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The map label for this gene is yjiB [H]

Identifier: 99081657

GI number: 99081657

Start: 1909253

End: 1910500

Strand: Direct

Name: yjiB [H]

Synonym: TM1040_1816

Alternate gene names: 99081657

Gene position: 1909253-1910500 (Clockwise)

Preceding gene: 99081650

Following gene: 99081658

Centisome position: 59.65

GC content: 61.62

Gene sequence:

>1248_bases
TTGCGCCACATTACAAAGCCCCCCTTGCCAAGACCAGAGACCTCGGCAAAAACCGATTTTATGAAAACACTGACCCAATC
CCCGACCGACCCGGACTTTGTCCAGAACCCCTACCCGTTTTACGACGCGGCCCGCGCGGCCGGCAAACTTGGGTATTGGG
AAGAGTACAAAATGATGGCGGCCTTTGGTCATGACGTGGTGCACATGCTGCTGCGCGACCGCCGCTTTGGGCGCGAAATC
CCCGCCGAGATGGCCACCGAAGGCCCGGCGCATCTGGCGCCCTTCCTGCAAGTAGAGGCACATTCGCTTCTGGATGCGGA
ACCGCCCCGCCATACGCGGCTGCGCAAACTGGTGCTGCGCGCCTTCACCAGCCGCGAGATAAAGGCGCTTGCGCCGGGGC
TAGAGACGCTCTGCCACGAATTGATCAATGCGTTCCCCAAGGATGCGCCCTTTGATCTGCTCAGCAGCTATTGCACGCAG
GTGCCGGTGATCGCGATCTGTCGCCTGCTGGGCGTACCCGAGGCCATGGCGCCGCAACTTCTCGACTGGTCGCACAAGAT
GGTGGCGATGTATCAGGCCTCCAAGACCACCGAGACCGAACATGCCGCAGCACAGGCCAGCGCCGAGTTCATCGCCTTTT
TGACCGACTACGTAGACGAGCGCCGCAAGACCCCGGGCGAGGATCTCATCACCCGGCTCATTCAGGCCGAGGAAGATGGC
GAAAGCCTCTCGACGGACGAGCTCATCGGCACCTGCATCCTGCTCCTAAATGCTGGTCACGAGGCCACGGTGCATTCGCT
CGGCAACGGGGTGAAAACCATGCTCGAACAGGGCTGGTCTTCCGAGTGGCTTCAGCCCGATGGCATCAGCGGGCTCGTCG
AGGAAATCCTGCGCTATGACCCACCGCTCCATATGTTCACACGCTACGCCTATGAGGAGATCGAGATCATGGGCCACCGT
TTCCGGCGGGGCGATCAGGTGGCTCTGATGCTGGCGGCTGCCAACCGAGATCCGGAGGCGCTGGAGCGCGCCGATCAGTT
TGATCCCACGCGCCCGCCCAAGGTGAACAAGAGCTTTGGCGGCGGGCTGCATTTCTGTGTCGGCGCACCGCTTGCGCGGA
TGGAGATGGAGATCGCGCTGCCGATCCTTTTTGAGCGCTGCCCGGAGTTGAAACTGGCCGAGCCGCCCCAGTATTCCAAC
ACCTACCATTTCCATGGGCTGACCCGGCTTTGGGTGCAAACCCGCTAA

Upstream 100 bases:

>100_bases
GCCTGTCGATAGGCCGAAGACCAGACCACCGCAGAGAGCACGACAATGAAGAGCACAACACTGGCGACCAGCGCGAGACG
GGGGTGTCGAGGATTTAACA

Downstream 100 bases:

>100_bases
GGCGCTCTGACCAGGGGTCGTCTCCTTTGGGGGCGGCCCGCGTTGCTCTCTCTTCTGGCTGAGTTTGCGGGGAAACTGCG
CGTCTCCTCTGCAAAAACGC

Product: cytochrome P450

Products: ROH; oxidized flavoprotein; H2O

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MRHITKPPLPRPETSAKTDFMKTLTQSPTDPDFVQNPYPFYDAARAAGKLGYWEEYKMMAAFGHDVVHMLLRDRRFGREI
PAEMATEGPAHLAPFLQVEAHSLLDAEPPRHTRLRKLVLRAFTSREIKALAPGLETLCHELINAFPKDAPFDLLSSYCTQ
VPVIAICRLLGVPEAMAPQLLDWSHKMVAMYQASKTTETEHAAAQASAEFIAFLTDYVDERRKTPGEDLITRLIQAEEDG
ESLSTDELIGTCILLLNAGHEATVHSLGNGVKTMLEQGWSSEWLQPDGISGLVEEILRYDPPLHMFTRYAYEEIEIMGHR
FRRGDQVALMLAAANRDPEALERADQFDPTRPPKVNKSFGGGLHFCVGAPLARMEMEIALPILFERCPELKLAEPPQYSN
TYHFHGLTRLWVQTR

Sequences:

>Translated_415_residues
MRHITKPPLPRPETSAKTDFMKTLTQSPTDPDFVQNPYPFYDAARAAGKLGYWEEYKMMAAFGHDVVHMLLRDRRFGREI
PAEMATEGPAHLAPFLQVEAHSLLDAEPPRHTRLRKLVLRAFTSREIKALAPGLETLCHELINAFPKDAPFDLLSSYCTQ
VPVIAICRLLGVPEAMAPQLLDWSHKMVAMYQASKTTETEHAAAQASAEFIAFLTDYVDERRKTPGEDLITRLIQAEEDG
ESLSTDELIGTCILLLNAGHEATVHSLGNGVKTMLEQGWSSEWLQPDGISGLVEEILRYDPPLHMFTRYAYEEIEIMGHR
FRRGDQVALMLAAANRDPEALERADQFDPTRPPKVNKSFGGGLHFCVGAPLARMEMEIALPILFERCPELKLAEPPQYSN
TYHFHGLTRLWVQTR
>Mature_415_residues
MRHITKPPLPRPETSAKTDFMKTLTQSPTDPDFVQNPYPFYDAARAAGKLGYWEEYKMMAAFGHDVVHMLLRDRRFGREI
PAEMATEGPAHLAPFLQVEAHSLLDAEPPRHTRLRKLVLRAFTSREIKALAPGLETLCHELINAFPKDAPFDLLSSYCTQ
VPVIAICRLLGVPEAMAPQLLDWSHKMVAMYQASKTTETEHAAAQASAEFIAFLTDYVDERRKTPGEDLITRLIQAEEDG
ESLSTDELIGTCILLLNAGHEATVHSLGNGVKTMLEQGWSSEWLQPDGISGLVEEILRYDPPLHMFTRYAYEEIEIMGHR
FRRGDQVALMLAAANRDPEALERADQFDPTRPPKVNKSFGGGLHFCVGAPLARMEMEIALPILFERCPELKLAEPPQYSN
TYHFHGLTRLWVQTR

Specific function: Unknown

COG id: COG2124

COG function: function code Q; Cytochrome P450

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome P450 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001128
- InterPro:   IPR002397
- InterPro:   IPR017972 [H]

Pfam domain/function: PF00067 p450 [H]

EC number: 1.14.14.1

Molecular weight: Translated: 46804; Mature: 46804

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: PS00086 CYTOCHROME_P450

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHITKPPLPRPETSAKTDFMKTLTQSPTDPDFVQNPYPFYDAARAAGKLGYWEEYKMMA
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHCCCCCHHHHHHHH
AFGHDVVHMLLRDRRFGREIPAEMATEGPAHLAPFLQVEAHSLLDAEPPRHTRLRKLVLR
HHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AFTSREIKALAPGLETLCHELINAFPKDAPFDLLSSYCTQVPVIAICRLLGVPEAMAPQL
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHCCCHHHHHHH
LDWSHKMVAMYQASKTTETEHAAAQASAEFIAFLTDYVDERRKTPGEDLITRLIQAEEDG
HCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
ESLSTDELIGTCILLLNAGHEATVHSLGNGVKTMLEQGWSSEWLQPDGISGLVEEILRYD
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC
PPLHMFTRYAYEEIEIMGHRFRRGDQVALMLAAANRDPEALERADQFDPTRPPKVNKSFG
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCC
GGLHFCVGAPLARMEMEIALPILFERCPELKLAEPPQYSNTYHFHGLTRLWVQTR
CCEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHHHEECC
>Mature Secondary Structure
MRHITKPPLPRPETSAKTDFMKTLTQSPTDPDFVQNPYPFYDAARAAGKLGYWEEYKMMA
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHCCCCCHHHHHHHH
AFGHDVVHMLLRDRRFGREIPAEMATEGPAHLAPFLQVEAHSLLDAEPPRHTRLRKLVLR
HHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AFTSREIKALAPGLETLCHELINAFPKDAPFDLLSSYCTQVPVIAICRLLGVPEAMAPQL
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHCCCHHHHHHH
LDWSHKMVAMYQASKTTETEHAAAQASAEFIAFLTDYVDERRKTPGEDLITRLIQAEEDG
HCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
ESLSTDELIGTCILLLNAGHEATVHSLGNGVKTMLEQGWSSEWLQPDGISGLVEEILRYD
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC
PPLHMFTRYAYEEIEIMGHRFRRGDQVALMLAAANRDPEALERADQFDPTRPPKVNKSFG
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCC
GGLHFCVGAPLARMEMEIALPILFERCPELKLAEPPQYSNTYHFHGLTRLWVQTR
CCEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: RH; reduced flavoprotein; O2

Specific reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]