Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081649

Identifier: 99081649

GI number: 99081649

Start: 1899560

End: 1900498

Strand: Direct

Name: 99081649

Synonym: TM1040_1808

Alternate gene names: NA

Gene position: 1899560-1900498 (Clockwise)

Preceding gene: 99081648

Following gene: 99081650

Centisome position: 59.34

GC content: 60.49

Gene sequence:

>939_bases
ATGACAGTAAAATGGGGGCTTGTCGCCACGCTCAAAGCCGAGGCTGAGGCTGTTTTGAACTTTGCTGCTTGGCATCTGGA
GCAGGGCGCGCATCGCCTGTTTCTCTATCTGGACGCAGCCTGTCCTGACGCACTGCCGCATCTTCAGGATCACCCCCGTA
TTCGCGTGATCGAGACGACCGAGGCCCATTGGCTTAAGCGTCGCGGGCGCGTTCCGGAAAAACATCAGGTTCGCCAGAGC
CTCAACGCGACCCGCGCCTATCGACGACAAGCGCGCGATCTGGACTGGCTCATCCATATCGATGTGGACGAGTTCCTCTG
GTCCCCCGATCCGCTGGCGCCACAGCTGGAAGCACTCGACCCAGACGTCCTGTGCGCGCGCGTACGCCCGCTTGAACATC
TTGCCGGTAGCGCCGACCGGTTCAAATCCCGCATCCCTTCCGGGTCAGATGCCTCTCAGATCAGCACCCGTATCTATCCG
CGCTTTGGCGGCTACCTCAAAGGCGGATTTGTCAGCCATGTGCAGGGCAAGCTCTTTGTACGCACGGGTCTAGAAGAGGT
GGATCTGCGCATCCACAATGTGTTTGTCGAAGGCGTTGAAAACCCCTGCGCCACTGAACTTACAAACATCGACCTCTGCC
ACCATCACGCAAGCGACTGGGCGCAGTGGATCGCACAATATCGTTACCGCCTGAACAAGGGCTCCTATCGGGCCGATCTG
CGCCCCGCGCAGCCCCGCAGCGCAGGCGGCACCACCCTGCACGAGCTGCTTTCGCTGCTCGAGGCGGAAGAGGGCGAATC
CGGCCTCAGGGCGTTTTTTGACGAGACCTGCGCCGACAGCCCCGAACTCCGCCAAACGCTTGCCTCAGAGGGGCTTTTGC
GTCAACGCGCCCTGCCCCTGGTCGCAATTCGTCAGAAACACTTCCCGCATTTTTCGTAA

Upstream 100 bases:

>100_bases
CTCCTCCACCAAGGAGATGATGGTCTAACACCACGGGCGCTCCTCACCGGGCGCCCGTCTTGGTTTCAAAAGGGTTAAGA
GACGAGGGCAAGCCTCTGCT

Downstream 100 bases:

>100_bases
ACTGTTTCTCAATTACGGCAAATTCCGGGATTCTCACCCAGTTCCCCACCGTTAAGTCGCGATCATTTGACCGTATCTCT
CAATTTTGCTATGTGCCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MTVKWGLVATLKAEAEAVLNFAAWHLEQGAHRLFLYLDAACPDALPHLQDHPRIRVIETTEAHWLKRRGRVPEKHQVRQS
LNATRAYRRQARDLDWLIHIDVDEFLWSPDPLAPQLEALDPDVLCARVRPLEHLAGSADRFKSRIPSGSDASQISTRIYP
RFGGYLKGGFVSHVQGKLFVRTGLEEVDLRIHNVFVEGVENPCATELTNIDLCHHHASDWAQWIAQYRYRLNKGSYRADL
RPAQPRSAGGTTLHELLSLLEAEEGESGLRAFFDETCADSPELRQTLASEGLLRQRALPLVAIRQKHFPHFS

Sequences:

>Translated_312_residues
MTVKWGLVATLKAEAEAVLNFAAWHLEQGAHRLFLYLDAACPDALPHLQDHPRIRVIETTEAHWLKRRGRVPEKHQVRQS
LNATRAYRRQARDLDWLIHIDVDEFLWSPDPLAPQLEALDPDVLCARVRPLEHLAGSADRFKSRIPSGSDASQISTRIYP
RFGGYLKGGFVSHVQGKLFVRTGLEEVDLRIHNVFVEGVENPCATELTNIDLCHHHASDWAQWIAQYRYRLNKGSYRADL
RPAQPRSAGGTTLHELLSLLEAEEGESGLRAFFDETCADSPELRQTLASEGLLRQRALPLVAIRQKHFPHFS
>Mature_311_residues
TVKWGLVATLKAEAEAVLNFAAWHLEQGAHRLFLYLDAACPDALPHLQDHPRIRVIETTEAHWLKRRGRVPEKHQVRQSL
NATRAYRRQARDLDWLIHIDVDEFLWSPDPLAPQLEALDPDVLCARVRPLEHLAGSADRFKSRIPSGSDASQISTRIYPR
FGGYLKGGFVSHVQGKLFVRTGLEEVDLRIHNVFVEGVENPCATELTNIDLCHHHASDWAQWIAQYRYRLNKGSYRADLR
PAQPRSAGGTTLHELLSLLEAEEGESGLRAFFDETCADSPELRQTLASEGLLRQRALPLVAIRQKHFPHFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35420; Mature: 35288

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVKWGLVATLKAEAEAVLNFAAWHLEQGAHRLFLYLDAACPDALPHLQDHPRIRVIETT
CCEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECH
EAHWLKRRGRVPEKHQVRQSLNATRAYRRQARDLDWLIHIDVDEFLWSPDPLAPQLEALD
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCHHHHCC
PDVLCARVRPLEHLAGSADRFKSRIPSGSDASQISTRIYPRFGGYLKGGFVSHVQGKLFV
HHHHHHHCCHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCEEHE
RTGLEEVDLRIHNVFVEGVENPCATELTNIDLCHHHASDWAQWIAQYRYRLNKGSYRADL
ECCHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC
RPAQPRSAGGTTLHELLSLLEAEEGESGLRAFFDETCADSPELRQTLASEGLLRQRALPL
CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCH
VAIRQKHFPHFS
HHHHHHCCCCCC
>Mature Secondary Structure 
TVKWGLVATLKAEAEAVLNFAAWHLEQGAHRLFLYLDAACPDALPHLQDHPRIRVIETT
CEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECH
EAHWLKRRGRVPEKHQVRQSLNATRAYRRQARDLDWLIHIDVDEFLWSPDPLAPQLEALD
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCHHHHCC
PDVLCARVRPLEHLAGSADRFKSRIPSGSDASQISTRIYPRFGGYLKGGFVSHVQGKLFV
HHHHHHHCCHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCEEHE
RTGLEEVDLRIHNVFVEGVENPCATELTNIDLCHHHASDWAQWIAQYRYRLNKGSYRADL
ECCHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC
RPAQPRSAGGTTLHELLSLLEAEEGESGLRAFFDETCADSPELRQTLASEGLLRQRALPL
CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCH
VAIRQKHFPHFS
HHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA