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The map label for this gene is yggA [C]

Identifier: 99081731

GI number: 99081731

Start: 1991345

End: 1991974

Strand: Reverse

Name: yggA [C]

Synonym: TM1040_1890

Alternate gene names: 99081731

Gene position: 1991974-1991345 (Counterclockwise)

Preceding gene: 161899028

Following gene: 99081730

Centisome position: 62.23

GC content: 65.4

Gene sequence:

>630_bases
ATGCAGCCCCTCCCGATGACCCCAGACATGCTGCCAATTCTGATGGCAGGCTTTGGCCTTGGCTTCAGCCTCATCCTTGC
GATTGGCGCGCAGAACGCTTTTGTGCTGCGGCAGGGGATACGCGGCCAGCATGTCTTGCCAATCGTGCTGACCTGCGCTC
TGTCGGATGCGCTGCTGATCACGGCGGGGGTTGCGGGCTTTGGGACGCTGACCTCTGCGTTGCCGTGGTTCGAGCCCGTG
ATGCGCATCGGCGGCGCGCTGTTCCTGACCGGCTACGGGCTGCGGTCGCTGCGCTCGGCGTGGACGGGCGGGGCTGCGCT
TTCGACCGAGGGGCAGGGGGTTCAGACCGCGCTCTGGCCAGCGGTTCTGACCTGCCTCGCCTTCACCTGGCTCAATCCGC
ATGTCTATCTCGACACGGTTGTGCTGCTGGGCGCGATCTCGGCGCAATATACGCCGGCCTGGGTCTTTGGCCTTGGTGCG
GTGACGGCCTCTTTTGTGTTCTTTTTCACGCTCGGGTATGGAGCGCGGCTGCTGGCACCGATCTTTGCCCGCCCCCGCGC
GTGGCAGGTGCTGGACGCGCTGATCGGCGTGGTCATGCTGGCGCTTGCGGTCAAGCTCGCGCTGATGTGA

Upstream 100 bases:

>100_bases
TTAATATGCCACAGTATCTTTAATTTGATTACGCCACCCCGGCTGGTTAGTCAAAGGCAGCCGCAGGACTGCGGCGCACA
CAGCCCAAAGGACAGACGCC

Downstream 100 bases:

>100_bases
GACCCTGCGCAGACCCTGTGCAAAAGCAAAGGGCTGCCAGAACGCTGTCTTTCGCCTAGCTTGAAGGAAAGCGGCGAGGA
AAGGACAGATCCATGAGCTG

Product: lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MQPLPMTPDMLPILMAGFGLGFSLILAIGAQNAFVLRQGIRGQHVLPIVLTCALSDALLITAGVAGFGTLTSALPWFEPV
MRIGGALFLTGYGLRSLRSAWTGGAALSTEGQGVQTALWPAVLTCLAFTWLNPHVYLDTVVLLGAISAQYTPAWVFGLGA
VTASFVFFFTLGYGARLLAPIFARPRAWQVLDALIGVVMLALAVKLALM

Sequences:

>Translated_209_residues
MQPLPMTPDMLPILMAGFGLGFSLILAIGAQNAFVLRQGIRGQHVLPIVLTCALSDALLITAGVAGFGTLTSALPWFEPV
MRIGGALFLTGYGLRSLRSAWTGGAALSTEGQGVQTALWPAVLTCLAFTWLNPHVYLDTVVLLGAISAQYTPAWVFGLGA
VTASFVFFFTLGYGARLLAPIFARPRAWQVLDALIGVVMLALAVKLALM
>Mature_209_residues
MQPLPMTPDMLPILMAGFGLGFSLILAIGAQNAFVLRQGIRGQHVLPIVLTCALSDALLITAGVAGFGTLTSALPWFEPV
MRIGGALFLTGYGLRSLRSAWTGGAALSTEGQGVQTALWPAVLTCLAFTWLNPHVYLDTVVLLGAISAQYTPAWVFGLGA
VTASFVFFFTLGYGARLLAPIFARPRAWQVLDALIGVVMLALAVKLALM

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=200, Percent_Identity=39.5, Blast_Score=126, Evalue=9e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22093; Mature: 22093

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPLPMTPDMLPILMAGFGLGFSLILAIGAQNAFVLRQGIRGQHVLPIVLTCALSDALLI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHH
TAGVAGFGTLTSALPWFEPVMRIGGALFLTGYGLRSLRSAWTGGAALSTEGQGVQTALWP
HHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHH
AVLTCLAFTWLNPHVYLDTVVLLGAISAQYTPAWVFGLGAVTASFVFFFTLGYGARLLAP
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFARPRAWQVLDALIGVVMLALAVKLALM
HHCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQPLPMTPDMLPILMAGFGLGFSLILAIGAQNAFVLRQGIRGQHVLPIVLTCALSDALLI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHH
TAGVAGFGTLTSALPWFEPVMRIGGALFLTGYGLRSLRSAWTGGAALSTEGQGVQTALWP
HHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHH
AVLTCLAFTWLNPHVYLDTVVLLGAISAQYTPAWVFGLGAVTASFVFFFTLGYGARLLAP
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFARPRAWQVLDALIGVVMLALAVKLALM
HHCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]