| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082013
Identifier: 99082013
GI number: 99082013
Start: 2286144
End: 2286428
Strand: Reverse
Name: 99082013
Synonym: TM1040_2173
Alternate gene names: NA
Gene position: 2286428-2286144 (Counterclockwise)
Preceding gene: 99082015
Following gene: 99082012
Centisome position: 71.43
GC content: 61.4
Gene sequence:
>285_bases ATGCCATTTTCCGCCGATCGCGCCGAAGTTCTGGGCCTAAAGGCGCTCACTTGGCTGGCCGGGAACGAAGAGCTCTTGCC AATCTTTCTGGGGTCCAGCGGAGCCTCGCTCAGTGATTTGCGCGACCGCGTGAACGACCCGGAGTTTCTGGGCGCAGTGC TGGACTTTCTGCTGATGGACGATTCCTGGGTGATGGCGTTTTGTGACCATGAGGGCGTGCCATATCCGTCGCTTGTGGAA GCCCGCGCGACGCTGCCCGGGGGTGAACAGGTGCACTGGACGTGA
Upstream 100 bases:
>100_bases TTCCCGGCTTTTGCTTGTGTTTGAGTGTTGTTGAGACTGGTTAACAAACCCTTTCGGGGGTAGTGCAAATTGACTTAAAA ATGTCGACAAGGAGGCCGTT
Downstream 100 bases:
>100_bases TACACGCTGCCAAACGGATTTTCCCAAGGACTTCTCATGACTCTCTCTGCGCTTCTTTTCGACAAGGACGGCACGCTTTT TGACTTTGCCCAGACCTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MPFSADRAEVLGLKALTWLAGNEELLPIFLGSSGASLSDLRDRVNDPEFLGAVLDFLLMDDSWVMAFCDHEGVPYPSLVE ARATLPGGEQVHWT
Sequences:
>Translated_94_residues MPFSADRAEVLGLKALTWLAGNEELLPIFLGSSGASLSDLRDRVNDPEFLGAVLDFLLMDDSWVMAFCDHEGVPYPSLVE ARATLPGGEQVHWT >Mature_93_residues PFSADRAEVLGLKALTWLAGNEELLPIFLGSSGASLSDLRDRVNDPEFLGAVLDFLLMDDSWVMAFCDHEGVPYPSLVEA RATLPGGEQVHWT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10277; Mature: 10146
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFSADRAEVLGLKALTWLAGNEELLPIFLGSSGASLSDLRDRVNDPEFLGAVLDFLLMD CCCCCCCHHHHHHHHHEEECCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHCC DSWVMAFCDHEGVPYPSLVEARATLPGGEQVHWT CCEEEEEECCCCCCCCHHHHHHCCCCCCCEECCC >Mature Secondary Structure PFSADRAEVLGLKALTWLAGNEELLPIFLGSSGASLSDLRDRVNDPEFLGAVLDFLLMD CCCCCCHHHHHHHHHEEECCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHCC DSWVMAFCDHEGVPYPSLVEARATLPGGEQVHWT CCEEEEEECCCCCCCCHHHHHHCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA