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The map label for this gene is kpsC [H]

Identifier: 99081974

GI number: 99081974

Start: 2239477

End: 2241516

Strand: Direct

Name: kpsC [H]

Synonym: TM1040_2134

Alternate gene names: 99081974

Gene position: 2239477-2241516 (Clockwise)

Preceding gene: 99081973

Following gene: 99081988

Centisome position: 69.96

GC content: 62.65

Gene sequence:

>2040_bases
ATGATGCAAGGGCCTTTGCCGCATCTGGACGAGACCAGAACCGGGAGCAAACGCTCCCGGTTGTTTGTGTATAACGGAGG
GTTTCTGACCCAGTCCCGTGTCCGGCGCATTCTTGATCTAGCGGGCTATGACATTCGTCTGGGCCTGCCCAAAGAGGGCG
ATCTGGTCGGGATCTGGGGCAACAGCCCCACCGCCCATCGCGGCCGCAAGATTGCCCAAGAGCATAACGCGCCCTTGGTG
CGCATTGAGGATGCGTTCCTGCGCTCGGTGCATCCGGGCCGCGATGGCGAGCCCCCGATGGGATTGCTGATTGACCGCGC
TGGCGTGCATTTTGACCCGGCCCTTCCAAGCGACCTCATCACGCTCCTGAAAGAACACCCACTCGATGACAGCGCCTTGA
TGAAGCGCGCGCGCGACGCCATGGCAAGGCTTCAGGACGCGCATCTGAGCAAATACAACGCCTTCCATCCCGATGTTCCC
CCACCAGAACCCGGCTACGTGCTGGTGGTGGATCAATTGCGCGACGATGCGTCCGTCAAGGCCTCGATCCCCTTCCCCGG
CGCGGACCGGGGACGCTTTCAGGAAATGCTGGCCTTTGCGCGCGAAGAAAACCCCGGCGCGCGCGTATTGATCAAGACCC
ATCCGGAAACCACCAAGGGCCACCGTGCCGGCTATTTCGACGCGCGTGACACCAATGATCAGGTGGAACTCTTTGATGCG
CCAGTCTCGCCACATCTGCTGCTCGAGGGCGCTGTGGGCGTCTATACCGTGTCGTCGCAACTCGGGTTCGAGGCCATCCT
TTCCGGGCACAGGCCGCGTATCTTTGGCCAGCCTTTCTATGCCGGATGGGGCCTGACGCAGGATGAGTTCCCCCCCGCGG
GGCGTCATCGTCGCCTGACCCGCGCACAGCTTTTTGCGGCGGCCATGATCCTCTTTCCCACCTGGTATGATCCCCATCAC
GACCGGCTTTGCGAGCTGGAGGACGTGATCGACTCTCTGGAGGCGCAGGTCCGGGCCTGGCGCGAAGACCGCGCTGGCTG
GGCTGCCTCAGAGATGCGTCTGTGGAAGCGCGCGCCCTTGCAGCAGTTCTTCGGGCGCCACAAGCGCATGAGTTTCACCG
AAAAAACCGCAACTGCCAAAAAGAGCGGCAAGAACTGGATGGTCTGGGCCAGCAAGGCGACCAAGGATCACGCCGGGGCG
CATCATCTGGAAGATGGATTCTTGCGCTCGCGGGGGCTCGGGGCTGAACTGGTGCCGCCCTTGTCATTGGTGCTGGATCG
TCAGGGCATTTATTATGACCCGACCCGTCACAGTGATCTGGATGACCTGATCCGCGAACGCGTCACGCTGAGCCCGCAGC
AGGAACGCCGGATCGAGGCGCTGGTGATGCGGCTCATCAAACATGAGGTGACAAAATACAATCTCGATGGCGCACTGCCC
GATTTGCCCAAAGGGCATCGGGTTCTGGTGCCCGGCCAGGTCGAGGATGATGCCTCCCTGCGGCTCGGAGCGGGTAAGAT
CAACACCAATATGAAGCTGTTGCAGGCCGTGCGGGCTGCGCGCCCGAATGCGGTCGTGATTTACAAACCGCACCCGGATG
TGGAGGCAGGCCTGCGCAAGGGCCGCATCAGCCACGCCGAGGCCTGGGCGGATGTGGTGGCAGAGCATGCCAACCCGGCG
GCGCTGATCGACAGTGTCGATGAGGTCTGGACCATGACGTCGCTCCTGGGGTTTGAGGCTTTGTTGCGGCGGGTGCCGGT
CACCTGTGTGGGGCTGCCGTTTTATGCTGGATGGGGGCTGACGCGGGATCGGCTTCAGGCGCCCCATTGGCGCGATGCGC
GCCCTGGTATCCTTGGGCTCGCCCATGCGGCGCTCATCGACTATCCGCGCTATTTTGATCCGGTCTCAAAGCTGCCCTGC
GCGCCCGAGGTTGCTGTCGATCGGCTGATTGCCGGAGAGCTGCCTGCGCGCAGCCCCCTGAACAGCAGCCTCTCGAAATT
GCAGGGGCTCTTTGCCTCATTTGCTCCGCTCTGGCGCTGA

Upstream 100 bases:

>100_bases
AGCACCCTATGCCCAATGGACCAAGACGCTGTCTCTTCTGACCAGCCCGCTGTCCACGGCTGCAAGTGTCGAGACCCTGT
TCGGCGGCAGTTAAGCAGCA

Downstream 100 bases:

>100_bases
GGGGGAAGCGAGGCGCTGCCTCGCGCTCCGGGATATTTGAGTTAGAAGAAAGCCTGCGCTATCCGCTCAGTTCTGAGGGC
GACGCCAGCGGTGCAGGATG

Product: capsule polysaccharide biosynthesis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 679; Mature: 679

Protein sequence:

>679_residues
MMQGPLPHLDETRTGSKRSRLFVYNGGFLTQSRVRRILDLAGYDIRLGLPKEGDLVGIWGNSPTAHRGRKIAQEHNAPLV
RIEDAFLRSVHPGRDGEPPMGLLIDRAGVHFDPALPSDLITLLKEHPLDDSALMKRARDAMARLQDAHLSKYNAFHPDVP
PPEPGYVLVVDQLRDDASVKASIPFPGADRGRFQEMLAFAREENPGARVLIKTHPETTKGHRAGYFDARDTNDQVELFDA
PVSPHLLLEGAVGVYTVSSQLGFEAILSGHRPRIFGQPFYAGWGLTQDEFPPAGRHRRLTRAQLFAAAMILFPTWYDPHH
DRLCELEDVIDSLEAQVRAWREDRAGWAASEMRLWKRAPLQQFFGRHKRMSFTEKTATAKKSGKNWMVWASKATKDHAGA
HHLEDGFLRSRGLGAELVPPLSLVLDRQGIYYDPTRHSDLDDLIRERVTLSPQQERRIEALVMRLIKHEVTKYNLDGALP
DLPKGHRVLVPGQVEDDASLRLGAGKINTNMKLLQAVRAARPNAVVIYKPHPDVEAGLRKGRISHAEAWADVVAEHANPA
ALIDSVDEVWTMTSLLGFEALLRRVPVTCVGLPFYAGWGLTRDRLQAPHWRDARPGILGLAHAALIDYPRYFDPVSKLPC
APEVAVDRLIAGELPARSPLNSSLSKLQGLFASFAPLWR

Sequences:

>Translated_679_residues
MMQGPLPHLDETRTGSKRSRLFVYNGGFLTQSRVRRILDLAGYDIRLGLPKEGDLVGIWGNSPTAHRGRKIAQEHNAPLV
RIEDAFLRSVHPGRDGEPPMGLLIDRAGVHFDPALPSDLITLLKEHPLDDSALMKRARDAMARLQDAHLSKYNAFHPDVP
PPEPGYVLVVDQLRDDASVKASIPFPGADRGRFQEMLAFAREENPGARVLIKTHPETTKGHRAGYFDARDTNDQVELFDA
PVSPHLLLEGAVGVYTVSSQLGFEAILSGHRPRIFGQPFYAGWGLTQDEFPPAGRHRRLTRAQLFAAAMILFPTWYDPHH
DRLCELEDVIDSLEAQVRAWREDRAGWAASEMRLWKRAPLQQFFGRHKRMSFTEKTATAKKSGKNWMVWASKATKDHAGA
HHLEDGFLRSRGLGAELVPPLSLVLDRQGIYYDPTRHSDLDDLIRERVTLSPQQERRIEALVMRLIKHEVTKYNLDGALP
DLPKGHRVLVPGQVEDDASLRLGAGKINTNMKLLQAVRAARPNAVVIYKPHPDVEAGLRKGRISHAEAWADVVAEHANPA
ALIDSVDEVWTMTSLLGFEALLRRVPVTCVGLPFYAGWGLTRDRLQAPHWRDARPGILGLAHAALIDYPRYFDPVSKLPC
APEVAVDRLIAGELPARSPLNSSLSKLQGLFASFAPLWR
>Mature_679_residues
MMQGPLPHLDETRTGSKRSRLFVYNGGFLTQSRVRRILDLAGYDIRLGLPKEGDLVGIWGNSPTAHRGRKIAQEHNAPLV
RIEDAFLRSVHPGRDGEPPMGLLIDRAGVHFDPALPSDLITLLKEHPLDDSALMKRARDAMARLQDAHLSKYNAFHPDVP
PPEPGYVLVVDQLRDDASVKASIPFPGADRGRFQEMLAFAREENPGARVLIKTHPETTKGHRAGYFDARDTNDQVELFDA
PVSPHLLLEGAVGVYTVSSQLGFEAILSGHRPRIFGQPFYAGWGLTQDEFPPAGRHRRLTRAQLFAAAMILFPTWYDPHH
DRLCELEDVIDSLEAQVRAWREDRAGWAASEMRLWKRAPLQQFFGRHKRMSFTEKTATAKKSGKNWMVWASKATKDHAGA
HHLEDGFLRSRGLGAELVPPLSLVLDRQGIYYDPTRHSDLDDLIRERVTLSPQQERRIEALVMRLIKHEVTKYNLDGALP
DLPKGHRVLVPGQVEDDASLRLGAGKINTNMKLLQAVRAARPNAVVIYKPHPDVEAGLRKGRISHAEAWADVVAEHANPA
ALIDSVDEVWTMTSLLGFEALLRRVPVTCVGLPFYAGWGLTRDRLQAPHWRDARPGILGLAHAALIDYPRYFDPVSKLPC
APEVAVDRLIAGELPARSPLNSSLSKLQGLFASFAPLWR

Specific function: Unknown

COG id: COG3563

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti lipopolysaccharide processing protein lpsZ [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007833 [H]

Pfam domain/function: PF05159 Capsule_synth [H]

EC number: NA

Molecular weight: Translated: 75832; Mature: 75832

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQGPLPHLDETRTGSKRSRLFVYNGGFLTQSRVRRILDLAGYDIRLGLPKEGDLVGIWG
CCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCEEEECC
NSPTAHRGRKIAQEHNAPLVRIEDAFLRSVHPGRDGEPPMGLLIDRAGVHFDPALPSDLI
CCCCHHHHHHHHHHCCCCEEEECHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCHHHH
TLLKEHPLDDSALMKRARDAMARLQDAHLSKYNAFHPDVPPPEPGYVLVVDQLRDDASVK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEE
ASIPFPGADRGRFQEMLAFAREENPGARVLIKTHPETTKGHRAGYFDARDTNDQVELFDA
EECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEC
PVSPHLLLEGAVGVYTVSSQLGFEAILSGHRPRIFGQPFYAGWGLTQDEFPPAGRHRRLT
CCCCCEEEECCCEEEEECHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
RAQLFAAAMILFPTWYDPHHDRLCELEDVIDSLEAQVRAWREDRAGWAASEMRLWKRAPL
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCH
QQFFGRHKRMSFTEKTATAKKSGKNWMVWASKATKDHAGAHHLEDGFLRSRGLGAELVPP
HHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
LSLVLDRQGIYYDPTRHSDLDDLIRERVTLSPQQERRIEALVMRLIKHEVTKYNLDGALP
HHHHCCCCCCEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCC
DLPKGHRVLVPGQVEDDASLRLGAGKINTNMKLLQAVRAARPNAVVIYKPHPDVEAGLRK
CCCCCCEEEECCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHH
GRISHAEAWADVVAEHANPAALIDSVDEVWTMTSLLGFEALLRRVPVTCVGLPFYAGWGL
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHCCCC
TRDRLQAPHWRDARPGILGLAHAALIDYPRYFDPVSKLPCAPEVAVDRLIAGELPARSPL
CHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHCCHHHHCCCCHHHHHHHHHHCCCCCCCCC
NSSLSKLQGLFASFAPLWR
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMQGPLPHLDETRTGSKRSRLFVYNGGFLTQSRVRRILDLAGYDIRLGLPKEGDLVGIWG
CCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCEEEECC
NSPTAHRGRKIAQEHNAPLVRIEDAFLRSVHPGRDGEPPMGLLIDRAGVHFDPALPSDLI
CCCCHHHHHHHHHHCCCCEEEECHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCHHHH
TLLKEHPLDDSALMKRARDAMARLQDAHLSKYNAFHPDVPPPEPGYVLVVDQLRDDASVK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEE
ASIPFPGADRGRFQEMLAFAREENPGARVLIKTHPETTKGHRAGYFDARDTNDQVELFDA
EECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEC
PVSPHLLLEGAVGVYTVSSQLGFEAILSGHRPRIFGQPFYAGWGLTQDEFPPAGRHRRLT
CCCCCEEEECCCEEEEECHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
RAQLFAAAMILFPTWYDPHHDRLCELEDVIDSLEAQVRAWREDRAGWAASEMRLWKRAPL
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCH
QQFFGRHKRMSFTEKTATAKKSGKNWMVWASKATKDHAGAHHLEDGFLRSRGLGAELVPP
HHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
LSLVLDRQGIYYDPTRHSDLDDLIRERVTLSPQQERRIEALVMRLIKHEVTKYNLDGALP
HHHHCCCCCCEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCC
DLPKGHRVLVPGQVEDDASLRLGAGKINTNMKLLQAVRAARPNAVVIYKPHPDVEAGLRK
CCCCCCEEEECCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHH
GRISHAEAWADVVAEHANPAALIDSVDEVWTMTSLLGFEALLRRVPVTCVGLPFYAGWGL
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHCCCC
TRDRLQAPHWRDARPGILGLAHAALIDYPRYFDPVSKLPCAPEVAVDRLIAGELPARSPL
CHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHCCHHHHCCCCHHHHHHHHHHCCCCCCCCC
NSSLSKLQGLFASFAPLWR
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8397187; 7875563 [H]