| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081688
Identifier: 99081688
GI number: 99081688
Start: 1947965
End: 1948477
Strand: Reverse
Name: 99081688
Synonym: TM1040_1847
Alternate gene names: NA
Gene position: 1948477-1947965 (Counterclockwise)
Preceding gene: 99081689
Following gene: 99081687
Centisome position: 60.87
GC content: 69.2
Gene sequence:
>513_bases ATGATCACGCGGATGGTGACACTCTTGGGCGGCGCGGGCGCGGGCTTGGGCCTGTCGCAATTCCCGGCCTATGCGCAGGC CTATCTGCAACGTCTCGGGGGCCATGTGGATGCGCTGCGACGCACCGTGGCCGAGTTTGACGCCGATGCCGCCGCGCTTG GGCTTGAGCGGCACGCGGCCCTTGTGCAGCTTGCGCAGGGCGGAGAGATGGGCGCCGCACGGGCCGAAACCATGGCGGCC ACCATCGACCGCTATGGCAGGCTCTCGTCCGATCTGCACGAGTTGAGCGCCATGGCGCCGGTGGAACGCGCGCTGCATCT GGGCCGCTTTGCCGAGGCCGAGATCGCCTCTGCCACCCTCAGCGCCTTTGAACCTGCGGTTGCGGTCTCGTTGGATGCGC TGCTGCTGGCGGCCATTGGTGCGCTCGTGGGGGGCGGTCTGATCTGGGGGATGATGGCAGGCGGGCGGCGTGTCCTTGCG CGGCGACCGGCTGGGCGCGACAGGCTTGCTTGA
Upstream 100 bases:
>100_bases GGCGCGGGGCGCGCGTTTCATGGCGGCCTCTGCCCCAAGGCGGAGCAGCAAGAACGCTAAGCGGTGCTTGGGGCGGCAAG AACAACGAGGGACGGCGACG
Downstream 100 bases:
>100_bases CCCGGTCTCTGCACGCCCCTAGGGTCTGCGCGAGATCTGCATCGCGGCTGCGATGCCCTATGTTCACCGCGAGAGGAACA CCTCCTAAATGGCTGCGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MITRMVTLLGGAGAGLGLSQFPAYAQAYLQRLGGHVDALRRTVAEFDADAAALGLERHAALVQLAQGGEMGAARAETMAA TIDRYGRLSSDLHELSAMAPVERALHLGRFAEAEIASATLSAFEPAVAVSLDALLLAAIGALVGGGLIWGMMAGGRRVLA RRPAGRDRLA
Sequences:
>Translated_170_residues MITRMVTLLGGAGAGLGLSQFPAYAQAYLQRLGGHVDALRRTVAEFDADAAALGLERHAALVQLAQGGEMGAARAETMAA TIDRYGRLSSDLHELSAMAPVERALHLGRFAEAEIASATLSAFEPAVAVSLDALLLAAIGALVGGGLIWGMMAGGRRVLA RRPAGRDRLA >Mature_170_residues MITRMVTLLGGAGAGLGLSQFPAYAQAYLQRLGGHVDALRRTVAEFDADAAALGLERHAALVQLAQGGEMGAARAETMAA TIDRYGRLSSDLHELSAMAPVERALHLGRFAEAEIASATLSAFEPAVAVSLDALLLAAIGALVGGGLIWGMMAGGRRVLA RRPAGRDRLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17577; Mature: 17577
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITRMVTLLGGAGAGLGLSQFPAYAQAYLQRLGGHVDALRRTVAEFDADAAALGLERHAA CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHH LVQLAQGGEMGAARAETMAATIDRYGRLSSDLHELSAMAPVERALHLGRFAEAEIASATL HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAFEPAVAVSLDALLLAAIGALVGGGLIWGMMAGGRRVLARRPAGRDRLA HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCC >Mature Secondary Structure MITRMVTLLGGAGAGLGLSQFPAYAQAYLQRLGGHVDALRRTVAEFDADAAALGLERHAA CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHH LVQLAQGGEMGAARAETMAATIDRYGRLSSDLHELSAMAPVERALHLGRFAEAEIASATL HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAFEPAVAVSLDALLLAAIGALVGGGLIWGMMAGGRRVLARRPAGRDRLA HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA