| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is guaD [H]
Identifier: 99081746
GI number: 99081746
Start: 2007845
End: 2009134
Strand: Direct
Name: guaD [H]
Synonym: TM1040_1905
Alternate gene names: 99081746
Gene position: 2007845-2009134 (Clockwise)
Preceding gene: 99081743
Following gene: 99081751
Centisome position: 62.73
GC content: 64.5
Gene sequence:
>1290_bases ATGAAACAAGATCTCATTCTTCTGGGCCGAGTGCTGTCTTTTTGCGCCTCCCCTTTCGCGCCCGATGGGCCCGAGGCGGC CGTCGAGGAACACGAAGCCATTGCCCTGCGCGCGGGCAAGATCGTGGCGCTTGGCAGCCGGGCAGCGCTCAGCAAGGTGC TGCCAGAGGCAGAGATCGTCGATCACGGGCAGAAGCTGATCGTGCCGGGCTTTGTCGATGCCCATGTGCATTATCCGCAG ACCGCGATCATCGCCAGCTGGGGCAAGCGGCTGATCGACTGGCTCAACACCTATACCTTTCCCGAGGAGATGCGGTTTGG CAACCCGGCCTATGCCGCAGAGATCGCAGCGCGCTACCTGGATCTGACCACCGCCTGCGGCACCACGACGGTTGCGAGCT ACTGCACCATCCATCCCGAGAGCGTTGATGCGTTGTTCGAGGCGGCGCAGGCCCGCGGGCAGCGCGTGGTGGCCGGCAAG ACCTGCATGGACCGCAACGCGCCCGAAGGCCTGCGCGATACGCCGCAATCCGCCTATGACGACAGCGCCGCGCTGATCCA GCGCTGGCATGGGAGGGAGCGGCTCATCTATGCGATTACGCCACGGTTTTCACCAACCTCCACCCCAGAACAACTCGAAG CGCTCGGCGCACTCTGGACGGCGCATCCTACCTGCCTGATGCAGACCCATCTGAGCGAGCAACTGGACGAGATCGAATGG GTCCGAACCCTCTTTCCCGAGGCGCGCGACTACCTTGACACCTACGAGCGCTACGGTCTTCTGCGCGAAGGCGCGCTCTT TGGCCATGCCATCCATCTTGAACCCCGCGAACGCGCCCGCCTCCTGGAGGCCCGCGCCAGCCTGATCCACTGCCCCACCT CCAATACCTTCATCGGTTCAGGGCTTTTTGACATGAACGGCCTCATGCGCGAGGGCCACCGGATCGGCCTTGCCACCGAC ACCGGCGGCGGGTCGAGTTTTTCGATGCTGCGTACCATGGCCGCCGCCTATGAGGTCGCCCAGCTGCGGGGCACGCCTTT GCACGCGGCACAGCTCCTGTGGCTTGCAACCCTCGGGTCGGCCACGGCACTTGGGCTTCAGGACAAGGTCGGTAATCTCG CCGTGGGACGGGAGGCCGACCTTGTGGTGCTTGATCTTGCCTCGACCCCGGCCATTGCCCAGCGTGCGACACGCGCAGAG ACCCTCTGGGAGGCCCTCTTTCCCACGCTGATGATGGGCGATGACCGCGCCATTGCCGAGGTCCGCATCAACGGGCAGAA AGCGGTCTAG
Upstream 100 bases:
>100_bases GATGCGGAAGGGCAAAAACAACGGCCCATCAGCAATTTACCCCTGCCGCCCCACGCCCTATCCTGTGCAGAGCTGATTTG ACAACGAATGTGACATCGCA
Downstream 100 bases:
>100_bases CAAAAAGGGGCGCAGCCGCGCGCCCCTCTTCTTCTAACCAAAATATCCCGGAGCGCGAGGCAGAGCCTCGCATCCCCGCT CGCGCCCAACCGCGACGCTT
Product: guanine deaminase
Products: NA
Alternate protein names: Guanase; Guanine aminase; Guanine aminohydrolase; GAH [H]
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MKQDLILLGRVLSFCASPFAPDGPEAAVEEHEAIALRAGKIVALGSRAALSKVLPEAEIVDHGQKLIVPGFVDAHVHYPQ TAIIASWGKRLIDWLNTYTFPEEMRFGNPAYAAEIAARYLDLTTACGTTTVASYCTIHPESVDALFEAAQARGQRVVAGK TCMDRNAPEGLRDTPQSAYDDSAALIQRWHGRERLIYAITPRFSPTSTPEQLEALGALWTAHPTCLMQTHLSEQLDEIEW VRTLFPEARDYLDTYERYGLLREGALFGHAIHLEPRERARLLEARASLIHCPTSNTFIGSGLFDMNGLMREGHRIGLATD TGGGSSFSMLRTMAAAYEVAQLRGTPLHAAQLLWLATLGSATALGLQDKVGNLAVGREADLVVLDLASTPAIAQRATRAE TLWEALFPTLMMGDDRAIAEVRINGQKAV
Sequences:
>Translated_429_residues MKQDLILLGRVLSFCASPFAPDGPEAAVEEHEAIALRAGKIVALGSRAALSKVLPEAEIVDHGQKLIVPGFVDAHVHYPQ TAIIASWGKRLIDWLNTYTFPEEMRFGNPAYAAEIAARYLDLTTACGTTTVASYCTIHPESVDALFEAAQARGQRVVAGK TCMDRNAPEGLRDTPQSAYDDSAALIQRWHGRERLIYAITPRFSPTSTPEQLEALGALWTAHPTCLMQTHLSEQLDEIEW VRTLFPEARDYLDTYERYGLLREGALFGHAIHLEPRERARLLEARASLIHCPTSNTFIGSGLFDMNGLMREGHRIGLATD TGGGSSFSMLRTMAAAYEVAQLRGTPLHAAQLLWLATLGSATALGLQDKVGNLAVGREADLVVLDLASTPAIAQRATRAE TLWEALFPTLMMGDDRAIAEVRINGQKAV >Mature_429_residues MKQDLILLGRVLSFCASPFAPDGPEAAVEEHEAIALRAGKIVALGSRAALSKVLPEAEIVDHGQKLIVPGFVDAHVHYPQ TAIIASWGKRLIDWLNTYTFPEEMRFGNPAYAAEIAARYLDLTTACGTTTVASYCTIHPESVDALFEAAQARGQRVVAGK TCMDRNAPEGLRDTPQSAYDDSAALIQRWHGRERLIYAITPRFSPTSTPEQLEALGALWTAHPTCLMQTHLSEQLDEIEW VRTLFPEARDYLDTYERYGLLREGALFGHAIHLEPRERARLLEARASLIHCPTSNTFIGSGLFDMNGLMREGHRIGLATD TGGGSSFSMLRTMAAAYEVAQLRGTPLHAAQLLWLATLGSATALGLQDKVGNLAVGREADLVVLDLASTPAIAQRATRAE TLWEALFPTLMMGDDRAIAEVRINGQKAV
Specific function: Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATZ/TRZ family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=428, Percent_Identity=31.7757009345794, Blast_Score=201, Evalue=8e-52, Organism=Escherichia coli, GI1789249, Length=420, Percent_Identity=42.3809523809524, Blast_Score=366, Evalue=1e-102, Organism=Saccharomyces cerevisiae, GI6319963, Length=335, Percent_Identity=35.2238805970149, Blast_Score=209, Evalue=6e-55, Organism=Drosophila melanogaster, GI24643849, Length=424, Percent_Identity=34.4339622641509, Blast_Score=226, Evalue=2e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR014311 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.3 [H]
Molecular weight: Translated: 46829; Mature: 46829
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQDLILLGRVLSFCASPFAPDGPEAAVEEHEAIALRAGKIVALGSRAALSKVLPEAEIV CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEEECCCEEEECCHHHHHHHCCCHHHH DHGQKLIVPGFVDAHVHYPQTAIIASWGKRLIDWLNTYTFPEEMRFGNPAYAAEIAARYL HCCCEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHH DLTTACGTTTVASYCTIHPESVDALFEAAQARGQRVVAGKTCMDRNAPEGLRDTPQSAYD HHHHHCCHHHHHHHEEECHHHHHHHHHHHHHCCCEEEECCHHHCCCCCCCCCCCCCHHCC DSAALIQRWHGRERLIYAITPRFSPTSTPEQLEALGALWTAHPTCLMQTHLSEQLDEIEW HHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VRTLFPEARDYLDTYERYGLLREGALFGHAIHLEPRERARLLEARASLIHCPTSNTFIGS HHHHHHHHHHHHHHHHHHCCHHCCCCCCEEEECCHHHHHHHHHHHHHEEECCCCCCEECC GLFDMNGLMREGHRIGLATDTGGGSSFSMLRTMAAAYEVAQLRGTPLHAAQLLWLATLGS CCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC ATALGLQDKVGNLAVGREADLVVLDLASTPAIAQRATRAETLWEALFPTLMMGDDRAIAE HHCCCCHHCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE VRINGQKAV EEECCCCCC >Mature Secondary Structure MKQDLILLGRVLSFCASPFAPDGPEAAVEEHEAIALRAGKIVALGSRAALSKVLPEAEIV CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEEECCCEEEECCHHHHHHHCCCHHHH DHGQKLIVPGFVDAHVHYPQTAIIASWGKRLIDWLNTYTFPEEMRFGNPAYAAEIAARYL HCCCEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHH DLTTACGTTTVASYCTIHPESVDALFEAAQARGQRVVAGKTCMDRNAPEGLRDTPQSAYD HHHHHCCHHHHHHHEEECHHHHHHHHHHHHHCCCEEEECCHHHCCCCCCCCCCCCCHHCC DSAALIQRWHGRERLIYAITPRFSPTSTPEQLEALGALWTAHPTCLMQTHLSEQLDEIEW HHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VRTLFPEARDYLDTYERYGLLREGALFGHAIHLEPRERARLLEARASLIHCPTSNTFIGS HHHHHHHHHHHHHHHHHHCCHHCCCCCCEEEECCHHHHHHHHHHHHHEEECCCCCCEECC GLFDMNGLMREGHRIGLATDTGGGSSFSMLRTMAAAYEVAQLRGTPLHAAQLLWLATLGS CCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC ATALGLQDKVGNLAVGREADLVVLDLASTPAIAQRATRAETLWEALFPTLMMGDDRAIAE HHCCCCHHCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE VRINGQKAV EEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 10913105 [H]