Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is cutM [H]

Identifier: 99081605

GI number: 99081605

Start: 1854464

End: 1855252

Strand: Reverse

Name: cutM [H]

Synonym: TM1040_1764

Alternate gene names: 99081605

Gene position: 1855252-1854464 (Counterclockwise)

Preceding gene: 99081606

Following gene: 99081603

Centisome position: 57.96

GC content: 64.01

Gene sequence:

>789_bases
ATGTATGAGTTTGAATTCGCACGTCCCGAAACGGTGGCTGATGCGGTACAGGCGCTGAGCGAAGAGGATGCGCAGGCGCT
GGGTGGGGGACAGACGTTGATCCCGACGTTGAAACAGCGTTTGGCGATGCCCTCGACGCTGGTGAGCCTCGGCGGGATCG
CGGAGATCAGAGGGATCTGTCAGACAGATGATGGCAAACTGGCCATCGGCGGGGCGACGACCCACGCAGAGGTGGCAGAG
GGCGCCGCGGCCTATCCGGCGCTTGCCGCCCTGGCGGGTCAGATCGGCGATCCGGCAGTGCGCAATCGTGGCACCATTGG
CGGCTCACTTGCCAATAATGATCCCGCCGCCTGTTACCCGGCCGCCGCTCTGGCCAGCGGGGCCACGATTGTGACCAATG
CCCGCGAGATCGCGGCGGATGACTATTTCCAGGGGATGTTCACCACCGCGCTTGAGGAAGGTGAGATCATCACCGAGGTG
CGGTTCCCTGTGGCCGAGGCCGCGAATTACCAGAAGTTTCTGCAGCCGGCGTCGCGGTTTGCGATGGTCGGGGTGTTCGT
CGCGAAATTTGCCGATGGTGTTCGGGTGGCGGTCACAGGTGCCTCTGAGGAAGGCGTGTTCCGCTGGCGCGAGGCGGAGG
CTGCGCTCTCGGGCGCTTTCAGCGCTGATGCGATTTCAGGCCTGTCGGTAGAGGCCGAGGGCATGATCGGCGACATCCAT
GGCACCAAGGACTATCGCGCGCATCTCGTGACCGTGATGACCAAACGTGCCGTTGCGGCCGCGGGCTGA

Upstream 100 bases:

>100_bases
GCAAGGTTGAGATGGCGGAGCGGGGGCCAGCCCCCGCACCCCCGGGATATTTATGAGAAGATGAAGGAGCCCAAGGGCGA
TCCTTCGGAAAGGAAGAGCG

Downstream 100 bases:

>100_bases
GTAAGGCTCGATTTCGATCATTGAAAGCTAAAAAGCCTCCCTTGCGTATCAAGGGAGGCTTTTTTTATGTGCAACCGGGC
ACCGTGACCTGCGTCATGCG

Product: molybdopterin dehydrogenase, FAD-binding

Products: NA

Alternate protein names: CO dehydrogenase subunit M; CO-DH M [H]

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MYEFEFARPETVADAVQALSEEDAQALGGGQTLIPTLKQRLAMPSTLVSLGGIAEIRGICQTDDGKLAIGGATTHAEVAE
GAAAYPALAALAGQIGDPAVRNRGTIGGSLANNDPAACYPAAALASGATIVTNAREIAADDYFQGMFTTALEEGEIITEV
RFPVAEAANYQKFLQPASRFAMVGVFVAKFADGVRVAVTGASEEGVFRWREAEAALSGAFSADAISGLSVEAEGMIGDIH
GTKDYRAHLVTVMTKRAVAAAG

Sequences:

>Translated_262_residues
MYEFEFARPETVADAVQALSEEDAQALGGGQTLIPTLKQRLAMPSTLVSLGGIAEIRGICQTDDGKLAIGGATTHAEVAE
GAAAYPALAALAGQIGDPAVRNRGTIGGSLANNDPAACYPAAALASGATIVTNAREIAADDYFQGMFTTALEEGEIITEV
RFPVAEAANYQKFLQPASRFAMVGVFVAKFADGVRVAVTGASEEGVFRWREAEAALSGAFSADAISGLSVEAEGMIGDIH
GTKDYRAHLVTVMTKRAVAAAG
>Mature_262_residues
MYEFEFARPETVADAVQALSEEDAQALGGGQTLIPTLKQRLAMPSTLVSLGGIAEIRGICQTDDGKLAIGGATTHAEVAE
GAAAYPALAALAGQIGDPAVRNRGTIGGSLANNDPAACYPAAALASGATIVTNAREIAADDYFQGMFTTALEEGEIITEV
RFPVAEAANYQKFLQPASRFAMVGVFVAKFADGVRVAVTGASEEGVFRWREAEAALSGAFSADAISGLSVEAEGMIGDIH
GTKDYRAHLVTVMTKRAVAAAG

Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1789231, Length=291, Percent_Identity=27.4914089347079, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.2.99.2 [H]

Molecular weight: Translated: 27001; Mature: 27001

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEFEFARPETVADAVQALSEEDAQALGGGQTLIPTLKQRLAMPSTLVSLGGIAEIRGIC
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHHCE
QTDDGKLAIGGATTHAEVAEGAAAYPALAALAGQIGDPAVRNRGTIGGSLANNDPAACYP
ECCCCCEEECCCCCHHHHHCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHH
AAALASGATIVTNAREIAADDYFQGMFTTALEEGEIITEVRFPVAEAANYQKFLQPASRF
HHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCHHHHHHHHHHH
AMVGVFVAKFADGVRVAVTGASEEGVFRWREAEAALSGAFSADAISGLSVEAEGMIGDIH
HHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHCCCEEECCCCEEECC
GTKDYRAHLVTVMTKRAVAAAG
CCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYEFEFARPETVADAVQALSEEDAQALGGGQTLIPTLKQRLAMPSTLVSLGGIAEIRGIC
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHHCE
QTDDGKLAIGGATTHAEVAEGAAAYPALAALAGQIGDPAVRNRGTIGGSLANNDPAACYP
ECCCCCEEECCCCCHHHHHCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHH
AAALASGATIVTNAREIAADDYFQGMFTTALEEGEIITEVRFPVAEAANYQKFLQPASRF
HHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCHHHHHHHHHHH
AMVGVFVAKFADGVRVAVTGASEEGVFRWREAEAALSGAFSADAISGLSVEAEGMIGDIH
HHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHCCCEEECCCCEEECC
GTKDYRAHLVTVMTKRAVAAAG
CCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10482497; 2818128; 10966817; 11076018 [H]