| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081933
Identifier: 99081933
GI number: 99081933
Start: 2198470
End: 2199066
Strand: Reverse
Name: 99081933
Synonym: TM1040_2093
Alternate gene names: NA
Gene position: 2199066-2198470 (Counterclockwise)
Preceding gene: 99081934
Following gene: 99081930
Centisome position: 68.7
GC content: 58.79
Gene sequence:
>597_bases ATGAGAGGATCTGACGGTTTTGCCCCTGGTCTGAGCGGATTTGGATTGATCGCGCTGACCTACATCGTTTGCCACGGCGT CACGATTTGGGTGATCGCCCCTGCGCAGCGTTTCTTTCTCGATGATGTGTCGGTGATCGCAAGCCTGGCCTATCTGCCGC ATGGCGTCAGGGTTCTGAGCATCTGGCTGGTAGGTTGGCGCGCGATCCTCCCGCTCATTGCTGGTGCAGTGGCCGCCAAC ATGATCTTTACCAGCTCGCATATTCTGGACTTGATGCAGGGCAAGATGTCGGTGTCGATCCTGATGAGCGTGTTGTCCGC CTATGCCGCGTTTGAGGTGTTGCGCCTCCTTGGGGTCGCGTCTTATGCGGGTGGCGGGCGCAGGGTGAACTGGCGGACAC TGCTGCTGACCGGGCTGTTGGCATCGGTCTTCAACTCGGTGTGCCAGACGCTGATTTTCTCGGGCATCATTGCGCCGGAT GGGACGCTTTGGGAATTGGCATCCTTTGTTGTCGGAGACATGATCGGGCAGATCGTGCTGATGATCGCACTGATGATGAT CTTTCGCGCCCTGCGTGGGCCTGCAACCCGCGCCTGA
Upstream 100 bases:
>100_bases AATCTGACGCTTCATTTCATTATGTTACCGTAAAACAGTTTCCTCAAGGTCGTCGCCGAGAGGAATTGCCACCGCGCGTA TTCGCCTCTACAGCTTGGGT
Downstream 100 bases:
>100_bases TCTCTCGTTTTTTCTTCGAAAAGCGCCCGCGACCGCGGTTGGAGCGTGTGCCGCGGCCTCTTCGGCGCAGCATCGACCTT GTCGCGGCCTGCGGCAGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MRGSDGFAPGLSGFGLIALTYIVCHGVTIWVIAPAQRFFLDDVSVIASLAYLPHGVRVLSIWLVGWRAILPLIAGAVAAN MIFTSSHILDLMQGKMSVSILMSVLSAYAAFEVLRLLGVASYAGGGRRVNWRTLLLTGLLASVFNSVCQTLIFSGIIAPD GTLWELASFVVGDMIGQIVLMIALMMIFRALRGPATRA
Sequences:
>Translated_198_residues MRGSDGFAPGLSGFGLIALTYIVCHGVTIWVIAPAQRFFLDDVSVIASLAYLPHGVRVLSIWLVGWRAILPLIAGAVAAN MIFTSSHILDLMQGKMSVSILMSVLSAYAAFEVLRLLGVASYAGGGRRVNWRTLLLTGLLASVFNSVCQTLIFSGIIAPD GTLWELASFVVGDMIGQIVLMIALMMIFRALRGPATRA >Mature_198_residues MRGSDGFAPGLSGFGLIALTYIVCHGVTIWVIAPAQRFFLDDVSVIASLAYLPHGVRVLSIWLVGWRAILPLIAGAVAAN MIFTSSHILDLMQGKMSVSILMSVLSAYAAFEVLRLLGVASYAGGGRRVNWRTLLLTGLLASVFNSVCQTLIFSGIIAPD GTLWELASFVVGDMIGQIVLMIALMMIFRALRGPATRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21172; Mature: 21172
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGSDGFAPGLSGFGLIALTYIVCHGVTIWVIAPAQRFFLDDVSVIASLAYLPHGVRVLS CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHH IWLVGWRAILPLIAGAVAANMIFTSSHILDLMQGKMSVSILMSVLSAYAAFEVLRLLGVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SYAGGGRRVNWRTLLLTGLLASVFNSVCQTLIFSGIIAPDGTLWELASFVVGDMIGQIVL HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH MIALMMIFRALRGPATRA HHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRGSDGFAPGLSGFGLIALTYIVCHGVTIWVIAPAQRFFLDDVSVIASLAYLPHGVRVLS CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHH IWLVGWRAILPLIAGAVAANMIFTSSHILDLMQGKMSVSILMSVLSAYAAFEVLRLLGVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SYAGGGRRVNWRTLLLTGLLASVFNSVCQTLIFSGIIAPDGTLWELASFVVGDMIGQIVL HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH MIALMMIFRALRGPATRA HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA