| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is gloB [H]
Identifier: 99081931
GI number: 99081931
Start: 2194905
End: 2195720
Strand: Direct
Name: gloB [H]
Synonym: TM1040_2091
Alternate gene names: 99081931
Gene position: 2194905-2195720 (Clockwise)
Preceding gene: 99081922
Following gene: 99081932
Centisome position: 68.57
GC content: 59.56
Gene sequence:
>816_bases ATGACCATGCCCGATCAGACCTCTTTCCCCTCCACCGTGGCAAATGGCCTCGAAATCGTGACGGTTCCGTGTCTTGCGGA CAACTATGCCTACCTCGTCAAAGGACCCGATGGCGTGGCGCTGATCGATGCGCCCGAGGCCGAGCCGATCCTGACCGCTC TGGAGGCGCGGGACTGGTCGCTTGGGGTCATCATGATTACCCATCACCACCACGACCATGTGGGCGGTGTCGCCGCACTG CGTGAAAAATTCGGCTGCCCGGTCATGGGGCCCAAGGCCGAAGCCGATAAGATCGCAGCCCAGGGGGTCACACTGGATAT GGAACTGGAGCCCGGCTTTGAAGGCGGCACCGGTGCCGGGCGCTGCCAGGTGCTTGCAGTGCCGGGCCACACGCTCGGCC ACATCGCTTTTTATTATCCCGAGGCGCCGGCCCTGTTCAGCGCCGACAGCCTCATGGTGATGGGCTGTGGACGCCTTTTT GAGGGCACGCCCGCGATGATGTGGCAGACCATGACCACGCTTTCTGCGCTCCCTGACGAGACGCTGATCTATTCCGGTCA CGAATACACCGAGAGCAACGCAGGCTTTGCGCTCAGTCTGGAGCCGGAAAATGCAGCACTGCAAAAAAGAATGGATGAAA TCACCAAAACCCGTCAAAACGGCCAACCGACCGTCCCTGCCCTTCTGTCGCTCGAAAAACAGACCAACCCGTTCCTGCGA GCTGGCGATCCAAACCTGAAGAAAACGCTTGGTTTGGAAGGGGTTGAAGACGCAGAGGTCTTTGCCCATATCCGTGTGGC GAAGGATAAGTTCTGA
Upstream 100 bases:
>100_bases TGCTGCGGTAATAGAAATTCCTCAGATCCTGCACATCCAGATGCATTGCAGACGCTCACTGCTTCGGTCACTCTGGGGCA GTCTAGCAATGTGAAAGCGA
Downstream 100 bases:
>100_bases CACCAGTTTGTGGTCAGATGTGCATCGCCACACAAGATATGTGAACACAATCTCGGGAATTGTGACCACAATCGCGCAAA AAGCCCTTGAAGCTTACGAT
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MTMPDQTSFPSTVANGLEIVTVPCLADNYAYLVKGPDGVALIDAPEAEPILTALEARDWSLGVIMITHHHHDHVGGVAAL REKFGCPVMGPKAEADKIAAQGVTLDMELEPGFEGGTGAGRCQVLAVPGHTLGHIAFYYPEAPALFSADSLMVMGCGRLF EGTPAMMWQTMTTLSALPDETLIYSGHEYTESNAGFALSLEPENAALQKRMDEITKTRQNGQPTVPALLSLEKQTNPFLR AGDPNLKKTLGLEGVEDAEVFAHIRVAKDKF
Sequences:
>Translated_271_residues MTMPDQTSFPSTVANGLEIVTVPCLADNYAYLVKGPDGVALIDAPEAEPILTALEARDWSLGVIMITHHHHDHVGGVAAL REKFGCPVMGPKAEADKIAAQGVTLDMELEPGFEGGTGAGRCQVLAVPGHTLGHIAFYYPEAPALFSADSLMVMGCGRLF EGTPAMMWQTMTTLSALPDETLIYSGHEYTESNAGFALSLEPENAALQKRMDEITKTRQNGQPTVPALLSLEKQTNPFLR AGDPNLKKTLGLEGVEDAEVFAHIRVAKDKF >Mature_270_residues TMPDQTSFPSTVANGLEIVTVPCLADNYAYLVKGPDGVALIDAPEAEPILTALEARDWSLGVIMITHHHHDHVGGVAALR EKFGCPVMGPKAEADKIAAQGVTLDMELEPGFEGGTGAGRCQVLAVPGHTLGHIAFYYPEAPALFSADSLMVMGCGRLFE GTPAMMWQTMTTLSALPDETLIYSGHEYTESNAGFALSLEPENAALQKRMDEITKTRQNGQPTVPALLSLEKQTNPFLRA GDPNLKKTLGLEGVEDAEVFAHIRVAKDKF
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI116642887, Length=247, Percent_Identity=33.6032388663968, Blast_Score=137, Evalue=9e-33, Organism=Homo sapiens, GI21703352, Length=247, Percent_Identity=33.6032388663968, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI14150041, Length=244, Percent_Identity=35.655737704918, Blast_Score=135, Evalue=5e-32, Organism=Homo sapiens, GI94538320, Length=264, Percent_Identity=32.5757575757576, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI94538322, Length=270, Percent_Identity=32.962962962963, Blast_Score=132, Evalue=4e-31, Organism=Homo sapiens, GI46361987, Length=205, Percent_Identity=35.609756097561, Blast_Score=108, Evalue=4e-24, Organism=Escherichia coli, GI1786406, Length=259, Percent_Identity=41.3127413127413, Blast_Score=170, Evalue=9e-44, Organism=Escherichia coli, GI1787158, Length=135, Percent_Identity=35.5555555555556, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17536925, Length=260, Percent_Identity=31.9230769230769, Blast_Score=122, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6320478, Length=267, Percent_Identity=27.7153558052434, Blast_Score=82, Evalue=8e-17, Organism=Saccharomyces cerevisiae, GI6324614, Length=246, Percent_Identity=28.8617886178862, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI21356335, Length=265, Percent_Identity=34.7169811320755, Blast_Score=151, Evalue=6e-37, Organism=Drosophila melanogaster, GI24667711, Length=265, Percent_Identity=34.7169811320755, Blast_Score=150, Evalue=9e-37, Organism=Drosophila melanogaster, GI24667703, Length=265, Percent_Identity=34.7169811320755, Blast_Score=150, Evalue=1e-36, Organism=Drosophila melanogaster, GI221330176, Length=202, Percent_Identity=27.2277227722772, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 29091; Mature: 28959
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMPDQTSFPSTVANGLEIVTVPCLADNYAYLVKGPDGVALIDAPEAEPILTALEARDWS CCCCCCCCCCHHHHCCEEEEEEEEECCCCEEEEECCCCEEEEECCCCCHHHHHHHCCCCE LGVIMITHHHHDHVGGVAALREKFGCPVMGPKAEADKIAAQGVTLDMELEPGFEGGTGAG EEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCC RCQVLAVPGHTLGHIAFYYPEAPALFSADSLMVMGCGRLFEGTPAMMWQTMTTLSALPDE EEEEEEECCCCCCEEEEEECCCCCEECCCCEEEEECCHHHCCCHHHHHHHHHHHHHCCCC TLIYSGHEYTESNAGFALSLEPENAALQKRMDEITKTRQNGQPTVPALLSLEKQTNPFLR EEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCCEEE AGDPNLKKTLGLEGVEDAEVFAHIRVAKDKF CCCCCHHHHHCCCCCCHHHHEEEEEEECCCC >Mature Secondary Structure TMPDQTSFPSTVANGLEIVTVPCLADNYAYLVKGPDGVALIDAPEAEPILTALEARDWS CCCCCCCCCHHHHCCEEEEEEEEECCCCEEEEECCCCEEEEECCCCCHHHHHHHCCCCE LGVIMITHHHHDHVGGVAALREKFGCPVMGPKAEADKIAAQGVTLDMELEPGFEGGTGAG EEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCC RCQVLAVPGHTLGHIAFYYPEAPALFSADSLMVMGCGRLFEGTPAMMWQTMTTLSALPDE EEEEEEECCCCCCEEEEEECCCCCEECCCCEEEEECCHHHCCCHHHHHHHHHHHHHCCCC TLIYSGHEYTESNAGFALSLEPENAALQKRMDEITKTRQNGQPTVPALLSLEKQTNPFLR EEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCCEEE AGDPNLKKTLGLEGVEDAEVFAHIRVAKDKF CCCCCHHHHHCCCCCCHHHHEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA