| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is hisC [H]
Identifier: 99081821
GI number: 99081821
Start: 2084941
End: 2086053
Strand: Direct
Name: hisC [H]
Synonym: TM1040_1981
Alternate gene names: 99081821
Gene position: 2084941-2086053 (Clockwise)
Preceding gene: 99081818
Following gene: 99081822
Centisome position: 65.14
GC content: 63.61
Gene sequence:
>1113_bases ATGACAGACAGCCGCCAAACCCCGCTCGCCCAATCCCTGCCCGCTTCGGTGCCCTTTGTTGGCCCCGAGACCCATGAACG CCAGCGCGGCGCGCCTTTTGTGGCGCGGCTCGGTGCAAATGAGAACCTCTTTGGCGTCTCCCCCAAGGCGATTGCCGCCA TGCAGGCCTCAGCGGCAGAGATCTGGAAATACGGCGATGCAGAGAGCTACGAGCTGCGCGCGGCCCTCTCGGCGTTGCAT GGCATTGCACCCGAACACATCATGGTTGGCGAGGGCATCGACGGCCTCCTGGGCAATCTGGTGCGGCTTTATGTCGGCGC CGGCGATGCTGTGGTGACATCGCTGGGGGCCTATCCGACCTTCAACTATCATGTGGCCGGTTTTGGCGGCGACCTTCACA CTGTGCCCTACAAGGACGACCACGAAGACATCAAAGCCCTGATGGCCAAGGCACATGAGGTGGGCGCAAAGCTGGTCTAT CTCGCCAATCCTGACAATCCGATGGGCAGTTGGCATCGCGGTGCAGATATTGTCGCCGCACTTGACGACCTGCCCGAAGG CAGCCTCTTGGTGCTGGATGAGGCCTATGTGGAATGCGCGCCCAAAGGCACCGCCGCCCCGGTCGATGTGACCGACCCGC GCGTGATCCGCATGCGCACCCTCTCCAAGGCCTATGGCATGGCGGGGGCACGCGTCGGCTATGCCATGGGGGCGGTTGAA GTCATCTCCGCCTTTCACAAGGTCCGCAATCACTTTGGCATGAACCGCTGCGCACAGATCGGCGCAACCGAGGCCATCAA GGATCAGGCATGGCTGGCTCATGTGCAGGCCGAGATCGCCACCGCACGCGAAGAGATCTCGCGCATCGCTCGCGAAAACG GCCTCACACCGCTGCCTTCCGCGACCAACTTCGTCGCCATAGACTGCGGTCGCGATGGCGCCTTTGCCAAGGCGGTCTTG GAGGCGCTGGTGGCGCGGGACATCTTTGTGCGCATGCCATTTGCAGCCCCGCAAAACCGCTGCATCCGCGTCAGCTGCGG CCCCGAAAGAGAGCGCCGCGCCTTTGCCGAGGCCCTGCCGCTGGCCCTCAAAGACGCGCAGAACGGCGCCTAA
Upstream 100 bases:
>100_bases TGACGCGAGGGCACGCCGGACCGGATCCTTCCCGGACCGCGACCTGATCTCGCCCGATCTGCCCTTGCCCGCCTGCGCGC GCGCCGCTAGGTCTTGGGCC
Downstream 100 bases:
>100_bases AGCGCAAGGCAAACGGTAAATCCTGCCAAAAGAGACCCTGTTTTACCGCCGGTTTACCCCTTTCAGGCTAGGCTGTTTCA ACATTGCCTGCCTGGAGGGG
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase [H]
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MTDSRQTPLAQSLPASVPFVGPETHERQRGAPFVARLGANENLFGVSPKAIAAMQASAAEIWKYGDAESYELRAALSALH GIAPEHIMVGEGIDGLLGNLVRLYVGAGDAVVTSLGAYPTFNYHVAGFGGDLHTVPYKDDHEDIKALMAKAHEVGAKLVY LANPDNPMGSWHRGADIVAALDDLPEGSLLVLDEAYVECAPKGTAAPVDVTDPRVIRMRTLSKAYGMAGARVGYAMGAVE VISAFHKVRNHFGMNRCAQIGATEAIKDQAWLAHVQAEIATAREEISRIARENGLTPLPSATNFVAIDCGRDGAFAKAVL EALVARDIFVRMPFAAPQNRCIRVSCGPERERRAFAEALPLALKDAQNGA
Sequences:
>Translated_370_residues MTDSRQTPLAQSLPASVPFVGPETHERQRGAPFVARLGANENLFGVSPKAIAAMQASAAEIWKYGDAESYELRAALSALH GIAPEHIMVGEGIDGLLGNLVRLYVGAGDAVVTSLGAYPTFNYHVAGFGGDLHTVPYKDDHEDIKALMAKAHEVGAKLVY LANPDNPMGSWHRGADIVAALDDLPEGSLLVLDEAYVECAPKGTAAPVDVTDPRVIRMRTLSKAYGMAGARVGYAMGAVE VISAFHKVRNHFGMNRCAQIGATEAIKDQAWLAHVQAEIATAREEISRIARENGLTPLPSATNFVAIDCGRDGAFAKAVL EALVARDIFVRMPFAAPQNRCIRVSCGPERERRAFAEALPLALKDAQNGA >Mature_369_residues TDSRQTPLAQSLPASVPFVGPETHERQRGAPFVARLGANENLFGVSPKAIAAMQASAAEIWKYGDAESYELRAALSALHG IAPEHIMVGEGIDGLLGNLVRLYVGAGDAVVTSLGAYPTFNYHVAGFGGDLHTVPYKDDHEDIKALMAKAHEVGAKLVYL ANPDNPMGSWHRGADIVAALDDLPEGSLLVLDEAYVECAPKGTAAPVDVTDPRVIRMRTLSKAYGMAGARVGYAMGAVEV ISAFHKVRNHFGMNRCAQIGATEAIKDQAWLAHVQAEIATAREEISRIARENGLTPLPSATNFVAIDCGRDGAFAKAVLE ALVARDIFVRMPFAAPQNRCIRVSCGPERERRAFAEALPLALKDAQNGA
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=334, Percent_Identity=26.0479041916168, Blast_Score=96, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6322075, Length=365, Percent_Identity=24.1095890410959, Blast_Score=78, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001176 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 39477; Mature: 39346
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSRQTPLAQSLPASVPFVGPETHERQRGAPFVARLGANENLFGVSPKAIAAMQASAAE CCCCCCCCCHHHCCCCCCCCCCCCHHHHCCCCEEEEECCCCCEECCCHHHHHHHHHHHHH IWKYGDAESYELRAALSALHGIAPEHIMVGEGIDGLLGNLVRLYVGAGDAVVTSLGAYPT HHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCHHHHHHHCCCCC FNYHVAGFGGDLHTVPYKDDHEDIKALMAKAHEVGAKLVYLANPDNPMGSWHRGADIVAA CCEEEEEECCCEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHH LDDLPEGSLLVLDEAYVECAPKGTAAPVDVTDPRVIRMRTLSKAYGMAGARVGYAMGAVE HHCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHH VISAFHKVRNHFGMNRCAQIGATEAIKDQAWLAHVQAEIATAREEISRIARENGLTPLPS HHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ATNFVAIDCGRDGAFAKAVLEALVARDIFVRMPFAAPQNRCIRVSCGPERERRAFAEALP CCCEEEEECCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEECCCCHHHHHHHHHHH LALKDAQNGA HHHHCCCCCC >Mature Secondary Structure TDSRQTPLAQSLPASVPFVGPETHERQRGAPFVARLGANENLFGVSPKAIAAMQASAAE CCCCCCCCHHHCCCCCCCCCCCCHHHHCCCCEEEEECCCCCEECCCHHHHHHHHHHHHH IWKYGDAESYELRAALSALHGIAPEHIMVGEGIDGLLGNLVRLYVGAGDAVVTSLGAYPT HHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCHHHHHHHCCCCC FNYHVAGFGGDLHTVPYKDDHEDIKALMAKAHEVGAKLVYLANPDNPMGSWHRGADIVAA CCEEEEEECCCEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHH LDDLPEGSLLVLDEAYVECAPKGTAAPVDVTDPRVIRMRTLSKAYGMAGARVGYAMGAVE HHCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHH VISAFHKVRNHFGMNRCAQIGATEAIKDQAWLAHVQAEIATAREEISRIARENGLTPLPS HHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ATNFVAIDCGRDGAFAKAVLEALVARDIFVRMPFAAPQNRCIRVSCGPERERRAFAEALP CCCEEEEECCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEECCCCHHHHHHHHHHH LALKDAQNGA HHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA