Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081980

Identifier: 99081980

GI number: 99081980

Start: 2244894

End: 2245364

Strand: Reverse

Name: 99081980

Synonym: TM1040_2140

Alternate gene names: NA

Gene position: 2245364-2244894 (Counterclockwise)

Preceding gene: 99081981

Following gene: 99081979

Centisome position: 70.15

GC content: 58.39

Gene sequence:

>471_bases
ATGACATCCATATTCAAAATCGCCCCGATATTTGCGGTGTTTATTGCAGCCCCGGCGTTATCATGTCCGCAAGGCGCGAC
CCCTCTGGTATCTTGCAGCTTGAAATCCGGCAGCGCCTATCTTGAGACCTGCCGATTGGGCAACTTCGCAACCTATGCCT
ATGGAAAGACGGGACAACGTCCGGATCTCGCGCTCGCTCGTCCCGTGCAGGAGGTGGAGATGACCCCATGGCCCGGCGTG
GGGCGTAGCATCTGGGAGGACTTCCAGTTTCGCAACGGAGATGTCTCTTATCGGGTCTTTTACAGTATTGATCGCTTCTC
GGAGGGCGAGCCCGCTCTGACCGCGGGGGTCATGGTCGAAAAGGGTGAGGAAACCTTGGCAGAGCTGGATTGCGATCCTG
GCACAATCGATGCGGGCTATCCGTTGCCCCTGTGGGACGCGCAAGAACTGGCCGCGCAGGCCCGGAATTGA

Upstream 100 bases:

>100_bases
AGCGTGCGGGATCCTGCACCCCCTCTGTTATATGGGCGCAGCATGTGATCTGAACGTGCGAAAGGTATTGTCCAAGGTTT
TGTCGAAAGGTCAAAATGAC

Downstream 100 bases:

>100_bases
CCGACACCTCTGGCCTTTCACGGTAGACTCACGAGCGCGGCGCAAAGCGAACTTCTGGCTATGCGGACACGCCGCGCCGG
AGCGCGCATTTTGTTAACCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MTSIFKIAPIFAVFIAAPALSCPQGATPLVSCSLKSGSAYLETCRLGNFATYAYGKTGQRPDLALARPVQEVEMTPWPGV
GRSIWEDFQFRNGDVSYRVFYSIDRFSEGEPALTAGVMVEKGEETLAELDCDPGTIDAGYPLPLWDAQELAAQARN

Sequences:

>Translated_156_residues
MTSIFKIAPIFAVFIAAPALSCPQGATPLVSCSLKSGSAYLETCRLGNFATYAYGKTGQRPDLALARPVQEVEMTPWPGV
GRSIWEDFQFRNGDVSYRVFYSIDRFSEGEPALTAGVMVEKGEETLAELDCDPGTIDAGYPLPLWDAQELAAQARN
>Mature_155_residues
TSIFKIAPIFAVFIAAPALSCPQGATPLVSCSLKSGSAYLETCRLGNFATYAYGKTGQRPDLALARPVQEVEMTPWPGVG
RSIWEDFQFRNGDVSYRVFYSIDRFSEGEPALTAGVMVEKGEETLAELDCDPGTIDAGYPLPLWDAQELAAQARN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16947; Mature: 16816

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSIFKIAPIFAVFIAAPALSCPQGATPLVSCSLKSGSAYLETCRLGNFATYAYGKTGQR
CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCEEEEEECCCCCC
PDLALARPVQEVEMTPWPGVGRSIWEDFQFRNGDVSYRVFYSIDRFSEGEPALTAGVMVE
CCCHHHCCHHHCCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCEEECEEEE
KGEETLAELDCDPGTIDAGYPLPLWDAQELAAQARN
CCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
TSIFKIAPIFAVFIAAPALSCPQGATPLVSCSLKSGSAYLETCRLGNFATYAYGKTGQR
CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCEEEEEECCCCCC
PDLALARPVQEVEMTPWPGVGRSIWEDFQFRNGDVSYRVFYSIDRFSEGEPALTAGVMVE
CCCHHHCCHHHCCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCEEECEEEE
KGEETLAELDCDPGTIDAGYPLPLWDAQELAAQARN
CCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA