Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082057

Identifier: 99082057

GI number: 99082057

Start: 2329522

End: 2329884

Strand: Direct

Name: 99082057

Synonym: TM1040_2217

Alternate gene names: NA

Gene position: 2329522-2329884 (Clockwise)

Preceding gene: 99082056

Following gene: 99082058

Centisome position: 72.78

GC content: 61.43

Gene sequence:

>363_bases
ATGATCGTTGCAGGCTTTGGCTTTTCAAACCGCGCCTCTGAGGCCAGCTTTGCCGAGGCTTTTGCCGCATTGGACAGGCG
CCCGGATTGGGTGGCCGTTTTGCGCAACAAAGCCAAGAGCCCGGTGTTTCGCGCCTTTGCCCTTGCAGAGGGGCTGCGTG
TGGAACCCCTCGAGGAGTATCAGATTTCCGGGGCCCAGACCCCGACCCTTTCGCCGCGCATCCACGCGCGGTTTGACACC
GGATCTGTCGCCGAAGCCTGCGCCCTTGTGGCAGCGGGCAAACACGCGCGCCTAATCCAAAGACGATTTGTGACCACGGA
TGGGCTTGCCACCGTGGCGCTTGCGGAGACAATAGCAAGATGA

Upstream 100 bases:

>100_bases
GAGGCCATTTGCTGAAGGTGGAGATCGCCGAAGCGGGCCCCTTGGGCACACTGCGCGGATGGGAGCGCGCGCGCCCCGTG
ATCCAATGGAGCGTGACCCG

Downstream 100 bases:

>100_bases
CCGTTCATTTTATCGGTGCCGGACCCGGCGCCGCCGACCTCATTACCCTGCGCGGGCGTGATCTGATCGCGGCCTGCCCT
GTGTGTCTTTATGCAGGCTC

Product: putative precorrin methylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MIVAGFGFSNRASEASFAEAFAALDRRPDWVAVLRNKAKSPVFRAFALAEGLRVEPLEEYQISGAQTPTLSPRIHARFDT
GSVAEACALVAAGKHARLIQRRFVTTDGLATVALAETIAR

Sequences:

>Translated_120_residues
MIVAGFGFSNRASEASFAEAFAALDRRPDWVAVLRNKAKSPVFRAFALAEGLRVEPLEEYQISGAQTPTLSPRIHARFDT
GSVAEACALVAAGKHARLIQRRFVTTDGLATVALAETIAR
>Mature_120_residues
MIVAGFGFSNRASEASFAEAFAALDRRPDWVAVLRNKAKSPVFRAFALAEGLRVEPLEEYQISGAQTPTLSPRIHARFDT
GSVAEACALVAAGKHARLIQRRFVTTDGLATVALAETIAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12916; Mature: 12916

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVAGFGFSNRASEASFAEAFAALDRRPDWVAVLRNKAKSPVFRAFALAEGLRVEPLEEY
CEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHH
QISGAQTPTLSPRIHARFDTGSVAEACALVAAGKHARLIQRRFVTTDGLATVALAETIAR
HCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MIVAGFGFSNRASEASFAEAFAALDRRPDWVAVLRNKAKSPVFRAFALAEGLRVEPLEEY
CEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHH
QISGAQTPTLSPRIHARFDTGSVAEACALVAAGKHARLIQRRFVTTDGLATVALAETIAR
HCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA