Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082013

Identifier: 99082013

GI number: 99082013

Start: 2286144

End: 2286428

Strand: Reverse

Name: 99082013

Synonym: TM1040_2173

Alternate gene names: NA

Gene position: 2286428-2286144 (Counterclockwise)

Preceding gene: 99082015

Following gene: 99082012

Centisome position: 71.43

GC content: 61.4

Gene sequence:

>285_bases
ATGCCATTTTCCGCCGATCGCGCCGAAGTTCTGGGCCTAAAGGCGCTCACTTGGCTGGCCGGGAACGAAGAGCTCTTGCC
AATCTTTCTGGGGTCCAGCGGAGCCTCGCTCAGTGATTTGCGCGACCGCGTGAACGACCCGGAGTTTCTGGGCGCAGTGC
TGGACTTTCTGCTGATGGACGATTCCTGGGTGATGGCGTTTTGTGACCATGAGGGCGTGCCATATCCGTCGCTTGTGGAA
GCCCGCGCGACGCTGCCCGGGGGTGAACAGGTGCACTGGACGTGA

Upstream 100 bases:

>100_bases
TTCCCGGCTTTTGCTTGTGTTTGAGTGTTGTTGAGACTGGTTAACAAACCCTTTCGGGGGTAGTGCAAATTGACTTAAAA
ATGTCGACAAGGAGGCCGTT

Downstream 100 bases:

>100_bases
TACACGCTGCCAAACGGATTTTCCCAAGGACTTCTCATGACTCTCTCTGCGCTTCTTTTCGACAAGGACGGCACGCTTTT
TGACTTTGCCCAGACCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MPFSADRAEVLGLKALTWLAGNEELLPIFLGSSGASLSDLRDRVNDPEFLGAVLDFLLMDDSWVMAFCDHEGVPYPSLVE
ARATLPGGEQVHWT

Sequences:

>Translated_94_residues
MPFSADRAEVLGLKALTWLAGNEELLPIFLGSSGASLSDLRDRVNDPEFLGAVLDFLLMDDSWVMAFCDHEGVPYPSLVE
ARATLPGGEQVHWT
>Mature_93_residues
PFSADRAEVLGLKALTWLAGNEELLPIFLGSSGASLSDLRDRVNDPEFLGAVLDFLLMDDSWVMAFCDHEGVPYPSLVEA
RATLPGGEQVHWT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10277; Mature: 10146

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFSADRAEVLGLKALTWLAGNEELLPIFLGSSGASLSDLRDRVNDPEFLGAVLDFLLMD
CCCCCCCHHHHHHHHHEEECCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHCC
DSWVMAFCDHEGVPYPSLVEARATLPGGEQVHWT
CCEEEEEECCCCCCCCHHHHHHCCCCCCCEECCC
>Mature Secondary Structure 
PFSADRAEVLGLKALTWLAGNEELLPIFLGSSGASLSDLRDRVNDPEFLGAVLDFLLMD
CCCCCCHHHHHHHHHEEECCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHCC
DSWVMAFCDHEGVPYPSLVEARATLPGGEQVHWT
CCEEEEEECCCCCCCCHHHHHHCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA