| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is nthA [H]
Identifier: 99081812
GI number: 99081812
Start: 2076213
End: 2076839
Strand: Reverse
Name: nthA [H]
Synonym: TM1040_1972
Alternate gene names: 99081812
Gene position: 2076839-2076213 (Counterclockwise)
Preceding gene: 99081817
Following gene: 99081811
Centisome position: 64.88
GC content: 63.0
Gene sequence:
>627_bases ATGCCTCATGATCATCACGACCACCCGCACAGTCTTCTTCCTTCTGAACCTGCCCTGCGCGTCAAAGCGCTGGAGACGAT TCTGACCCGCAAAGGGCTCATTGACCCGGCCGCGCTGGACGCGATCATCGACACCTACGAAAACAAGGTTGGACCCCAAA ATGGCGCGCGTGTTGTGGCGCGGGCCTGGTCGGACCCTGCGTTTCGCGCCGCATTGCTCGAGGATGCGGACAAGATCCTC GATGAGATGGCGCTGAACGGGCGGCAGGGGGAACATGTTGTGGTGGTGGAGAACACACCCGAGCGGCACAACATGGTCGT ATGCACCCTGTGCAGCTGCTATCCATGGCCACTCTTGGGCATTCCGCCGGGCTGGTACAAATCCGATGCCTATCGCGCCC GCGCCGTGCGCGAGCCCCGCAAGGTGCTGGCGGAATTTGGCGTCACCCTGCCGGCGGACACATCGGTCAGAGTGTGGGAT TCCACAGCCGAGGTGCGCTATCTGGTGCTGCCCATGCGTCCCGAAGGCACCGACGGCTGGAGCGAAGAGGCGTTGATGAC CCTGGTCAACCGCGATTCGATGATCGGAACCGCCCTTGCCACCCCAGCGAGCGAGGCCCCTGCATGA
Upstream 100 bases:
>100_bases TTGCCCTGAGGAGCGGAAAACCTCGCGCCAACAGGATTTGATTGTATGCATCACGATTTGCAACTGGACAGGGGCACGCC CCTGCGGCCAGCATCTGCGC
Downstream 100 bases:
>100_bases GCCGAATTCACGATATGGGGGGGCGCTATGGCGATGGTCCGATCACGCCCGAGCCCCTGGACGCGCCGGTCTTTCCCGAG GACTGGCACGGCCGCGCGCT
Product: nitrile hydratase, alpha subunit
Products: NA
Alternate protein names: NHase; Nitrilase [H]
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MPHDHHDHPHSLLPSEPALRVKALETILTRKGLIDPAALDAIIDTYENKVGPQNGARVVARAWSDPAFRAALLEDADKIL DEMALNGRQGEHVVVVENTPERHNMVVCTLCSCYPWPLLGIPPGWYKSDAYRARAVREPRKVLAEFGVTLPADTSVRVWD STAEVRYLVLPMRPEGTDGWSEEALMTLVNRDSMIGTALATPASEAPA
Sequences:
>Translated_208_residues MPHDHHDHPHSLLPSEPALRVKALETILTRKGLIDPAALDAIIDTYENKVGPQNGARVVARAWSDPAFRAALLEDADKIL DEMALNGRQGEHVVVVENTPERHNMVVCTLCSCYPWPLLGIPPGWYKSDAYRARAVREPRKVLAEFGVTLPADTSVRVWD STAEVRYLVLPMRPEGTDGWSEEALMTLVNRDSMIGTALATPASEAPA >Mature_207_residues PHDHHDHPHSLLPSEPALRVKALETILTRKGLIDPAALDAIIDTYENKVGPQNGARVVARAWSDPAFRAALLEDADKILD EMALNGRQGEHVVVVENTPERHNMVVCTLCSCYPWPLLGIPPGWYKSDAYRARAVREPRKVLAEFGVTLPADTSVRVWDS TAEVRYLVLPMRPEGTDGWSEEALMTLVNRDSMIGTALATPASEAPA
Specific function: NHase catalyzes the hydration of various nitrile compounds to the corresponding amides. Industrial production of acrylamide is now being developed using some of the enzymes of this class [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitrile hydratase subunit alpha family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004232 - InterPro: IPR018141 - ProDom: PD007559 [H]
Pfam domain/function: PF02979 NHase_alpha [H]
EC number: =4.2.1.84 [H]
Molecular weight: Translated: 22906; Mature: 22775
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHDHHDHPHSLLPSEPALRVKALETILTRKGLIDPAALDAIIDTYENKVGPQNGARVVA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEE RAWSDPAFRAALLEDADKILDEMALNGRQGEHVVVVENTPERHNMVVCTLCSCYPWPLLG ECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHCEEEEEECCCCCCCCCC IPPGWYKSDAYRARAVREPRKVLAEFGVTLPADTSVRVWDSTAEVRYLVLPMRPEGTDGW CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCC SEEALMTLVNRDSMIGTALATPASEAPA HHHHHHHHHHCCCHHHHHHCCCCCCCCC >Mature Secondary Structure PHDHHDHPHSLLPSEPALRVKALETILTRKGLIDPAALDAIIDTYENKVGPQNGARVVA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEE RAWSDPAFRAALLEDADKILDEMALNGRQGEHVVVVENTPERHNMVVCTLCSCYPWPLLG ECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHCEEEEEECCCCCCCCCC IPPGWYKSDAYRARAVREPRKVLAEFGVTLPADTSVRVWDSTAEVRYLVLPMRPEGTDGW CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCC SEEALMTLVNRDSMIGTALATPASEAPA HHHHHHHHHHCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9154927 [H]