| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081870
Identifier: 99081870
GI number: 99081870
Start: 2138667
End: 2139152
Strand: Reverse
Name: 99081870
Synonym: TM1040_2030
Alternate gene names: NA
Gene position: 2139152-2138667 (Counterclockwise)
Preceding gene: 99081872
Following gene: 99081867
Centisome position: 66.83
GC content: 61.73
Gene sequence:
>486_bases ATGAGACAGCCGCACCGCCCCGTGATCCGTTTTGTTCGCCTGTCCGAAATCGACCCGCAAGAGATCACGGCCCATATGTC CGATCCTCTGATGGCCGAGCACATGCCGCTCTTGGAAGGGGTGGAGTGGAATGCCGCGCAGACCGAGCAGTTTGTCGCAG CCAAAGAAGCCTGCTGGGCGCGCGACGGCCTGGGGCATTGGGGCATTCTCTCGGATGATGCCTATATCGGGTGGGGCGGT TTTCAGAAAGAGGACGAGGAGTGGGATTTCGGGTTGGTGCTGCGGCACAGCGCCTTTGGTCGGGGCATACAAGTCGCCAA GGCCGCCCTTGCGGTGGCGGCGCAGGACACGCGCATTCCCTTTGTGACTTTTCTTTTGCCGCCATCGCGTCGTCATCTCG GAGCGCTGCGGCGTCTGGGGGCAGAACGTCTGCCGGATGTGGAGCACGCAGGCAGGCCGTTTATGAAGTTCAGGCTGGTG TTGTGA
Upstream 100 bases:
>100_bases AAAACGGCCCGATTGCGCAAATGTGATTGGCAGCGTCCGTGCGGGGGCCGCTAAGGCGGGCAAAGCACTCGCGCTATGCA CAGTCAGGAAGATCTTCGCC
Downstream 100 bases:
>100_bases CTATTTGAAGGGAATTTTTGAGGCGCACATATCGGGCCGATCGTGGGTGTAAGATTGGAAGACGTTTCTGGTGAAACGCT CGACTTTTGCGAAGTCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MRQPHRPVIRFVRLSEIDPQEITAHMSDPLMAEHMPLLEGVEWNAAQTEQFVAAKEACWARDGLGHWGILSDDAYIGWGG FQKEDEEWDFGLVLRHSAFGRGIQVAKAALAVAAQDTRIPFVTFLLPPSRRHLGALRRLGAERLPDVEHAGRPFMKFRLV L
Sequences:
>Translated_161_residues MRQPHRPVIRFVRLSEIDPQEITAHMSDPLMAEHMPLLEGVEWNAAQTEQFVAAKEACWARDGLGHWGILSDDAYIGWGG FQKEDEEWDFGLVLRHSAFGRGIQVAKAALAVAAQDTRIPFVTFLLPPSRRHLGALRRLGAERLPDVEHAGRPFMKFRLV L >Mature_161_residues MRQPHRPVIRFVRLSEIDPQEITAHMSDPLMAEHMPLLEGVEWNAAQTEQFVAAKEACWARDGLGHWGILSDDAYIGWGG FQKEDEEWDFGLVLRHSAFGRGIQVAKAALAVAAQDTRIPFVTFLLPPSRRHLGALRRLGAERLPDVEHAGRPFMKFRLV L
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18218; Mature: 18218
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQPHRPVIRFVRLSEIDPQEITAHMSDPLMAEHMPLLEGVEWNAAQTEQFVAAKEACWA CCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHH RDGLGHWGILSDDAYIGWGGFQKEDEEWDFGLVLRHSAFGRGIQVAKAALAVAAQDTRIP HCCCCCCCEECCCCEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCC FVTFLLPPSRRHLGALRRLGAERLPDVEHAGRPFMKFRLVL EEEEEECCCHHHHHHHHHHHHHCCCCHHHCCCCCEEEEECC >Mature Secondary Structure MRQPHRPVIRFVRLSEIDPQEITAHMSDPLMAEHMPLLEGVEWNAAQTEQFVAAKEACWA CCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHH RDGLGHWGILSDDAYIGWGGFQKEDEEWDFGLVLRHSAFGRGIQVAKAALAVAAQDTRIP HCCCCCCCEECCCCEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCC FVTFLLPPSRRHLGALRRLGAERLPDVEHAGRPFMKFRLVL EEEEEECCCHHHHHHHHHHHHHCCCCHHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA