| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081799
Identifier: 99081799
GI number: 99081799
Start: 2063653
End: 2064093
Strand: Direct
Name: 99081799
Synonym: TM1040_1959
Alternate gene names: NA
Gene position: 2063653-2064093 (Clockwise)
Preceding gene: 99081794
Following gene: 99081801
Centisome position: 64.47
GC content: 58.5
Gene sequence:
>441_bases ATGCGCTCCCCCCTTGACCGTCTTCGTCACGCCCTGAGTTTCGAGATCATCGCCCTGTTGTTGATCGTCCCCCTTGGGGC CGCAGTGTTTCACTTTCCCCTGCACGCAATCGGGGCTGTCGGCATCGTCAGCGCCACGCTCGCGACCCTGTGGAACCTGA TCTACAACTGGGGCTTTGATGCGATTTTGCAGCACTGGCGGGGTAGCACGCTCAAGACACCGATGCTCCGGGTGCTGCAT GCGGTGCTCTTTGAAGGCGGGCTGCTCATCGTGCTGATGCCCTTCATCGCCTGGTATTTGCAGGTTTCGCTCTGGCAGGC CTTTGTGATGGATGTGGCCTTTGCGCTCTTTTACATGGTCTATGCGTTTGGGTTTAACTGGGCCTATGACCGCCTGTTTC CCCTGAAAGAATGGCAGGAGGACCACGCCGCGCAACACTAG
Upstream 100 bases:
>100_bases ATTGCGCCTCGCAGGGGACGACCCCGCCAATGGCTGCGCCGTGCAGGCGTGACCGTTGCCTCGTTATCGGGACGACCCGA CCACAGACATGAGGTCGCCT
Downstream 100 bases:
>100_bases GCTGCGGCGCCCCCACCAGAGCACACAGAGAGCCGCCCTAAACCTGGGGGCGGCGTATCTGCCTTCAGTCGTTCAAATCC GCAAAGAGATTGTCGGTCTC
Product: transmembrane pair
Products: NA
Alternate protein names: Transmembrane Pair Domain Protein; Transmembrane Pair; Transmembrane Pair Permease Of Facilitator Superfamily; Transmembrane Pair Family Protein; Bacterial Transmembrane Pair Family; Outer Membrane Protein; Transmembrane Pair Protein; Transmembrane Protein; Bacterial Transmembrane Pair Family Protein
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MRSPLDRLRHALSFEIIALLLIVPLGAAVFHFPLHAIGAVGIVSATLATLWNLIYNWGFDAILQHWRGSTLKTPMLRVLH AVLFEGGLLIVLMPFIAWYLQVSLWQAFVMDVAFALFYMVYAFGFNWAYDRLFPLKEWQEDHAAQH
Sequences:
>Translated_146_residues MRSPLDRLRHALSFEIIALLLIVPLGAAVFHFPLHAIGAVGIVSATLATLWNLIYNWGFDAILQHWRGSTLKTPMLRVLH AVLFEGGLLIVLMPFIAWYLQVSLWQAFVMDVAFALFYMVYAFGFNWAYDRLFPLKEWQEDHAAQH >Mature_146_residues MRSPLDRLRHALSFEIIALLLIVPLGAAVFHFPLHAIGAVGIVSATLATLWNLIYNWGFDAILQHWRGSTLKTPMLRVLH AVLFEGGLLIVLMPFIAWYLQVSLWQAFVMDVAFALFYMVYAFGFNWAYDRLFPLKEWQEDHAAQH
Specific function: Unknown
COG id: COG4125
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16771; Mature: 16771
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSPLDRLRHALSFEIIALLLIVPLGAAVFHFPLHAIGAVGIVSATLATLWNLIYNWGFD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AILQHWRGSTLKTPMLRVLHAVLFEGGLLIVLMPFIAWYLQVSLWQAFVMDVAFALFYMV HHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAFGFNWAYDRLFPLKEWQEDHAAQH HHHCCCHHHHHHCCHHHHHHHCCCCC >Mature Secondary Structure MRSPLDRLRHALSFEIIALLLIVPLGAAVFHFPLHAIGAVGIVSATLATLWNLIYNWGFD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AILQHWRGSTLKTPMLRVLHAVLFEGGLLIVLMPFIAWYLQVSLWQAFVMDVAFALFYMV HHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAFGFNWAYDRLFPLKEWQEDHAAQH HHHCCCHHHHHHCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA