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The map label for this gene is yjbQ [C]

Identifier: 99081977

GI number: 99081977

Start: 2243348

End: 2243776

Strand: Reverse

Name: yjbQ [C]

Synonym: TM1040_2137

Alternate gene names: 99081977

Gene position: 2243776-2243348 (Counterclockwise)

Preceding gene: 99081978

Following gene: 99081976

Centisome position: 70.1

GC content: 58.51

Gene sequence:

>429_bases
ATGAGCAACATCCAACAGCGCACCTTTACGCTCTCTACCCACGGCCAGGGTCTCTACGAGATCACCGATGAGATCCGCAG
CTTTGTCCGCTCAAGCGGTGCTGTTCAGGCGCTGCTCACTCTCTATGTGCGCCATACCTCTTGCTCGCTCCTCATCCAAG
AGAACGCAGACCCGGAGGTGCAGGGGGATCTCAAGGCCTATTTTGCGCGCTTGGTGCCCCCGACGACCGATCCGCAGATG
TCCTACCTGCGCCATACCTATGAAGGCCCCGACGACATGCCTGCGCATATCAAGGCGGCGATGATGCCGGTGAGTCTCTC
GATCCCCGTTTCGAGCGCCGAGATGGTCTTGGGCACATGGCAGGGGATTTATCTTTTTGAGCACCGTGACGCTCCACATC
AGCGCCAAATCGTTGCTCATCTGGCCTGA

Upstream 100 bases:

>100_bases
TTCATCAAGACGTTCGGTTTCAAGCCCGGCGACAATTTCAGCGTTTCCACCGGCGAAAGCCTCTGTCGAGACATTGAGCC
GGTGTTCTTCTTCTGATCGC

Downstream 100 bases:

>100_bases
CAACTGGGCGAACCCCCACCGGCGCCACCAAGGTCTTGGGGTCGCATTTCCCCTCTACCCAAATCCTAGCTGGTCCCCTA
TAGTTGTGGATAAATGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSNIQQRTFTLSTHGQGLYEITDEIRSFVRSSGAVQALLTLYVRHTSCSLLIQENADPEVQGDLKAYFARLVPPTTDPQM
SYLRHTYEGPDDMPAHIKAAMMPVSLSIPVSSAEMVLGTWQGIYLFEHRDAPHQRQIVAHLA

Sequences:

>Translated_142_residues
MSNIQQRTFTLSTHGQGLYEITDEIRSFVRSSGAVQALLTLYVRHTSCSLLIQENADPEVQGDLKAYFARLVPPTTDPQM
SYLRHTYEGPDDMPAHIKAAMMPVSLSIPVSSAEMVLGTWQGIYLFEHRDAPHQRQIVAHLA
>Mature_141_residues
SNIQQRTFTLSTHGQGLYEITDEIRSFVRSSGAVQALLTLYVRHTSCSLLIQENADPEVQGDLKAYFARLVPPTTDPQMS
YLRHTYEGPDDMPAHIKAAMMPVSLSIPVSSAEMVLGTWQGIYLFEHRDAPHQRQIVAHLA

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=137, Percent_Identity=43.0656934306569, Blast_Score=110, Evalue=3e-26,
Organism=Drosophila melanogaster, GI221476589, Length=137, Percent_Identity=38.6861313868613, Blast_Score=102, Evalue=1e-22,
Organism=Drosophila melanogaster, GI221476594, Length=137, Percent_Identity=38.6861313868613, Blast_Score=101, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15911; Mature: 15780

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNIQQRTFTLSTHGQGLYEITDEIRSFVRSSGAVQALLTLYVRHTSCSLLIQENADPEV
CCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEECCCCCCC
QGDLKAYFARLVPPTTDPQMSYLRHTYEGPDDMPAHIKAAMMPVSLSIPVSSAEMVLGTW
CHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCEEEEECCCCCCCEEEECC
QGIYLFEHRDAPHQRQIVAHLA
CEEEEEECCCCCHHHHHHHHCC
>Mature Secondary Structure 
SNIQQRTFTLSTHGQGLYEITDEIRSFVRSSGAVQALLTLYVRHTSCSLLIQENADPEV
CCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEECCCCCCC
QGDLKAYFARLVPPTTDPQMSYLRHTYEGPDDMPAHIKAAMMPVSLSIPVSSAEMVLGTW
CHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCEEEEECCCCCCCEEEECC
QGIYLFEHRDAPHQRQIVAHLA
CEEEEEECCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]