Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is yqiK [H]

Identifier: 99082035

GI number: 99082035

Start: 2304591

End: 2306279

Strand: Reverse

Name: yqiK [H]

Synonym: TM1040_2195

Alternate gene names: 99082035

Gene position: 2306279-2304591 (Counterclockwise)

Preceding gene: 99082036

Following gene: 99082032

Centisome position: 72.05

GC content: 62.82

Gene sequence:

>1689_bases
ATGGATGGATCTTTCCTATTGGTGCCTGTCATCAGTATCTTGGCGCTGGTTGCCCTCATCGGGCTTGTCCTTGGACGGCT
CTATCGCCGGGCCACCCGTGAAGTCAGCCTGGTAAAGACCGGCTCTGGCGGCAAAAAGGTCATTATGGACGGCGGTACGG
TTGTGGTTCCGCTGCTGCATGAAATCAGCCCGGTCAACATGAAGACCCTGCGTCTGGAGGTGCAGCGCTCGGGTGAGGCG
GCACTCATTACCCAGGACCGCATGCGGGTCGATGTGGGTGTGGAGTTCTACGTCTCGGTGATGGCCACCGAAGAAGGGAT
TTCGCGCGCGGCGCAGACGCTTGGGGACCGCACATTCGATGTCGAGCAGCTGCGCGAGATGATCGAAGGCAAGCTCATCG
ATGGTCTGCGCGCCGTGGCGGCCCAGATGACGATGGACGGGCTCCATGAAAACCGCGCCGATTTTGTGCAGGAGGTGCAG
AATGCCGTCTCCGAGGATCTGCTGAAAAACGGTCTGTCGCTTGAATCCGTCTCGCTGACCGCGCTCGACCAGACACCCTT
TGAGGCGCTGGATGAAAACAACGCCTTCAACGCGGTCGGTATGCGCAAGCTGGCAGAGGTGATTGCGACCTCCAAAAAAG
AGCGCGCGCAGATCGACGCAGAGGCAGAAGTCGCCGTGCGCCGCGCCGCAATGGAAGCCGAGCGTCACAAGCTGTTGATC
GAGCAGGATGAACAGCAGGCCCGCATCGAGCAGATGCAAAAGGTCGAGACCATGCGAGTCGCCCAAGAGGCGGAGATCGC
AGCCCGGACCGAGGACTCGGTGCGCGAAACAGAACGCGCGCGGATCGCCCGCGAAGAAGCCATCCGCGCCGCCGATATTG
AGCGCGAGCGCAAGATCCGCGAGGCCGAGATCACCAAGGAGCGCGAACTGGAGGTGGCCGAGCAGGAACGCCAGATCATC
ATTGCGCAGAAATCCGAGGAAGAAAGCCGCGCCCGCGCCTCTGCCGACCTCGCCCGTGCCGAGGCCATCAAGGCGACCGA
GGCCGTCGCGACCGCGCGTGAGGTGGCCGAGGCCGAGCGTCAAAAGCAGATTGTCCTCATTGAGGCTGCGCGAGAGGCAG
AGCGTCAAGCCACTGGCATCCGTCTGGCCGCGCAGGCCGAAAAAGAAGCCGCCGCCGACCGCGCCGAGGCCCGTCGCGAG
GAAGCACAGGCCGAGGCAGACGCGCTCAATATTCGCGCGGAGGCCAAGAAAAACGACATGCTGGCCGAAGCGGAAGGTAA
ACGCGCCCTTGTGGAGGCGGACAATGCGCTCTCGCCGGAACTGGTGCGCATGAAGGTTGACCTCGCTCGCATCGAGGCGA
TGCCCTCGATCATTGCAGAGATGGTGAAACCGGCCGAGAAAATCGACTCGATCAAGATCCATCAGGTCGGTGGCGTGGGC
GGCGGCGCGGCCTACAGCAGCGCGGGCGCCTCTGGCGACAAACCCGTGGTCAATCAGGCGCTCGATTCCATCATGGGCAT
GGCGGTGCAGATGCCGGCGCTCAAAACACTGGGGCGTGAACTGGGGATCTCAATGGAGGACGGCGTGTCCGGCGTGGTGA
ACGGCATGCTGGAGGGCAATGACATCGCCCCCGAAGTCGCCGCCGACCCGGAGGCAACGGATCAGGCGAAGACCTCAGAG
GTTCACTAA

Upstream 100 bases:

>100_bases
GATCGGCGGAGCAAACGATATGTTCTGGTGCCGCTCTCTGAATAAGCGGCGCTCAGACTTCAAATCGATACGAACTATTT
GAACAAAAAGGAGAATTGGG

Downstream 100 bases:

>100_bases
GCGCTGATGCGCTGAGACATCGGAAAGGGCTGGCCGCGCGCTGGCCCTTTTTGTTTTGGGCGCGATGGAATGTGAATACG
GGTTTGGCAGCTTTGAGCCC

Product: band 7 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 562; Mature: 562

Protein sequence:

>562_residues
MDGSFLLVPVISILALVALIGLVLGRLYRRATREVSLVKTGSGGKKVIMDGGTVVVPLLHEISPVNMKTLRLEVQRSGEA
ALITQDRMRVDVGVEFYVSVMATEEGISRAAQTLGDRTFDVEQLREMIEGKLIDGLRAVAAQMTMDGLHENRADFVQEVQ
NAVSEDLLKNGLSLESVSLTALDQTPFEALDENNAFNAVGMRKLAEVIATSKKERAQIDAEAEVAVRRAAMEAERHKLLI
EQDEQQARIEQMQKVETMRVAQEAEIAARTEDSVRETERARIAREEAIRAADIERERKIREAEITKERELEVAEQERQII
IAQKSEEESRARASADLARAEAIKATEAVATAREVAEAERQKQIVLIEAAREAERQATGIRLAAQAEKEAAADRAEARRE
EAQAEADALNIRAEAKKNDMLAEAEGKRALVEADNALSPELVRMKVDLARIEAMPSIIAEMVKPAEKIDSIKIHQVGGVG
GGAAYSSAGASGDKPVVNQALDSIMGMAVQMPALKTLGRELGISMEDGVSGVVNGMLEGNDIAPEVAADPEATDQAKTSE
VH

Sequences:

>Translated_562_residues
MDGSFLLVPVISILALVALIGLVLGRLYRRATREVSLVKTGSGGKKVIMDGGTVVVPLLHEISPVNMKTLRLEVQRSGEA
ALITQDRMRVDVGVEFYVSVMATEEGISRAAQTLGDRTFDVEQLREMIEGKLIDGLRAVAAQMTMDGLHENRADFVQEVQ
NAVSEDLLKNGLSLESVSLTALDQTPFEALDENNAFNAVGMRKLAEVIATSKKERAQIDAEAEVAVRRAAMEAERHKLLI
EQDEQQARIEQMQKVETMRVAQEAEIAARTEDSVRETERARIAREEAIRAADIERERKIREAEITKERELEVAEQERQII
IAQKSEEESRARASADLARAEAIKATEAVATAREVAEAERQKQIVLIEAAREAERQATGIRLAAQAEKEAAADRAEARRE
EAQAEADALNIRAEAKKNDMLAEAEGKRALVEADNALSPELVRMKVDLARIEAMPSIIAEMVKPAEKIDSIKIHQVGGVG
GGAAYSSAGASGDKPVVNQALDSIMGMAVQMPALKTLGRELGISMEDGVSGVVNGMLEGNDIAPEVAADPEATDQAKTSE
VH
>Mature_562_residues
MDGSFLLVPVISILALVALIGLVLGRLYRRATREVSLVKTGSGGKKVIMDGGTVVVPLLHEISPVNMKTLRLEVQRSGEA
ALITQDRMRVDVGVEFYVSVMATEEGISRAAQTLGDRTFDVEQLREMIEGKLIDGLRAVAAQMTMDGLHENRADFVQEVQ
NAVSEDLLKNGLSLESVSLTALDQTPFEALDENNAFNAVGMRKLAEVIATSKKERAQIDAEAEVAVRRAAMEAERHKLLI
EQDEQQARIEQMQKVETMRVAQEAEIAARTEDSVRETERARIAREEAIRAADIERERKIREAEITKERELEVAEQERQII
IAQKSEEESRARASADLARAEAIKATEAVATAREVAEAERQKQIVLIEAAREAERQATGIRLAAQAEKEAAADRAEARRE
EAQAEADALNIRAEAKKNDMLAEAEGKRALVEADNALSPELVRMKVDLARIEAMPSIIAEMVKPAEKIDSIKIHQVGGVG
GGAAYSSAGASGDKPVVNQALDSIMGMAVQMPALKTLGRELGISMEDGVSGVVNGMLEGNDIAPEVAADPEATDQAKTSE
VH

Specific function: Unknown

COG id: COG2268

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yuaG and Synechocystis PCC 6803 sll1021 [H]

Homologues:

Organism=Escherichia coli, GI1789430, Length=534, Percent_Identity=44.9438202247191, Blast_Score=395, Evalue=1e-111,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 61074; Mature: 61074

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGSFLLVPVISILALVALIGLVLGRLYRRATREVSLVKTGSGGKKVIMDGGTVVVPLLH
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCEEEEEHHH
EISPVNMKTLRLEVQRSGEAALITQDRMRVDVGVEFYVSVMATEEGISRAAQTLGDRTFD
CCCCCCEEEEEEEEECCCCEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCC
VEQLREMIEGKLIDGLRAVAAQMTMDGLHENRADFVQEVQNAVSEDLLKNGLSLESVSLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
ALDQTPFEALDENNAFNAVGMRKLAEVIATSKKERAQIDAEAEVAVRRAAMEAERHKLLI
EECCCCHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
EQDEQQARIEQMQKVETMRVAQEAEIAARTEDSVRETERARIAREEAIRAADIERERKIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAEITKERELEVAEQERQIIIAQKSEEESRARASADLARAEAIKATEAVATAREVAEAER
HHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKQIVLIEAAREAERQATGIRLAAQAEKEAAADRAEARREEAQAEADALNIRAEAKKNDM
CCCEEEEEHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC
LAEAEGKRALVEADNALSPELVRMKVDLARIEAMPSIIAEMVKPAEKIDSIKIHQVGGVG
CHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCC
GGAAYSSAGASGDKPVVNQALDSIMGMAVQMPALKTLGRELGISMEDGVSGVVNGMLEGN
CCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHCCCCC
DIAPEVAADPEATDQAKTSEVH
CCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDGSFLLVPVISILALVALIGLVLGRLYRRATREVSLVKTGSGGKKVIMDGGTVVVPLLH
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCEEEEEHHH
EISPVNMKTLRLEVQRSGEAALITQDRMRVDVGVEFYVSVMATEEGISRAAQTLGDRTFD
CCCCCCEEEEEEEEECCCCEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCC
VEQLREMIEGKLIDGLRAVAAQMTMDGLHENRADFVQEVQNAVSEDLLKNGLSLESVSLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
ALDQTPFEALDENNAFNAVGMRKLAEVIATSKKERAQIDAEAEVAVRRAAMEAERHKLLI
EECCCCHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
EQDEQQARIEQMQKVETMRVAQEAEIAARTEDSVRETERARIAREEAIRAADIERERKIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAEITKERELEVAEQERQIIIAQKSEEESRARASADLARAEAIKATEAVATAREVAEAER
HHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKQIVLIEAAREAERQATGIRLAAQAEKEAAADRAEARREEAQAEADALNIRAEAKKNDM
CCCEEEEEHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC
LAEAEGKRALVEADNALSPELVRMKVDLARIEAMPSIIAEMVKPAEKIDSIKIHQVGGVG
CHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCC
GGAAYSSAGASGDKPVVNQALDSIMGMAVQMPALKTLGRELGISMEDGVSGVVNGMLEGN
CCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHCCCCC
DIAPEVAADPEATDQAKTSEVH
CCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]