Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081959

Identifier: 99081959

GI number: 99081959

Start: 2225035

End: 2225343

Strand: Direct

Name: 99081959

Synonym: TM1040_2119

Alternate gene names: NA

Gene position: 2225035-2225343 (Clockwise)

Preceding gene: 99081957

Following gene: 99081960

Centisome position: 69.51

GC content: 58.58

Gene sequence:

>309_bases
ATGACACATCCTTCCGAACCTGAAGACATTACCGAACCGACGCAGCTGCGTTTCCTGCGCCGTCTCGTGACCACGTTGAC
CGTGATCATGGTGGGCGGGGTTCTAGTGGTTATTGCGTTGCTTGTCATCCGTTTGTCGGATGATACCCACGCACCGCAAG
TGCCGGCAGATATTTCCTTGCCCGAGGGCGCCACCGCGCGTGCCGTGACCTTTGGCAGCGGCTGGCTGGCGGTGGTAACG
ACAGAAGATCAGATCCTGATCCTCGACAGTGAAACCGGCGCCCTGCGCCAGCAAATTCAGATCGACTAG

Upstream 100 bases:

>100_bases
GCGCGACAGGTTCGCTTCCTCTGGCACATCGCGCGCAATCGCTTTATCAAGCCGCTTGGGCGGGTTGTCCGCGATCACAA
ATTCAATGCGGCGGCTGGCC

Downstream 100 bases:

>100_bases
GCCTCGCCCAAGCGACCAAACCCGACAGCTTTGCCGCCAGCGCGGCAAAGCATTGATCCCGCACCAATCGGCAAGATGCC
TGAATGTCGCACGCGAAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MTHPSEPEDITEPTQLRFLRRLVTTLTVIMVGGVLVVIALLVIRLSDDTHAPQVPADISLPEGATARAVTFGSGWLAVVT
TEDQILILDSETGALRQQIQID

Sequences:

>Translated_102_residues
MTHPSEPEDITEPTQLRFLRRLVTTLTVIMVGGVLVVIALLVIRLSDDTHAPQVPADISLPEGATARAVTFGSGWLAVVT
TEDQILILDSETGALRQQIQID
>Mature_101_residues
THPSEPEDITEPTQLRFLRRLVTTLTVIMVGGVLVVIALLVIRLSDDTHAPQVPADISLPEGATARAVTFGSGWLAVVTT
EDQILILDSETGALRQQIQID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11044; Mature: 10913

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHPSEPEDITEPTQLRFLRRLVTTLTVIMVGGVLVVIALLVIRLSDDTHAPQVPADISL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PEGATARAVTFGSGWLAVVTTEDQILILDSETGALRQQIQID
CCCCCEEEEEECCCEEEEEECCCEEEEEECCCCHHHHEECCC
>Mature Secondary Structure 
THPSEPEDITEPTQLRFLRRLVTTLTVIMVGGVLVVIALLVIRLSDDTHAPQVPADISL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PEGATARAVTFGSGWLAVVTTEDQILILDSETGALRQQIQID
CCCCCEEEEEECCCEEEEEECCCEEEEEECCCCHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA