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The map label for this gene is ydjI [H]

Identifier: 99081658

GI number: 99081658

Start: 1910678

End: 1911868

Strand: Direct

Name: ydjI [H]

Synonym: TM1040_1817

Alternate gene names: 99081658

Gene position: 1910678-1911868 (Clockwise)

Preceding gene: 99081657

Following gene: 99081659

Centisome position: 59.69

GC content: 63.39

Gene sequence:

>1191_bases
TTGGGCATTTTTGATTTTCTCAAAGGCGAATTCATCGACGTCATCCATTGGACCGATGATACCCGCGACACCATGGTCAT
GCGTTTCGAGCGCGAGGGCCATGCGATCAAATACGGGGCCAAGCTGACGGTCCGCGAGGGTCAGGCGGCCGTGTTTGTGC
ATGAAGGCCAGCTGGCGGATGTGTTCACGCCCGGGCTTTATATGCTTGAAACCAACAACATGCCGGTGCTGACCACGCTT
CAGCATTGGGATCACGGGTTTCAGTCGCCGTTCAAATCCGAGATCTATTTTGTCGCCACCACGCGGTTCAATGACCTCAA
ATGGGGCACCAAGAACCCGATCATGTGTCGCGACCCGGAGTTCGGCCCGGTGCGCCTGCGCGCCTTTGGCACCTATTCGG
TGCGGGTGGTGGACCCGGCCCGCTTCCTGACGGAAATCGTCGGCACCGATGGTGAGTTCACCATGGATGAGATCTCTTAC
CAGATCCGCAATATCATTGTGCAGGAGTTCTCGCGCGCGATTGCCGCTTCTGGCATCCCGGTGCTTGATATGGCCGCCAA
TACCGCCGATCTGGGCAAGCTGGTCGCCGCCGAGATCGGCCCCGTGGTGGCTGAATACGGCCTCGCGATCCCCGAGCTTT
ATGTCGAGAATATCTCCCTGCCGCCCGCGGTCGAGCAGGCGATGGACAAGCGCACCCAGATGGGCATCATCGGCGATCTC
GGCCGCTATACGCAATTCAAGGCTGCCGAAGCCATGGAAGCGGCTGCCAAAACGCCCAACAGCGGCATGGGCGCCGGGCT
TGGGATGGGAATGGGCATGGCAATGGCACAGCAGATGGGCCACGCGATGCAAGGAGGCGCGACACCTCAGGCAGCGGGTC
AACCGACCGGGCCATGGGGCGCACGGCCCGCACCCGCTGCGCCGCAACCTGCGGCTCAGGCCGCACCGATGGCACCGCCG
CCCCCGCCGGTGGAGCATGTCTGGCACATCGCGGAAAACGGTCAGACCTCGGGTCCATACTCCAAGGCGCGCATGGGGCG
CATGGCGCAAGAAGGCCAGCTGACGCGCGACACCCATGTATGGACCCCCGGTCAGGACGGCTGGATGCGCGCGGGCGATG
TGACCGAGCTGGCACAGCTCTTCACCATCCTGCCGCCGCCCCCACCGCCGCCCCCGCCCGCAGGCGGCTAA

Upstream 100 bases:

>100_bases
GCGCGTCTCCTCTGCAAAAACGCGCCTTTGGGCGGGCTGCCTCTGGTTTCGGCCCCGGTGGGTTGCTACATCTTGCAAAA
CAGCCGTGGGAGGGCACAGC

Downstream 100 bases:

>100_bases
CGCCCGCAGGATAGATCAATGGCAGCCGGGCGCCGTGAGTGTGCCCGGCCCTCTTATGGGGGCAAGCACAGATTGCCCCC
GTGCTGCCGCCCCTGACTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MGIFDFLKGEFIDVIHWTDDTRDTMVMRFEREGHAIKYGAKLTVREGQAAVFVHEGQLADVFTPGLYMLETNNMPVLTTL
QHWDHGFQSPFKSEIYFVATTRFNDLKWGTKNPIMCRDPEFGPVRLRAFGTYSVRVVDPARFLTEIVGTDGEFTMDEISY
QIRNIIVQEFSRAIAASGIPVLDMAANTADLGKLVAAEIGPVVAEYGLAIPELYVENISLPPAVEQAMDKRTQMGIIGDL
GRYTQFKAAEAMEAAAKTPNSGMGAGLGMGMGMAMAQQMGHAMQGGATPQAAGQPTGPWGARPAPAAPQPAAQAAPMAPP
PPPVEHVWHIAENGQTSGPYSKARMGRMAQEGQLTRDTHVWTPGQDGWMRAGDVTELAQLFTILPPPPPPPPPAGG

Sequences:

>Translated_396_residues
MGIFDFLKGEFIDVIHWTDDTRDTMVMRFEREGHAIKYGAKLTVREGQAAVFVHEGQLADVFTPGLYMLETNNMPVLTTL
QHWDHGFQSPFKSEIYFVATTRFNDLKWGTKNPIMCRDPEFGPVRLRAFGTYSVRVVDPARFLTEIVGTDGEFTMDEISY
QIRNIIVQEFSRAIAASGIPVLDMAANTADLGKLVAAEIGPVVAEYGLAIPELYVENISLPPAVEQAMDKRTQMGIIGDL
GRYTQFKAAEAMEAAAKTPNSGMGAGLGMGMGMAMAQQMGHAMQGGATPQAAGQPTGPWGARPAPAAPQPAAQAAPMAPP
PPPVEHVWHIAENGQTSGPYSKARMGRMAQEGQLTRDTHVWTPGQDGWMRAGDVTELAQLFTILPPPPPPPPPAGG
>Mature_395_residues
GIFDFLKGEFIDVIHWTDDTRDTMVMRFEREGHAIKYGAKLTVREGQAAVFVHEGQLADVFTPGLYMLETNNMPVLTTLQ
HWDHGFQSPFKSEIYFVATTRFNDLKWGTKNPIMCRDPEFGPVRLRAFGTYSVRVVDPARFLTEIVGTDGEFTMDEISYQ
IRNIIVQEFSRAIAASGIPVLDMAANTADLGKLVAAEIGPVVAEYGLAIPELYVENISLPPAVEQAMDKRTQMGIIGDLG
RYTQFKAAEAMEAAAKTPNSGMGAGLGMGMGMAMAQQMGHAMQGGATPQAAGQPTGPWGARPAPAAPQPAAQAAPMAPPP
PPVEHVWHIAENGQTSGPYSKARMGRMAQEGQLTRDTHVWTPGQDGWMRAGDVTELAQLFTILPPPPPPPPPAGG

Specific function: Unknown

COG id: COG4260

COG function: function code S; Putative virion core protein (lumpy skin disease virus)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 42844; Mature: 42713

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIFDFLKGEFIDVIHWTDDTRDTMVMRFEREGHAIKYGAKLTVREGQAAVFVHEGQLAD
CCHHHHHCCCEEEEEEECCCCCCEEEEEEECCCCEEEECCEEEEECCCEEEEEECCCEEE
VFTPGLYMLETNNMPVLTTLQHWDHGFQSPFKSEIYFVATTRFNDLKWGTKNPIMCRDPE
CCCCCEEEEECCCCCEEEEHHHHCCHHCCCCCCCEEEEEEECCCCCCCCCCCCEEECCCC
FGPVRLRAFGTYSVRVVDPARFLTEIVGTDGEFTMDEISYQIRNIIVQEFSRAIAASGIP
CCCEEEEEEEEEEEEEECHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCC
VLDMAANTADLGKLVAAEIGPVVAEYGLAIPELYVENISLPPAVEQAMDKRTQMGIIGDL
EEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHCCHHHCC
GRYTQFKAAEAMEAAAKTPNSGMGAGLGMGMGMAMAQQMGHAMQGGATPQAAGQPTGPWG
CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
ARPAPAAPQPAAQAAPMAPPPPPVEHVWHIAENGQTSGPYSKARMGRMAQEGQLTRDTHV
CCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEE
WTPGQDGWMRAGDVTELAQLFTILPPPPPPPPPAGG
ECCCCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCC
>Mature Secondary Structure 
GIFDFLKGEFIDVIHWTDDTRDTMVMRFEREGHAIKYGAKLTVREGQAAVFVHEGQLAD
CHHHHHCCCEEEEEEECCCCCCEEEEEEECCCCEEEECCEEEEECCCEEEEEECCCEEE
VFTPGLYMLETNNMPVLTTLQHWDHGFQSPFKSEIYFVATTRFNDLKWGTKNPIMCRDPE
CCCCCEEEEECCCCCEEEEHHHHCCHHCCCCCCCEEEEEEECCCCCCCCCCCCEEECCCC
FGPVRLRAFGTYSVRVVDPARFLTEIVGTDGEFTMDEISYQIRNIIVQEFSRAIAASGIP
CCCEEEEEEEEEEEEEECHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCC
VLDMAANTADLGKLVAAEIGPVVAEYGLAIPELYVENISLPPAVEQAMDKRTQMGIIGDL
EEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHCCHHHCC
GRYTQFKAAEAMEAAAKTPNSGMGAGLGMGMGMAMAQQMGHAMQGGATPQAAGQPTGPWG
CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
ARPAPAAPQPAAQAAPMAPPPPPVEHVWHIAENGQTSGPYSKARMGRMAQEGQLTRDTHV
CCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEE
WTPGQDGWMRAGDVTELAQLFTILPPPPPPPPPAGG
ECCCCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9455482; 9384377 [H]