| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is ispZ [H]
Identifier: 99081781
GI number: 99081781
Start: 2044201
End: 2044836
Strand: Reverse
Name: ispZ [H]
Synonym: TM1040_1940
Alternate gene names: 99081781
Gene position: 2044836-2044201 (Counterclockwise)
Preceding gene: 99081782
Following gene: 99081779
Centisome position: 63.88
GC content: 57.23
Gene sequence:
>636_bases ATGAGCGAACAGACAAGTGATCCAAGCCCGGCGGCGCGCAAGATAAGCCCCCTGGTCAAGAACTTATTGGAGTTCGGCCC GGTTGTTCTGTTCTTCGTGGCGTATCTGAGGCTCAAGGATCAGGTGTTTGAGATCGGCGGCACCTCCTATGAGGGGTTCA TCGTTGTGACCGCAGGCTTTGTACCGCTGATGATCCTCTCGACGCTGATCCTGTGGCGGCTTACGGGCAAACTCTCGCGC ATGCAGGTGATGACGCTGGTGCTGATTGTGGTCTTTGGCGGGCTCTCGGTCTGGTTCAACGACGAGCGCTTTTTCAAGAT GAAGCCGACGATGATCTACCTGCTCTTTGGCGGCATGCTGGGCGTGGGGCTTTTGCGCGGTCAGAGTTACCTGCGTGTGG TGATGGAAGAGATGATGCCGCTTCAGGACGAGGGGTGGATGATCCTCACACGTCGCCTCTGTGCGTTCTTCTTTGGGCTG GCGGTCGCCAATGAGGTGATCTGGCGCATGATGAGCACGGAAACCTGGGTCTATTTCAAGACCTTCGGTCTGACGGCTGC GATGTTCCTGTTCTTCATGACTCAGGCTCGGCTGTTCCAGATCTACGGGCTCGAGGAACAGGGCGAGGCCGAGTAG
Upstream 100 bases:
>100_bases TTGCGTTGATGGCGTTGATCGCTGCAGGTGCGGTGATTGTTGAAATGGGGGGCTGAGGGTGCCATCTGAGAGGGATGATT TGGGACAGGAGAGGCCAGCA
Downstream 100 bases:
>100_bases GCCACATCATCTGAGCGCGCGTCGCCCGAATCTATGCCTGAGAATTGACCGCCTCCGAGGGGGAGCGATGCGCATCGTGA CCGGGCGTCGCTGGTCGCCC
Product: intracellular septation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MSEQTSDPSPAARKISPLVKNLLEFGPVVLFFVAYLRLKDQVFEIGGTSYEGFIVVTAGFVPLMILSTLILWRLTGKLSR MQVMTLVLIVVFGGLSVWFNDERFFKMKPTMIYLLFGGMLGVGLLRGQSYLRVVMEEMMPLQDEGWMILTRRLCAFFFGL AVANEVIWRMMSTETWVYFKTFGLTAAMFLFFMTQARLFQIYGLEEQGEAE
Sequences:
>Translated_211_residues MSEQTSDPSPAARKISPLVKNLLEFGPVVLFFVAYLRLKDQVFEIGGTSYEGFIVVTAGFVPLMILSTLILWRLTGKLSR MQVMTLVLIVVFGGLSVWFNDERFFKMKPTMIYLLFGGMLGVGLLRGQSYLRVVMEEMMPLQDEGWMILTRRLCAFFFGL AVANEVIWRMMSTETWVYFKTFGLTAAMFLFFMTQARLFQIYGLEEQGEAE >Mature_210_residues SEQTSDPSPAARKISPLVKNLLEFGPVVLFFVAYLRLKDQVFEIGGTSYEGFIVVTAGFVPLMILSTLILWRLTGKLSRM QVMTLVLIVVFGGLSVWFNDERFFKMKPTMIYLLFGGMLGVGLLRGQSYLRVVMEEMMPLQDEGWMILTRRLCAFFFGLA VANEVIWRMMSTETWVYFKTFGLTAAMFLFFMTQARLFQIYGLEEQGEAE
Specific function: Involved in cell division; probably involved in intracellular septation [H]
COG id: COG2917
COG function: function code D; Intracellular septation protein A
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispZ family [H]
Homologues:
Organism=Escherichia coli, GI1787507, Length=173, Percent_Identity=32.9479768786127, Blast_Score=73, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006008 [H]
Pfam domain/function: PF04279 IspA [H]
EC number: NA
Molecular weight: Translated: 24164; Mature: 24033
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 6.7 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQTSDPSPAARKISPLVKNLLEFGPVVLFFVAYLRLKDQVFEIGGTSYEGFIVVTAGF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHH VPLMILSTLILWRLTGKLSRMQVMTLVLIVVFGGLSVWFNDERFFKMKPTMIYLLFGGML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEECHHHHHHHHHHHH GVGLLRGQSYLRVVMEEMMPLQDEGWMILTRRLCAFFFGLAVANEVIWRMMSTETWVYFK HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHH TFGLTAAMFLFFMTQARLFQIYGLEEQGEAE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SEQTSDPSPAARKISPLVKNLLEFGPVVLFFVAYLRLKDQVFEIGGTSYEGFIVVTAGF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHH VPLMILSTLILWRLTGKLSRMQVMTLVLIVVFGGLSVWFNDERFFKMKPTMIYLLFGGML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEECHHHHHHHHHHHH GVGLLRGQSYLRVVMEEMMPLQDEGWMILTRRLCAFFFGLAVANEVIWRMMSTETWVYFK HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHH TFGLTAAMFLFFMTQARLFQIYGLEEQGEAE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]