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The map label for this gene is 99081988

Identifier: 99081988

GI number: 99081988

Start: 2255558

End: 2256244

Strand: Direct

Name: 99081988

Synonym: TM1040_2148

Alternate gene names: NA

Gene position: 2255558-2256244 (Clockwise)

Preceding gene: 99081974

Following gene: 99081989

Centisome position: 70.47

GC content: 60.84

Gene sequence:

>687_bases
ATGCAACTGCCCTCTGTTTTCGCCGTTCTTTCCCGTCTCGATTGCCATTACCGACTAATGTCGGTAATAGAGTGTATGCG
TACCCGCCTCTCCCGCAGTGCCCGCAGGGCCGAAATCCTAGGAAACGCCCAAAAGCTGATCGCCGCGCGTGGCTTCAGTG
GCACCGAGATGGAAGACATTCGCCTTGCCAGCGGCATTTCACGGGGCGGGCTCTATCATCATTTTGCCAACAAGCATGCG
GTCCTTGATGCGCTGGTAGCAGAGGAGGTGCGCCGTCTTGCAGACCAGCTAAAAGCCGCGCAAGGCTCTCCGATCCCCGC
GCTTCTTCGCGTAGGGTCAAGCGACCTTGGCAATGATCCCGGTCTGGTCTCGCATCTTCACACGCCCGAGGAGAAACGCG
CTTACCTGTCGAGCCTTGAACAGGCGATACCCGCAGAGCTCGGCCCGGTCCTGCACGAAAGACTGCGGGGCCACACCGCT
GAGGGCGCAGCCCCCGCCCATGTCGCCGAGCTCTTTTTGACGATCACCGCTCATATCAACCGCCGCCGCATATTGAACGA
GTGGCCCCCAGAAGAGGCAGCGGGATTTACCGCGACAGCGCTTCGGGCTCTGTTGCCCTTGCTGACATCGCAAGCGGAGC
TCCAGCCGGTCATCGCAGAACTGAAGCGGGTGGCGGCGACATCCTGA

Upstream 100 bases:

>100_bases
GTTTGAGCCTGCGCTCCTAGCCCACGGGCGACAAAACCACAGTCTATTTGCGCTAGGTGGGCACGAACTAGGCACTTATG
TCCAGTGCAATTTCATCTCC

Downstream 100 bases:

>100_bases
TGCTGATCGGTTTTCTCGCGCTAACCTTTGGCATTTCGCTTTTGAGCTTTGCCTGCGTTGTTGCGATCCCGGCGGCCCGA
ACGCCCGAAAGCGCTGCAGG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MQLPSVFAVLSRLDCHYRLMSVIECMRTRLSRSARRAEILGNAQKLIAARGFSGTEMEDIRLASGISRGGLYHHFANKHA
VLDALVAEEVRRLADQLKAAQGSPIPALLRVGSSDLGNDPGLVSHLHTPEEKRAYLSSLEQAIPAELGPVLHERLRGHTA
EGAAPAHVAELFLTITAHINRRRILNEWPPEEAAGFTATALRALLPLLTSQAELQPVIAELKRVAATS

Sequences:

>Translated_228_residues
MQLPSVFAVLSRLDCHYRLMSVIECMRTRLSRSARRAEILGNAQKLIAARGFSGTEMEDIRLASGISRGGLYHHFANKHA
VLDALVAEEVRRLADQLKAAQGSPIPALLRVGSSDLGNDPGLVSHLHTPEEKRAYLSSLEQAIPAELGPVLHERLRGHTA
EGAAPAHVAELFLTITAHINRRRILNEWPPEEAAGFTATALRALLPLLTSQAELQPVIAELKRVAATS
>Mature_228_residues
MQLPSVFAVLSRLDCHYRLMSVIECMRTRLSRSARRAEILGNAQKLIAARGFSGTEMEDIRLASGISRGGLYHHFANKHA
VLDALVAEEVRRLADQLKAAQGSPIPALLRVGSSDLGNDPGLVSHLHTPEEKRAYLSSLEQAIPAELGPVLHERLRGHTA
EGAAPAHVAELFLTITAHINRRRILNEWPPEEAAGFTATALRALLPLLTSQAELQPVIAELKRVAATS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24818; Mature: 24818

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLPSVFAVLSRLDCHYRLMSVIECMRTRLSRSARRAEILGNAQKLIAARGFSGTEMEDI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
RLASGISRGGLYHHFANKHAVLDALVAEEVRRLADQLKAAQGSPIPALLRVGSSDLGNDP
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCC
GLVSHLHTPEEKRAYLSSLEQAIPAELGPVLHERLRGHTAEGAAPAHVAELFLTITAHIN
CHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
RRRILNEWPPEEAAGFTATALRALLPLLTSQAELQPVIAELKRVAATS
HHHHHHCCCCHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQLPSVFAVLSRLDCHYRLMSVIECMRTRLSRSARRAEILGNAQKLIAARGFSGTEMEDI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
RLASGISRGGLYHHFANKHAVLDALVAEEVRRLADQLKAAQGSPIPALLRVGSSDLGNDP
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCC
GLVSHLHTPEEKRAYLSSLEQAIPAELGPVLHERLRGHTAEGAAPAHVAELFLTITAHIN
CHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
RRRILNEWPPEEAAGFTATALRALLPLLTSQAELQPVIAELKRVAATS
HHHHHHCCCCHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA