| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081810
Identifier: 99081810
GI number: 99081810
Start: 2075153
End: 2075515
Strand: Reverse
Name: 99081810
Synonym: TM1040_1970
Alternate gene names: NA
Gene position: 2075515-2075153 (Counterclockwise)
Preceding gene: 99081811
Following gene: 99081809
Centisome position: 64.84
GC content: 63.09
Gene sequence:
>363_bases ATGACGGTGCCCGAGACCAAGCTGAATACAGCTGATCAGATGCAGCGCCCCGAGCCCGCGTTCGAGGCCCCCTGGCACGC ACAGGCCTTTGCGCTGGCGGTCCATCTCAATGAAAGCGGGCGCTTTACCTGGCCCGAGTGGGTGGAGCGTTTTTCTGCCG CACTCAAAGAGGCCGGTCTGAGTCGCGAACTCAATGGCGGCGACGATTACTTTACCGTTTGGCTTGCCACGCTTGAGCGT CTGATGTCCGATCAGGGTCACACCGACCCTGCGGAGGTTGCCCGCGTGCGCGAGGACTGGGCAGAGGCCTATCTGTCCAC GCCACATGGTGCTCCGGTGCATCTGCCCGAAGGTCGCGGCTGA
Upstream 100 bases:
>100_bases CGGTGGCCTTTGCCGCGCGCGACCTCTGGCCGCAGGCAGAGCACCCCAATGATGAGGTGGTGTTGGATCTCTGGCAAAGC TATCTGGAGCCGGTTTCATC
Downstream 100 bases:
>100_bases CGCACAGATGGGACGTGGCCCCGACGGCGCTGACCGTAACGGGGGCGGCCCTCCCGTGATGCGTTCTCGTCTAGCGCTGA CAGCGAAGGGCGCGGCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MTVPETKLNTADQMQRPEPAFEAPWHAQAFALAVHLNESGRFTWPEWVERFSAALKEAGLSRELNGGDDYFTVWLATLER LMSDQGHTDPAEVARVREDWAEAYLSTPHGAPVHLPEGRG
Sequences:
>Translated_120_residues MTVPETKLNTADQMQRPEPAFEAPWHAQAFALAVHLNESGRFTWPEWVERFSAALKEAGLSRELNGGDDYFTVWLATLER LMSDQGHTDPAEVARVREDWAEAYLSTPHGAPVHLPEGRG >Mature_119_residues TVPETKLNTADQMQRPEPAFEAPWHAQAFALAVHLNESGRFTWPEWVERFSAALKEAGLSRELNGGDDYFTVWLATLERL MSDQGHTDPAEVARVREDWAEAYLSTPHGAPVHLPEGRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13471; Mature: 13340
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPETKLNTADQMQRPEPAFEAPWHAQAFALAVHLNESGRFTWPEWVERFSAALKEAGL CCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCC SRELNGGDDYFTVWLATLERLMSDQGHTDPAEVARVREDWAEAYLSTPHGAPVHLPEGRG CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TVPETKLNTADQMQRPEPAFEAPWHAQAFALAVHLNESGRFTWPEWVERFSAALKEAGL CCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCC SRELNGGDDYFTVWLATLERLMSDQGHTDPAEVARVREDWAEAYLSTPHGAPVHLPEGRG CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA