| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is ptsP [H]
Identifier: 99081774
GI number: 99081774
Start: 2033657
End: 2035897
Strand: Reverse
Name: ptsP [H]
Synonym: TM1040_1933
Alternate gene names: 99081774
Gene position: 2035897-2033657 (Counterclockwise)
Preceding gene: 99081775
Following gene: 99081773
Centisome position: 63.6
GC content: 59.3
Gene sequence:
>2241_bases ATGGTTGAGAACACGGAATCCGAAAGCCGCAAGCTTCTGGGTCGTCTGCGCGAGGCCATGGCAGGGGATGACGCCGGACA GGCGCGCCTCGACAAGATTACGCAGCTGATAGCCGACAGTATGGGCACCGAAGTGTGCTCTATCTATCTGTTTCGCGACG AAGATACGCTCGAACTCTGCGCCACCGAAGGGCTCAACCGCGAGTCCGTGCACCAGACCCGCATGCGCGTGGGCGAGGGG CTTGTGGGGCGTGTGGCGCGCACGGGCAAGGTGATCAACACCCCCGATGCGCCAAGCGCGCGGGGCTTTCGCTATATGCC GGAAACCGGCGAGGAGCGCTTCTCCTCATTCCTGGGTATCCCCATCCAGCGCCTTGGCGAGATGATGGGCGTTCTTGTGG TGCAATCCAAGGAAAGCCGCGAATATTCCGCGGACGCGGTCTATGCCCTTGAAGTTGTTGCAATGGTTATCGCCGAGATG ACCGAACTTGGGGCCTTTGTGGGCGAGGGCTCTGCCATGTCGCCCCTGCACCAGCAATCTGTGCTCTTGAAGGGTATCGC CGCGCAGGAGGGGGCCGCCGAGGGCAATATCTGGCTGCATGAGCCCCGCGTTGTGGTGACGAACCCGATTGCGGACGATC CGCATCGGGAGCTGGAGCGCCTGCAGGAGGCCGTTGAGGAGCTGCGGGTGGGTGTCGACAAGATGCTGCAGGTCTCATCG AACGGTGACAAGGAACAGGCACAGGTCCTTGAAACTTATCGCATGTTTGCCAACTCCAAAGGCTGGATGCGGCGCATGGA AGAGGACATTGCCCGTGGCCTGAGCGCCGAAGCTGCAGTTGAAAAAGAACAATCCCTTGCAAGAGGCCGCATGGCGCAGG TTCAGGACGCGTATTTGCGTGAGCGCCTGAGCGATCTGGACGATCTGTCGAACCGCCTGCTGCGTATTTTGACCGGTCAG GGCAAGGATACCGGCGCAGAACTGCCGGAAAATCCCATCCTGGTCGCGCGCAATATCGGTCCGGCCGAATTGTTGGAATA TGGTAGGTCTTTGAAGGGAATTATCCTTGAAGAGGGCTCTGTAGGTTCGCATGCGGCAATTGTAGCGCGGGCATTGGCGA TCCCATTGGTGGTGCGTGTGGCCCGGATCACTACCGAAGGGCTGAATGGGGATCATGTTTTGGTGGACGGGGACAACGCT GTTGTGCACCTGCGCCCCGATGATCCTGTCGTCAGCGCCTTTCGCGATAAGATTGCGATGCAAGCGAAGGCCCAGGAACG GTATTCGTCGATACGTGAGAAACCTGCGATAACGGTCGATGGAAAAAGAATTAACCTGATGATGAACGCAGGGTTGATGG CAGATCTGCCTTCGCTCGAGAATTCTGGCGCAGAGGGGGTTGGTCTGTTTCGCACTGAGCTGCAGTTCCTGGTGCGCAAT CAGATGCCCAAACGCTCCGAGCTCAAGGGGCTCTACCAGCGTGTGCTGGAGGCTGCAGGTGGCAAACGGGTGGTGTTTCG CACCCTCGACATCGGGTCCGACAAGGTTCTGCCCTATATGAAGCCCACCGACGAGCCGAACCCAGCCTTGGGATGGCGCG CAATTCGGGTTGGATTGGACAAACCCGGTGTGATGCGGATGCAGCTACAGGCGCTGATCCGCGCGGCCAACGGCGGGCCT CTTACGGTGATGTTCCCATTTGTGGCACAATTCGAGGAATACCGCCTCGCGCGCGAGGAGGTGAACAAGACCATCGAACG CGAGCGCCGTTTGGGACATGTTCTGCCCTCCACGCTCGAGATCGGCGCCATGCTGGAGACCCCATCGCTTGGGTTTGCAC CGCTCAAGTTCTTTGAGGAAGTCGATTTTCTGTCGATTGGCGGCAATGATCTCAAGCAGTTCTTCTTTGCGGCGGACCGT GAAAACGAACGGGTGCGACGGCGCTATGACACGCTCAACGTGAGCTTCCTGAGCTTTATCGAGCGGATCGTGGAACGCTG CGACATCTCCGGCACGCCGCTGAGCTTTTGTGGTGAGGATGCCGGCCGCCCGATCGAAGCCGTGTGTCTTGCAGCCATGG GAATTCGCACCCTTTCGATGCGTCCGGCCTCGATCGGCCCGGTCAAATCTCTGCTGATGCGCGTGGATCTTGGGGAACTG CGCAAGATCATCTCTGATGCGCGTCATCGCGGTGATCAAACGGTGCGACCGGCGGTCATGCAGTACCTCCGCGAACTTTG A
Upstream 100 bases:
>100_bases ATGCGCATAAGCGTCATCTGCTATTCAGAACGCCGGACCGCGAGCGGGTGAGAAACAGGGCATCCGCAGTGTCGAAGAAG AAACCCGGGAAAGGGCCCAC
Downstream 100 bases:
>100_bases TCCATTGGCCGCCATCCTGCCCCGGCCTGTGGACGGCGGTTATGTCTTCTTAAGGAAAATGTGGTTGTACCTTTGCCTCG AAGAGGCGGGTATTTTGCGG
Product: phosphoenolpyruvate-protein phosphotransferase PtsP
Products: NA
Alternate protein names: Enzyme I-Ntr; Phosphotransferase system, enzyme I [H]
Number of amino acids: Translated: 746; Mature: 746
Protein sequence:
>746_residues MVENTESESRKLLGRLREAMAGDDAGQARLDKITQLIADSMGTEVCSIYLFRDEDTLELCATEGLNRESVHQTRMRVGEG LVGRVARTGKVINTPDAPSARGFRYMPETGEERFSSFLGIPIQRLGEMMGVLVVQSKESREYSADAVYALEVVAMVIAEM TELGAFVGEGSAMSPLHQQSVLLKGIAAQEGAAEGNIWLHEPRVVVTNPIADDPHRELERLQEAVEELRVGVDKMLQVSS NGDKEQAQVLETYRMFANSKGWMRRMEEDIARGLSAEAAVEKEQSLARGRMAQVQDAYLRERLSDLDDLSNRLLRILTGQ GKDTGAELPENPILVARNIGPAELLEYGRSLKGIILEEGSVGSHAAIVARALAIPLVVRVARITTEGLNGDHVLVDGDNA VVHLRPDDPVVSAFRDKIAMQAKAQERYSSIREKPAITVDGKRINLMMNAGLMADLPSLENSGAEGVGLFRTELQFLVRN QMPKRSELKGLYQRVLEAAGGKRVVFRTLDIGSDKVLPYMKPTDEPNPALGWRAIRVGLDKPGVMRMQLQALIRAANGGP LTVMFPFVAQFEEYRLAREEVNKTIERERRLGHVLPSTLEIGAMLETPSLGFAPLKFFEEVDFLSIGGNDLKQFFFAADR ENERVRRRYDTLNVSFLSFIERIVERCDISGTPLSFCGEDAGRPIEAVCLAAMGIRTLSMRPASIGPVKSLLMRVDLGEL RKIISDARHRGDQTVRPAVMQYLREL
Sequences:
>Translated_746_residues MVENTESESRKLLGRLREAMAGDDAGQARLDKITQLIADSMGTEVCSIYLFRDEDTLELCATEGLNRESVHQTRMRVGEG LVGRVARTGKVINTPDAPSARGFRYMPETGEERFSSFLGIPIQRLGEMMGVLVVQSKESREYSADAVYALEVVAMVIAEM TELGAFVGEGSAMSPLHQQSVLLKGIAAQEGAAEGNIWLHEPRVVVTNPIADDPHRELERLQEAVEELRVGVDKMLQVSS NGDKEQAQVLETYRMFANSKGWMRRMEEDIARGLSAEAAVEKEQSLARGRMAQVQDAYLRERLSDLDDLSNRLLRILTGQ GKDTGAELPENPILVARNIGPAELLEYGRSLKGIILEEGSVGSHAAIVARALAIPLVVRVARITTEGLNGDHVLVDGDNA VVHLRPDDPVVSAFRDKIAMQAKAQERYSSIREKPAITVDGKRINLMMNAGLMADLPSLENSGAEGVGLFRTELQFLVRN QMPKRSELKGLYQRVLEAAGGKRVVFRTLDIGSDKVLPYMKPTDEPNPALGWRAIRVGLDKPGVMRMQLQALIRAANGGP LTVMFPFVAQFEEYRLAREEVNKTIERERRLGHVLPSTLEIGAMLETPSLGFAPLKFFEEVDFLSIGGNDLKQFFFAADR ENERVRRRYDTLNVSFLSFIERIVERCDISGTPLSFCGEDAGRPIEAVCLAAMGIRTLSMRPASIGPVKSLLMRVDLGEL RKIISDARHRGDQTVRPAVMQYLREL >Mature_746_residues MVENTESESRKLLGRLREAMAGDDAGQARLDKITQLIADSMGTEVCSIYLFRDEDTLELCATEGLNRESVHQTRMRVGEG LVGRVARTGKVINTPDAPSARGFRYMPETGEERFSSFLGIPIQRLGEMMGVLVVQSKESREYSADAVYALEVVAMVIAEM TELGAFVGEGSAMSPLHQQSVLLKGIAAQEGAAEGNIWLHEPRVVVTNPIADDPHRELERLQEAVEELRVGVDKMLQVSS NGDKEQAQVLETYRMFANSKGWMRRMEEDIARGLSAEAAVEKEQSLARGRMAQVQDAYLRERLSDLDDLSNRLLRILTGQ GKDTGAELPENPILVARNIGPAELLEYGRSLKGIILEEGSVGSHAAIVARALAIPLVVRVARITTEGLNGDHVLVDGDNA VVHLRPDDPVVSAFRDKIAMQAKAQERYSSIREKPAITVDGKRINLMMNAGLMADLPSLENSGAEGVGLFRTELQFLVRN QMPKRSELKGLYQRVLEAAGGKRVVFRTLDIGSDKVLPYMKPTDEPNPALGWRAIRVGLDKPGVMRMQLQALIRAANGGP LTVMFPFVAQFEEYRLAREEVNKTIERERRLGHVLPSTLEIGAMLETPSLGFAPLKFFEEVDFLSIGGNDLKQFFFAADR ENERVRRRYDTLNVSFLSFIERIVERCDISGTPLSFCGEDAGRPIEAVCLAAMGIRTLSMRPASIGPVKSLLMRVDLGEL RKIISDARHRGDQTVRPAVMQYLREL
Specific function: Component of the phosphoenolpyruvate-dependent nitrogen- metabolic phosphotransferase system (nitrogen-metabolic PTS), that seems to be involved in regulating nitrogen metabolism. Enzyme I- Ntr transfers the phosphoryl group from phosphoenolpyruvate (PEP)
COG id: COG3605
COG function: function code T; Signal transduction protein containing GAF and PtsI domains
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GAF domain [H]
Homologues:
Organism=Escherichia coli, GI1789193, Length=725, Percent_Identity=34.0689655172414, Blast_Score=337, Evalue=1e-93, Organism=Escherichia coli, GI1788756, Length=442, Percent_Identity=34.3891402714932, Blast_Score=280, Evalue=2e-76, Organism=Escherichia coli, GI1788726, Length=469, Percent_Identity=34.9680170575693, Blast_Score=253, Evalue=4e-68, Organism=Escherichia coli, GI48994992, Length=489, Percent_Identity=29.8568507157464, Blast_Score=242, Evalue=6e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003018 - InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR008731 - InterPro: IPR015813 [H]
Pfam domain/function: PF01590 GAF; PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF02896 PEP-utilizers_C [H]
EC number: =2.7.3.9 [H]
Molecular weight: Translated: 82610; Mature: 82610
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVENTESESRKLLGRLREAMAGDDAGQARLDKITQLIADSMGTEVCSIYLFRDEDTLELC CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHH ATEGLNRESVHQTRMRVGEGLVGRVARTGKVINTPDAPSARGFRYMPETGEERFSSFLGI HHCCCCHHHHHHHHHHHCCCHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHCC PIQRLGEMMGVLVVQSKESREYSADAVYALEVVAMVIAEMTELGAFVGEGSAMSPLHQQS CHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH VLLKGIAAQEGAAEGNIWLHEPRVVVTNPIADDPHRELERLQEAVEELRVGVDKMLQVSS HHHHHHHHCCCCCCCCEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHCC NGDKEQAQVLETYRMFANSKGWMRRMEEDIARGLSAEAAVEKEQSLARGRMAQVQDAYLR CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ERLSDLDDLSNRLLRILTGQGKDTGAELPENPILVARNIGPAELLEYGRSLKGIILEEGS HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCEEEECCC VGSHAAIVARALAIPLVVRVARITTEGLNGDHVLVDGDNAVVHLRPDDPVVSAFRDKIAM CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHH QAKAQERYSSIREKPAITVDGKRINLMMNAGLMADLPSLENSGAEGVGLFRTELQFLVRN HHHHHHHHHHHHHCCCEEECCCEEEEEECCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHH QMPKRSELKGLYQRVLEAAGGKRVVFRTLDIGSDKVLPYMKPTDEPNPALGWRAIRVGLD CCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCC KPGVMRMQLQALIRAANGGPLTVMFPFVAQFEEYRLAREEVNKTIERERRLGHVLPSTLE CCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH IGAMLETPSLGFAPLKFFEEVDFLSIGGNDLKQFFFAADRENERVRRRYDTLNVSFLSFI HCEEECCCCCCCHHHHHHHHCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHH ERIVERCDISGTPLSFCGEDAGRPIEAVCLAAMGIRTLSMRPASIGPVKSLLMRVDLGEL HHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHH RKIISDARHRGDQTVRPAVMQYLREL HHHHHHHHHCCCCCHHHHHHHHHHHC >Mature Secondary Structure MVENTESESRKLLGRLREAMAGDDAGQARLDKITQLIADSMGTEVCSIYLFRDEDTLELC CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHH ATEGLNRESVHQTRMRVGEGLVGRVARTGKVINTPDAPSARGFRYMPETGEERFSSFLGI HHCCCCHHHHHHHHHHHCCCHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHCC PIQRLGEMMGVLVVQSKESREYSADAVYALEVVAMVIAEMTELGAFVGEGSAMSPLHQQS CHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH VLLKGIAAQEGAAEGNIWLHEPRVVVTNPIADDPHRELERLQEAVEELRVGVDKMLQVSS HHHHHHHHCCCCCCCCEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHCC NGDKEQAQVLETYRMFANSKGWMRRMEEDIARGLSAEAAVEKEQSLARGRMAQVQDAYLR CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ERLSDLDDLSNRLLRILTGQGKDTGAELPENPILVARNIGPAELLEYGRSLKGIILEEGS HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCEEEECCC VGSHAAIVARALAIPLVVRVARITTEGLNGDHVLVDGDNAVVHLRPDDPVVSAFRDKIAM CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHH QAKAQERYSSIREKPAITVDGKRINLMMNAGLMADLPSLENSGAEGVGLFRTELQFLVRN HHHHHHHHHHHHHCCCEEECCCEEEEEECCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHH QMPKRSELKGLYQRVLEAAGGKRVVFRTLDIGSDKVLPYMKPTDEPNPALGWRAIRVGLD CCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCC KPGVMRMQLQALIRAANGGPLTVMFPFVAQFEEYRLAREEVNKTIERERRLGHVLPSTLE CCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH IGAMLETPSLGFAPLKFFEEVDFLSIGGNDLKQFFFAADRENERVRRRYDTLNVSFLSFI HCEEECCCCCCCHHHHHHHHCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHH ERIVERCDISGTPLSFCGEDAGRPIEAVCLAAMGIRTLSMRPASIGPVKSLLMRVDLGEL HHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHH RKIISDARHRGDQTVRPAVMQYLREL HHHHHHHHHCCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 7896715; 8973315 [H]