| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082001
Identifier: 99082001
GI number: 99082001
Start: 2271476
End: 2271964
Strand: Reverse
Name: 99082001
Synonym: TM1040_2161
Alternate gene names: NA
Gene position: 2271964-2271476 (Counterclockwise)
Preceding gene: 99082002
Following gene: 99081998
Centisome position: 70.98
GC content: 61.55
Gene sequence:
>489_bases ATGGAGCTGAAGGATCTGAAATCCGGGCGGTTGCATGCAACGGAGCCTGTGCAGATGACGGCGGCGGATCGCGAGGCCTT GTTCGCACCGGAGGTTGTGGCGTTCCTTCCACCGGGGTTTCAAAACCTGGGGTCCGATGCAGCGCGGCGTCACCTCATTG ACGCGCTGCAACAAGAGGCCGAGGTCGTCGCGCTGAGCGCTCAAGATCAAGAGATTGTCGGTCTCGTAATCCTGTCTTTT GCCCATGACGCCGCGGGCCAGCGCAATCTGGGCTATCTCTTTACGCGCCGGGCATGGGGGCAGGGCTATGCCAGCGAGAT GCTGCGCGCGCTGCAAGATCAGCTGCGAGGAACGCACGTGGTGTTGTCCGGTGGCGTGATGGCCGAGAACGCCGCCTCGG CCCGTGTCCTCGAGAAATGCGGATTTGAACCCGGCGAGAAAACTGCCTCTGGTGAGATGACCTATGTTTGGGATGCCGCA CAGGGCTAA
Upstream 100 bases:
>100_bases GGGGTTTTGACGTGGTATCGTGATGGCGGGCGGTTGTCGCTTGTAGAGGTGGAGACGCTCTATTGGGATATGGTGCGCAA ATCTGTCGGGGTGTAGCGCG
Downstream 100 bases:
>100_bases GCTTGCAAGGCGTCACAAAGTGGAGCGCTTCCGCGCGGCTTTTGTTCAGCAGGCCTTGAGGCGATGGAAGATCGCGGACG TCCCGTTTGGTGCGGGTGTT
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MELKDLKSGRLHATEPVQMTAADREALFAPEVVAFLPPGFQNLGSDAARRHLIDALQQEAEVVALSAQDQEIVGLVILSF AHDAAGQRNLGYLFTRRAWGQGYASEMLRALQDQLRGTHVVLSGGVMAENAASARVLEKCGFEPGEKTASGEMTYVWDAA QG
Sequences:
>Translated_162_residues MELKDLKSGRLHATEPVQMTAADREALFAPEVVAFLPPGFQNLGSDAARRHLIDALQQEAEVVALSAQDQEIVGLVILSF AHDAAGQRNLGYLFTRRAWGQGYASEMLRALQDQLRGTHVVLSGGVMAENAASARVLEKCGFEPGEKTASGEMTYVWDAA QG >Mature_162_residues MELKDLKSGRLHATEPVQMTAADREALFAPEVVAFLPPGFQNLGSDAARRHLIDALQQEAEVVALSAQDQEIVGLVILSF AHDAAGQRNLGYLFTRRAWGQGYASEMLRALQDQLRGTHVVLSGGVMAENAASARVLEKCGFEPGEKTASGEMTYVWDAA QG
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17484; Mature: 17484
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELKDLKSGRLHATEPVQMTAADREALFAPEVVAFLPPGFQNLGSDAARRHLIDALQQEA CCCCCCCCCCEECCCCEEEECCCCHHHHCCHHHHHCCCCHHHCCHHHHHHHHHHHHHHHH EVVALSAQDQEIVGLVILSFAHDAAGQRNLGYLFTRRAWGQGYASEMLRALQDQLRGTHV HEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEE VLSGGVMAENAASARVLEKCGFEPGEKTASGEMTYVWDAAQG EEECCEEECCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC >Mature Secondary Structure MELKDLKSGRLHATEPVQMTAADREALFAPEVVAFLPPGFQNLGSDAARRHLIDALQQEA CCCCCCCCCCEECCCCEEEECCCCHHHHCCHHHHHCCCCHHHCCHHHHHHHHHHHHHHHH EVVALSAQDQEIVGLVILSFAHDAAGQRNLGYLFTRRAWGQGYASEMLRALQDQLRGTHV HEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEE VLSGGVMAENAASARVLEKCGFEPGEKTASGEMTYVWDAAQG EEECCEEECCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA