| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081942
Identifier: 99081942
GI number: 99081942
Start: 2207938
End: 2208177
Strand: Reverse
Name: 99081942
Synonym: TM1040_2102
Alternate gene names: NA
Gene position: 2208177-2207938 (Counterclockwise)
Preceding gene: 99081943
Following gene: 99081941
Centisome position: 68.99
GC content: 60.0
Gene sequence:
>240_bases ATGCCGGCAGCAGGCGAAGATGAGCCGGCATTGAATATTTGCCGCGAGACATCAGCTGTTGACCAAGCGCTTGAGGCCGG CGTTGATCGCGGGCCTGCTGGCGCGGGTGGATACGGTGATCGCGGTGTGAAGACTGCGCGCTCCAAAGCGCTGATCCGGT TGCTCACGCAGTTGCGCCTTTTCCCATCGCGCTCTTGGCGTTATGAGGAACAGGTTCGCCAAGGAGCTCAGACGATATGA
Upstream 100 bases:
>100_bases CGCGTCGCGCGCCCTCAGGGCGCGCGACGCCCCCTTTCGAAACGGGGGCTTTATCGAGGGGCAGTCTGAGCGCACTGCCT GACGATGTGTCACGCCGGAA
Downstream 100 bases:
>100_bases CCCAAATCACGCCGCAACCCGGTATCATGGACATCGCGCTTTATCAGGGGGGCGCGGCCCACGTGGACGGGGTGAGCAAT GTGACCAAGCTTTCCTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MPAAGEDEPALNICRETSAVDQALEAGVDRGPAGAGGYGDRGVKTARSKALIRLLTQLRLFPSRSWRYEEQVRQGAQTI
Sequences:
>Translated_79_residues MPAAGEDEPALNICRETSAVDQALEAGVDRGPAGAGGYGDRGVKTARSKALIRLLTQLRLFPSRSWRYEEQVRQGAQTI >Mature_78_residues PAAGEDEPALNICRETSAVDQALEAGVDRGPAGAGGYGDRGVKTARSKALIRLLTQLRLFPSRSWRYEEQVRQGAQTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8529; Mature: 8397
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAGEDEPALNICRETSAVDQALEAGVDRGPAGAGGYGDRGVKTARSKALIRLLTQLRL CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH FPSRSWRYEEQVRQGAQTI CCCCCCCCHHHHHHHHCCC >Mature Secondary Structure PAAGEDEPALNICRETSAVDQALEAGVDRGPAGAGGYGDRGVKTARSKALIRLLTQLRL CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH FPSRSWRYEEQVRQGAQTI CCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA