| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is cutM [H]
Identifier: 99081605
GI number: 99081605
Start: 1854464
End: 1855252
Strand: Reverse
Name: cutM [H]
Synonym: TM1040_1764
Alternate gene names: 99081605
Gene position: 1855252-1854464 (Counterclockwise)
Preceding gene: 99081606
Following gene: 99081603
Centisome position: 57.96
GC content: 64.01
Gene sequence:
>789_bases ATGTATGAGTTTGAATTCGCACGTCCCGAAACGGTGGCTGATGCGGTACAGGCGCTGAGCGAAGAGGATGCGCAGGCGCT GGGTGGGGGACAGACGTTGATCCCGACGTTGAAACAGCGTTTGGCGATGCCCTCGACGCTGGTGAGCCTCGGCGGGATCG CGGAGATCAGAGGGATCTGTCAGACAGATGATGGCAAACTGGCCATCGGCGGGGCGACGACCCACGCAGAGGTGGCAGAG GGCGCCGCGGCCTATCCGGCGCTTGCCGCCCTGGCGGGTCAGATCGGCGATCCGGCAGTGCGCAATCGTGGCACCATTGG CGGCTCACTTGCCAATAATGATCCCGCCGCCTGTTACCCGGCCGCCGCTCTGGCCAGCGGGGCCACGATTGTGACCAATG CCCGCGAGATCGCGGCGGATGACTATTTCCAGGGGATGTTCACCACCGCGCTTGAGGAAGGTGAGATCATCACCGAGGTG CGGTTCCCTGTGGCCGAGGCCGCGAATTACCAGAAGTTTCTGCAGCCGGCGTCGCGGTTTGCGATGGTCGGGGTGTTCGT CGCGAAATTTGCCGATGGTGTTCGGGTGGCGGTCACAGGTGCCTCTGAGGAAGGCGTGTTCCGCTGGCGCGAGGCGGAGG CTGCGCTCTCGGGCGCTTTCAGCGCTGATGCGATTTCAGGCCTGTCGGTAGAGGCCGAGGGCATGATCGGCGACATCCAT GGCACCAAGGACTATCGCGCGCATCTCGTGACCGTGATGACCAAACGTGCCGTTGCGGCCGCGGGCTGA
Upstream 100 bases:
>100_bases GCAAGGTTGAGATGGCGGAGCGGGGGCCAGCCCCCGCACCCCCGGGATATTTATGAGAAGATGAAGGAGCCCAAGGGCGA TCCTTCGGAAAGGAAGAGCG
Downstream 100 bases:
>100_bases GTAAGGCTCGATTTCGATCATTGAAAGCTAAAAAGCCTCCCTTGCGTATCAAGGGAGGCTTTTTTTATGTGCAACCGGGC ACCGTGACCTGCGTCATGCG
Product: molybdopterin dehydrogenase, FAD-binding
Products: NA
Alternate protein names: CO dehydrogenase subunit M; CO-DH M [H]
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MYEFEFARPETVADAVQALSEEDAQALGGGQTLIPTLKQRLAMPSTLVSLGGIAEIRGICQTDDGKLAIGGATTHAEVAE GAAAYPALAALAGQIGDPAVRNRGTIGGSLANNDPAACYPAAALASGATIVTNAREIAADDYFQGMFTTALEEGEIITEV RFPVAEAANYQKFLQPASRFAMVGVFVAKFADGVRVAVTGASEEGVFRWREAEAALSGAFSADAISGLSVEAEGMIGDIH GTKDYRAHLVTVMTKRAVAAAG
Sequences:
>Translated_262_residues MYEFEFARPETVADAVQALSEEDAQALGGGQTLIPTLKQRLAMPSTLVSLGGIAEIRGICQTDDGKLAIGGATTHAEVAE GAAAYPALAALAGQIGDPAVRNRGTIGGSLANNDPAACYPAAALASGATIVTNAREIAADDYFQGMFTTALEEGEIITEV RFPVAEAANYQKFLQPASRFAMVGVFVAKFADGVRVAVTGASEEGVFRWREAEAALSGAFSADAISGLSVEAEGMIGDIH GTKDYRAHLVTVMTKRAVAAAG >Mature_262_residues MYEFEFARPETVADAVQALSEEDAQALGGGQTLIPTLKQRLAMPSTLVSLGGIAEIRGICQTDDGKLAIGGATTHAEVAE GAAAYPALAALAGQIGDPAVRNRGTIGGSLANNDPAACYPAAALASGATIVTNAREIAADDYFQGMFTTALEEGEIITEV RFPVAEAANYQKFLQPASRFAMVGVFVAKFADGVRVAVTGASEEGVFRWREAEAALSGAFSADAISGLSVEAEGMIGDIH GTKDYRAHLVTVMTKRAVAAAG
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1319
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1789231, Length=291, Percent_Identity=27.4914089347079, Blast_Score=82, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005107 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR002346 [H]
Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 27001; Mature: 27001
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYEFEFARPETVADAVQALSEEDAQALGGGQTLIPTLKQRLAMPSTLVSLGGIAEIRGIC CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHHCE QTDDGKLAIGGATTHAEVAEGAAAYPALAALAGQIGDPAVRNRGTIGGSLANNDPAACYP ECCCCCEEECCCCCHHHHHCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHH AAALASGATIVTNAREIAADDYFQGMFTTALEEGEIITEVRFPVAEAANYQKFLQPASRF HHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCHHHHHHHHHHH AMVGVFVAKFADGVRVAVTGASEEGVFRWREAEAALSGAFSADAISGLSVEAEGMIGDIH HHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHCCCEEECCCCEEECC GTKDYRAHLVTVMTKRAVAAAG CCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYEFEFARPETVADAVQALSEEDAQALGGGQTLIPTLKQRLAMPSTLVSLGGIAEIRGIC CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHHCE QTDDGKLAIGGATTHAEVAEGAAAYPALAALAGQIGDPAVRNRGTIGGSLANNDPAACYP ECCCCCEEECCCCCHHHHHCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHH AAALASGATIVTNAREIAADDYFQGMFTTALEEGEIITEVRFPVAEAANYQKFLQPASRF HHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCHHHHHHHHHHH AMVGVFVAKFADGVRVAVTGASEEGVFRWREAEAALSGAFSADAISGLSVEAEGMIGDIH HHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHCCCEEECCCCEEECC GTKDYRAHLVTVMTKRAVAAAG CCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]