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The map label for this gene is bepC [H]

Identifier: 99081831

GI number: 99081831

Start: 2096154

End: 2097575

Strand: Reverse

Name: bepC [H]

Synonym: TM1040_1991

Alternate gene names: 99081831

Gene position: 2097575-2096154 (Counterclockwise)

Preceding gene: 99081832

Following gene: 99081830

Centisome position: 65.53

GC content: 63.29

Gene sequence:

>1422_bases
ATGCAAAAACTATTGAAATCAAAGCGTATTAAGGCTTTTGCGACAATCGGCGTCCTCGCCACGGCCGTCTTGAGCGCCCC
GCAGGCGCGTGCGGATAATGTCACCGACGCGATGATCGGCGCCTATACAAGCAGCGGCCTTCTGGAACAGAACCGAGCCC
TGCTGCGTGCCGCAGACGAAGGGGTTGCGGCCACGGTTGCGCGGCTGCGTCCGGTGATTACAGCCACCCTCGCGATTGCA
CGCGATTACAACCGCACGGGCTTTGGGACTGGGGGCGCGCGCTCCAGCCACAGCACGGGTGCCTCCTTGCGCCTCGGCAT
GGAGTGGTTGCTCTTTGACAATGGTGCCACGCAGCTCGATCAGGCAGCGGCGCAGGAAACCGTCCTTGCAACCCGGCAGA
CCCTTCTGGACGTGGAGCAGCAGGTGCTGTTCGCGGCTGTGCAGGCTTATGTCAACGTCCTGACTCAGCAGGATATCGTT
GCGCTGCGTCAGAACAACCTGCGCTTGCTGCAGGAAGAGCTGCGCGCTGCCAACGACCGTTTCGAAGTGGGCGAAGTGAC
GCGCACCGATGTCGCTCTGGCCGAAAGCCGGGTGGCTGAGGCACGTGCCAACCTGACCGATGCACGCGGTGCCTTGCTGA
CCGCACGCGCCACCTATGAAGAGGTGGTCGGACGCGCGCCGGGGGCGGTGGCGTCCTATCCGCCGTTGCCGCGCCGCGCG
GCATCGCTTTCGGATGCACAGGCGCTGGCGTTGCGCAGCCATCCGAGCCTGCGTGCGCAGCAGCATTCGGTGCGGGCGGC
GCAGCTTACCGCCGACAGCTCTTTGCGCGACATGGGCCCCAATGTGAAATTCACCGCCAGTGCGACTCATAGCGAGGTGC
ACAGCAGCGACTCCAATGCTGACAACTTTGATCTCGGCCTTTCGCTCAACCAGACCCTTTATGCGGGTGGCGCTCTGGCT
GCCGCGCGCCGGGCGGATCTGGCACGCCTCGATGCAGAGCGCGGCGCTTTGATTTCGATTCAGCGCAGCATCTCCAGCAG
CGCAGCAAGTGCCTATACCGCGTTTGAAACCGCCGCCGCGAGCCTTGTGTCCTCGAACCAGCGCGTGCGCGCAGCGCAGG
TCGCTTTTGACGGGATCCGCGAGGAAGCCACGCTGGGATCGCGCACCACGCTTGATGTGCTTCAGGCCGAGCAGGAGCTT
CTGGATGCACAAACGGCCCGTTTGTCGGCGCGTGCCAATCAGGCGCTGGCGGCTTATCAGCTGTTGCAGGCGCAGGGTTT
GTTGACGGCTGAGAACCTCAATCTCGCGGTCGAGCGATATGACCCCGAACTCTATCACAACCAGGTGCGTTCGGCTCCGG
CCTTTGTCACCAAGCGTGGGCAGGATCTGGACCGCGTGCTCAAGGCTCTGAGAAAAAACTGA

Upstream 100 bases:

>100_bases
AAGGCAGGCTCTTTTCAAATTGGTGTGACGTTCACATATGTGTGACGCAAACGAGATTGATAACAGGGCGCAAAGCTCTT
CCGGACATCGAGGCGACAGG

Downstream 100 bases:

>100_bases
GATTCTGACGTTGCTGTTGTGTGATGCGGGCAAGCTGGCTACACTTGCCCGCAAGAGGTGAGCTTGGCCCATAAATATGT
CTGATCCCGTTACCCATTCA

Product: Type I secretion outer membrane protein, TolC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MQKLLKSKRIKAFATIGVLATAVLSAPQARADNVTDAMIGAYTSSGLLEQNRALLRAADEGVAATVARLRPVITATLAIA
RDYNRTGFGTGGARSSHSTGASLRLGMEWLLFDNGATQLDQAAAQETVLATRQTLLDVEQQVLFAAVQAYVNVLTQQDIV
ALRQNNLRLLQEELRAANDRFEVGEVTRTDVALAESRVAEARANLTDARGALLTARATYEEVVGRAPGAVASYPPLPRRA
ASLSDAQALALRSHPSLRAQQHSVRAAQLTADSSLRDMGPNVKFTASATHSEVHSSDSNADNFDLGLSLNQTLYAGGALA
AARRADLARLDAERGALISIQRSISSSAASAYTAFETAAASLVSSNQRVRAAQVAFDGIREEATLGSRTTLDVLQAEQEL
LDAQTARLSARANQALAAYQLLQAQGLLTAENLNLAVERYDPELYHNQVRSAPAFVTKRGQDLDRVLKALRKN

Sequences:

>Translated_473_residues
MQKLLKSKRIKAFATIGVLATAVLSAPQARADNVTDAMIGAYTSSGLLEQNRALLRAADEGVAATVARLRPVITATLAIA
RDYNRTGFGTGGARSSHSTGASLRLGMEWLLFDNGATQLDQAAAQETVLATRQTLLDVEQQVLFAAVQAYVNVLTQQDIV
ALRQNNLRLLQEELRAANDRFEVGEVTRTDVALAESRVAEARANLTDARGALLTARATYEEVVGRAPGAVASYPPLPRRA
ASLSDAQALALRSHPSLRAQQHSVRAAQLTADSSLRDMGPNVKFTASATHSEVHSSDSNADNFDLGLSLNQTLYAGGALA
AARRADLARLDAERGALISIQRSISSSAASAYTAFETAAASLVSSNQRVRAAQVAFDGIREEATLGSRTTLDVLQAEQEL
LDAQTARLSARANQALAAYQLLQAQGLLTAENLNLAVERYDPELYHNQVRSAPAFVTKRGQDLDRVLKALRKN
>Mature_473_residues
MQKLLKSKRIKAFATIGVLATAVLSAPQARADNVTDAMIGAYTSSGLLEQNRALLRAADEGVAATVARLRPVITATLAIA
RDYNRTGFGTGGARSSHSTGASLRLGMEWLLFDNGATQLDQAAAQETVLATRQTLLDVEQQVLFAAVQAYVNVLTQQDIV
ALRQNNLRLLQEELRAANDRFEVGEVTRTDVALAESRVAEARANLTDARGALLTARATYEEVVGRAPGAVASYPPLPRRA
ASLSDAQALALRSHPSLRAQQHSVRAAQLTADSSLRDMGPNVKFTASATHSEVHSSDSNADNFDLGLSLNQTLYAGGALA
AARRADLARLDAERGALISIQRSISSSAASAYTAFETAAASLVSSNQRVRAAQVAFDGIREEATLGSRTTLDVLQAEQEL
LDAQTARLSARANQALAAYQLLQAQGLLTAENLNLAVERYDPELYHNQVRSAPAFVTKRGQDLDRVLKALRKN

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=386, Percent_Identity=24.3523316062176, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 50554; Mature: 50554

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKLLKSKRIKAFATIGVLATAVLSAPQARADNVTDAMIGAYTSSGLLEQNRALLRAADE
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCC
GVAATVARLRPVITATLAIARDYNRTGFGTGGARSSHSTGASLRLGMEWLLFDNGATQLD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECEEEEEECCCCHHHH
QAAAQETVLATRQTLLDVEQQVLFAAVQAYVNVLTQQDIVALRQNNLRLLQEELRAANDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
FEVGEVTRTDVALAESRVAEARANLTDARGALLTARATYEEVVGRAPGAVASYPPLPRRA
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCHHH
ASLSDAQALALRSHPSLRAQQHSVRAAQLTADSSLRDMGPNVKFTASATHSEVHSSDSNA
HCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCHHHHHCCCCCC
DNFDLGLSLNQTLYAGGALAAARRADLARLDAERGALISIQRSISSSAASAYTAFETAAA
CCEEECCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHH
SLVSSNQRVRAAQVAFDGIREEATLGSRTTLDVLQAEQELLDAQTARLSARANQALAAYQ
HHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLQAQGLLTAENLNLAVERYDPELYHNQVRSAPAFVTKRGQDLDRVLKALRKN
HHHHCCCEEECCCCEEEECCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MQKLLKSKRIKAFATIGVLATAVLSAPQARADNVTDAMIGAYTSSGLLEQNRALLRAADE
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCC
GVAATVARLRPVITATLAIARDYNRTGFGTGGARSSHSTGASLRLGMEWLLFDNGATQLD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECEEEEEECCCCHHHH
QAAAQETVLATRQTLLDVEQQVLFAAVQAYVNVLTQQDIVALRQNNLRLLQEELRAANDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
FEVGEVTRTDVALAESRVAEARANLTDARGALLTARATYEEVVGRAPGAVASYPPLPRRA
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCHHH
ASLSDAQALALRSHPSLRAQQHSVRAAQLTADSSLRDMGPNVKFTASATHSEVHSSDSNA
HCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCHHHHHCCCCCC
DNFDLGLSLNQTLYAGGALAAARRADLARLDAERGALISIQRSISSSAASAYTAFETAAA
CCEEECCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHH
SLVSSNQRVRAAQVAFDGIREEATLGSRTTLDVLQAEQELLDAQTARLSARANQALAAYQ
HHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLQAQGLLTAENLNLAVERYDPELYHNQVRSAPAFVTKRGQDLDRVLKALRKN
HHHHCCCEEECCCCEEEECCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]