGCTCTATG
GTCTCTATGACATCATGCAGACGCTGGAGATTGTGCCGCTCGAGGGACCACGCGAACGCAGCGGCGACCGCTTCACGCTC
GAAGGCCGCAACAGCGACATCGTCTCTTATACCGAGGCCCGCCTCGACAATGGCGAGATCAAAGGCTTCACGCTGGTCTG
GCCCGCAGGGGACGAGGCGCGCCGCGCCCGCGTTCTTTCGGCCATGCAAGAGAGCTTTACCCGTCTGGAGAACGTGCTCG
ATCCGGCGGCCGGCATGGATGATGCGCAGTCCATCGACCTTGTGTCGGGGCTGGAGATCCGCAAACCGCGCCTGTCGCGC
TCGGGTTTCTTTGTGTCGGGCGACGGTGTGGTTGTGACCACCGCCGATGTGGTGAACGGCTGCGGCAGCGTCACAGTAGA
CCGCGATGTGAAGGCCGAGGTGCTGTTGCGCGATAGCGAGGCAGGCATTGCAGTGCTGAAACCTTCCGAGGCACTGGCCC
CGATGGCGACTGCGCCGCTTGCGGCCAACACGCCGCGCCTGCGCAGCGCGCTTGCCGTGTCGGGCTACTCCTACGGCGGA
ATCCTTGGCGCACCAAGCCTCACATGGGGCGCGCTCAGCGATCTCAAGGGGCTGCAAGGCGAAAGCCATCTGGCGCGTCT
GGACCTGACCGCCCAGCCCGGTGATGCGGGCGGGCCGCTTCTTGGCAAGGATGGCACCGTGCATGGCATGCTGCTGCCGG
AGGCCACCAATGGCCCCACCCTGCCCGAGGGCGTGCGCTTTGCCCTAAAGGGCGAGGTCATCCGCATGGCGCTCGAACAG
GCTGGCGTGGGCTTGCCCGCGACCGAGGCCGCCGCCACCGGCGAGCTGCCCATCTCGATCCTGCAAAAAGAGGCCACTGG
CCTCACCACGCTGGTCAGCTGCTGGGAGTAA

Upstream 100 bases:

>100_bases
ATTTCCGGGCTCATGTGCGAAATCTCGCCGTTTCCTTTTGGGGCGCAAAATGGTTACCTGCGCGGCGACAAAATTCATTT
CGTTGTACAGAGGATGAGCA

Downstream 100 bases:

>100_bases
ACCCTTCCGAGCCCATGACTGCCTCAGACAAAAGGCTCCCGAAGTGATCTTCGGGAGCCCTTTTTATTGGAACGATGGGG
CGTCCGCGCGACAGCGTCTG

Product: peptidoglycan binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 596

Protein sequence:

>596_residues
MKNLFASVLWAVILCLSALSGASQAQQSSAGGVWIQVAARPSLQQAQEEARNFAARLPDVSGYALGGGWYGIVIGPYARP
DAEQVLRVYRAEGQIPRDSFITFSSNLRSRFYPVGADADTGTTAPAPLTTSDAETAPPEPAEDATSEVTPEVVVVDETPA
EARQSERALTREERMDLQIALKAAGFYTSGIDGAFGRGTRASMSDWQVARGYEPTGVLTTAQRQALMDEYNAPLISTGMA
SYTDERAGIRMDLPLGEVAFSRYEPPFAHFDTAGDLGARVLLISQPGDRRTLYGLYDIMQTLEIVPLEGPRERSGDRFTL
EGRNSDIVSYTEARLDNGEIKGFTLVWPAGDEARRARVLSAMQESFTRLENVLDPAAGMDDAQSIDLVSGLEIRKPRLSR
SGFFVSGDGVVVTTADVVNGCGSVTVDRDVKAEVLLRDSEAGIAVLKPSEALAPMATAPLAANTPRLRSALAVSGYSYGG
ILGAPSLTWGALSDLKGLQGESHLARLDLTAQPGDAGGPLLGKDGTVHGMLLPEATNGPTLPEGVRFALKGEVIRMALEQ
AGVGLPATEAAATGELPISILQKEATGLTTLVSCWE

Sequences:

>Translated_596_residues
MKNLFASVLWAVILCLSALSGASQAQQSSAGGVWIQVAARPSLQQAQEEARNFAARLPDVSGYALGGGWYGIVIGPYARP
DAEQVLRVYRAEGQIPRDSFITFSSNLRSRFYPVGADADTGTTAPAPLTTSDAETAPPEPAEDATSEVTPEVVVVDETPA
EARQSERALTREERMDLQIALKAAGFYTSGIDGAFGRGTRASMSDWQVARGYEPTGVLTTAQRQALMDEYNAPLISTGMA
SYTDERAGIRMDLPLGEVAFSRYEPPFAHFDTAGDLGARVLLISQPGDRRTLYGLYDIMQTLEIVPLEGPRERSGDRFTL
EGRNSDIVSYTEARLDNGEIKGFTLVWPAGDEARRARVLSAMQESFTRLENVLDPAAGMDDAQSIDLVSGLEIRKPRLSR
SGFFVSGDGVVVTTADVVNGCGSVTVDRDVKAEVLLRDSEAGIAVLKPSEALAPMATAPLAANTPRLRSALAVSGYSYGG
ILGAPSLTWGALSDLKGLQGESHLARLDLTAQPGDAGGPLLGKDGTVHGMLLPEATNGPTLPEGVRFALKGEVIRMALEQ
AGVGLPATEAAATGELPISILQKEATGLTTLVSCWE
>Mature_596_residues
MKNLFASVLWAVILCLSALSGASQAQQSSAGGVWIQVAARPSLQQAQEEARNFAARLPDVSGYALGGGWYGIVIGPYARP
DAEQVLRVYRAEGQIPRDSFITFSSNLRSRFYPVGADADTGTTAPAPLTTSDAETAPPEPAEDATSEVTPEVVVVDETPA
EARQSERALTREERMDLQIALKAAGFYTSGIDGAFGRGTRASMSDWQVARGYEPTGVLTTAQRQALMDEYNAPLISTGMA
SYTDERAGIRMDLPLGEVAFSRYEPPFAHFDTAGDLGARVLLISQPGDRRTLYGLYDIMQTLEIVPLEGPRERSGDRFTL
EGRNSDIVSYTEARLDNGEIKGFTLVWPAGDEARRARVLSAMQESFTRLENVLDPAAGMDDAQSIDLVSGLEIRKPRLSR
SGFFVSGDGVVVTTADVVNGCGSVTVDRDVKAEVLLRDSEAGIAVLKPSEALAPMATAPLAANTPRLRSALAVSGYSYGG
ILGAPSLTWGALSDLKGLQGESHLARLDLTAQPGDAGGPLLGKDGTVHGMLLPEATNGPTLPEGVRFALKGEVIRMALEQ
AGVGLPATEAAATGELPISILQKEATGLTTLVSCWE

Specific function: Unknown

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S1B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009003
- InterPro:   IPR001254
- InterPro:   IPR001940 [H]

Pfam domain/function: PF00089 Trypsin [H]

EC number: NA

Molecular weight: Translated: 63223; Mature: 63223

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLFASVLWAVILCLSALSGASQAQQSSAGGVWIQVAARPSLQQAQEEARNFAARLPDV
CHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCC
SGYALGGGWYGIVIGPYARPDAEQVLRVYRAEGQIPRDSFITFSSNLRSRFYPVGADADT
CCEEECCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCHHHEEECCCCCCC
GTTAPAPLTTSDAETAPPEPAEDATSEVTPEVVVVDETPAEARQSERALTREERMDLQIA
CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEE
LKAAGFYTSGIDGAFGRGTRASMSDWQVARGYEPTGVLTTAQRQALMDEYNAPLISTGMA
EEECCCEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEHHHHHHHHHHHCCCEEECCCH
SYTDERAGIRMDLPLGEVAFSRYEPPFAHFDTAGDLGARVLLISQPGDRRTLYGLYDIMQ
HCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHH
TLEIVPLEGPRERSGDRFTLEGRNSDIVSYTEARLDNGEIKGFTLVWPAGDEARRARVLS
HHEEECCCCCCCCCCCEEEECCCCCCEEEHHHHHCCCCCCCEEEEEECCCCHHHHHHHHH
AMQESFTRLENVLDPAAGMDDAQSIDLVSGLEIRKPRLSRSGFFVSGDGVVVTTADVVNG
HHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEECCCEEEEEHHHHCC
CGSVTVDRDVKAEVLLRDSEAGIAVLKPSEALAPMATAPLAANTPRLRSALAVSGYSYGG
CCCEEECCCCCEEEEEEECCCCEEEECCCHHHCCHHCCCCCCCCHHHHHHHEECCCCCCC
ILGAPSLTWGALSDLKGLQGESHLARLDLTAQPGDAGGPLLGKDGTVHGMLLPEATNGPT
EECCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCC
LPEGVRFALKGEVIRMALEQAGVGLPATEAAATGELPISILQKEATGLTTLVSCWE
CCHHHEEHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure
MKNLFASVLWAVILCLSALSGASQAQQSSAGGVWIQVAARPSLQQAQEEARNFAARLPDV
CHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCC
SGYALGGGWYGIVIGPYARPDAEQVLRVYRAEGQIPRDSFITFSSNLRSRFYPVGADADT
CCEEECCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCHHHEEECCCCCCC
GTTAPAPLTTSDAETAPPEPAEDATSEVTPEVVVVDETPAEARQSERALTREERMDLQIA
CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEE
LKAAGFYTSGIDGAFGRGTRASMSDWQVARGYEPTGVLTTAQRQALMDEYNAPLISTGMA
EEECCCEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEHHHHHHHHHHHCCCEEECCCH
SYTDERAGIRMDLPLGEVAFSRYEPPFAHFDTAGDLGARVLLISQPGDRRTLYGLYDIMQ
HCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHH
TLEIVPLEGPRERSGDRFTLEGRNSDIVSYTEARLDNGEIKGFTLVWPAGDEARRARVLS
HHEEECCCCCCCCCCCEEEECCCCCCEEEHHHHHCCCCCCCEEEEEECCCCHHHHHHHHH
AMQESFTRLENVLDPAAGMDDAQSIDLVSGLEIRKPRLSRSGFFVSGDGVVVTTADVVNG
HHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEECCCEEEEEHHHHCC
CGSVTVDRDVKAEVLLRDSEAGIAVLKPSEALAPMATAPLAANTPRLRSALAVSGYSYGG
CCCEEECCCCCEEEEEEECCCCEEEECCCHHHCCHHCCCCCCCCHHHHHHHEECCCCCCC
ILGAPSLTWGALSDLKGLQGESHLARLDLTAQPGDAGGPLLGKDGTVHGMLLPEATNGPT
EECCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCC
LPEGVRFALKGEVIRMALEQAGVGLPATEAAATGELPISILQKEATGLTTLVSCWE
CCHHHEEHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]