Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081942

Identifier: 99081942

GI number: 99081942

Start: 2207938

End: 2208177

Strand: Reverse

Name: 99081942

Synonym: TM1040_2102

Alternate gene names: NA

Gene position: 2208177-2207938 (Counterclockwise)

Preceding gene: 99081943

Following gene: 99081941

Centisome position: 68.99

GC content: 60.0

Gene sequence:

>240_bases
ATGCCGGCAGCAGGCGAAGATGAGCCGGCATTGAATATTTGCCGCGAGACATCAGCTGTTGACCAAGCGCTTGAGGCCGG
CGTTGATCGCGGGCCTGCTGGCGCGGGTGGATACGGTGATCGCGGTGTGAAGACTGCGCGCTCCAAAGCGCTGATCCGGT
TGCTCACGCAGTTGCGCCTTTTCCCATCGCGCTCTTGGCGTTATGAGGAACAGGTTCGCCAAGGAGCTCAGACGATATGA

Upstream 100 bases:

>100_bases
CGCGTCGCGCGCCCTCAGGGCGCGCGACGCCCCCTTTCGAAACGGGGGCTTTATCGAGGGGCAGTCTGAGCGCACTGCCT
GACGATGTGTCACGCCGGAA

Downstream 100 bases:

>100_bases
CCCAAATCACGCCGCAACCCGGTATCATGGACATCGCGCTTTATCAGGGGGGCGCGGCCCACGTGGACGGGGTGAGCAAT
GTGACCAAGCTTTCCTCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MPAAGEDEPALNICRETSAVDQALEAGVDRGPAGAGGYGDRGVKTARSKALIRLLTQLRLFPSRSWRYEEQVRQGAQTI

Sequences:

>Translated_79_residues
MPAAGEDEPALNICRETSAVDQALEAGVDRGPAGAGGYGDRGVKTARSKALIRLLTQLRLFPSRSWRYEEQVRQGAQTI
>Mature_78_residues
PAAGEDEPALNICRETSAVDQALEAGVDRGPAGAGGYGDRGVKTARSKALIRLLTQLRLFPSRSWRYEEQVRQGAQTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8529; Mature: 8397

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAAGEDEPALNICRETSAVDQALEAGVDRGPAGAGGYGDRGVKTARSKALIRLLTQLRL
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
FPSRSWRYEEQVRQGAQTI
CCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
PAAGEDEPALNICRETSAVDQALEAGVDRGPAGAGGYGDRGVKTARSKALIRLLTQLRL
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
FPSRSWRYEEQVRQGAQTI
CCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA