| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081603
Identifier: 99081603
GI number: 99081603
Start: 1852751
End: 1853548
Strand: Reverse
Name: 99081603
Synonym: TM1040_1762
Alternate gene names: NA
Gene position: 1853548-1852751 (Counterclockwise)
Preceding gene: 99081605
Following gene: 99081596
Centisome position: 57.91
GC content: 63.66
Gene sequence:
>798_bases ATGAAAATTGCAGGAGTGGGCGCCGCTATTGGTTTGGTGGTGGTTGCAGGGGCCGTTTGGTACCTCAATCAGCCCGAGGA CCAGCCCGTCACCGATATGCCCGCCGAGGTCGCCAATGAAGCGGCCCCAGTCACAACCGAGGACACCGAGGCAGCCGCAG AGGTTGAAACCGGCGAACCTGAAGCGGGCGACCTGCAGGAGCAGGCGCAAGAGGCTGTTGATGCGATTGCCGAAACAGCC GAGACGGCCGTAGATCAGGCCACAGAGGCGGTTGAAAACGCCGTTGATGCAGCTTCTGAAGCAGCCGAGAACCTGGTTGA GGGGGCAGGCGAGACGGTAGAGGCCGTTCAGGAACAAGCCGAAGCTGCCGTTGCCGCAGCCGAGGAAGAGGCCGTGGCGG CGGTCGAGGCGGCACAGGACGGTGTTGCAGACGCCGTTGAGGGCGCGCAGGAGAGCGCATCCGAGGCCGTCAGCACCGTA ACCGAAGGGGCGGTGGACTTGGCCACAGAGGCGCAGAACACTGCGGATGCCGCAGCTGAAGCCGTCACCGAAGCTGCTAC ACCGGAGATTGGGGCGGATGCGACTGCAGATGTCACCGCGGCTGCAGAGGCCGAGACGCCAGCCGCCCTGCTGACGCCTG AGGGTTTCAACTACGACCGTGTGATCGAGCTCATCGAGGGCTCCGAGTTGGACCCGCTGAAAAAGACTGCGCTGAAGTCC GCGATCACGCAGGCACGTGATAACCCGGATCTGTTGAAGGCAGCGCTGCAATCGGCGCGCACCGCATTGGGTCTCTGA
Upstream 100 bases:
>100_bases AGTGCGGCGAAAGACTTCCCCCTTGTTGTATCCCTCGATTAAGCAGAAGTACATCTGCAATCCGTCCCGCGTCGGGACGT CAGCATGGAAGGATATTGCC
Downstream 100 bases:
>100_bases CCCCCTTGCACCGCTTTGTGAACAACGTCCCAAACGCCCCGTTCCTCGGGGCGTTTTCTATTGAGCTGTGTCAGCAAGGC TCTGTTCTAAATAGAAAACG
Product: mucin-associated surface protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MKIAGVGAAIGLVVVAGAVWYLNQPEDQPVTDMPAEVANEAAPVTTEDTEAAAEVETGEPEAGDLQEQAQEAVDAIAETA ETAVDQATEAVENAVDAASEAAENLVEGAGETVEAVQEQAEAAVAAAEEEAVAAVEAAQDGVADAVEGAQESASEAVSTV TEGAVDLATEAQNTADAAAEAVTEAATPEIGADATADVTAAAEAETPAALLTPEGFNYDRVIELIEGSELDPLKKTALKS AITQARDNPDLLKAALQSARTALGL
Sequences:
>Translated_265_residues MKIAGVGAAIGLVVVAGAVWYLNQPEDQPVTDMPAEVANEAAPVTTEDTEAAAEVETGEPEAGDLQEQAQEAVDAIAETA ETAVDQATEAVENAVDAASEAAENLVEGAGETVEAVQEQAEAAVAAAEEEAVAAVEAAQDGVADAVEGAQESASEAVSTV TEGAVDLATEAQNTADAAAEAVTEAATPEIGADATADVTAAAEAETPAALLTPEGFNYDRVIELIEGSELDPLKKTALKS AITQARDNPDLLKAALQSARTALGL >Mature_265_residues MKIAGVGAAIGLVVVAGAVWYLNQPEDQPVTDMPAEVANEAAPVTTEDTEAAAEVETGEPEAGDLQEQAQEAVDAIAETA ETAVDQATEAVENAVDAASEAAENLVEGAGETVEAVQEQAEAAVAAAEEEAVAAVEAAQDGVADAVEGAQESASEAVSTV TEGAVDLATEAQNTADAAAEAVTEAATPEIGADATADVTAAAEAETPAALLTPEGFNYDRVIELIEGSELDPLKKTALKS AITQARDNPDLLKAALQSARTALGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26551; Mature: 26551
Theoretical pI: Translated: 3.29; Mature: 3.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAGVGAAIGLVVVAGAVWYLNQPEDQPVTDMPAEVANEAAPVTTEDTEAAAEVETGEP CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHCCCCCC EAGDLQEQAQEAVDAIAETAETAVDQATEAVENAVDAASEAAENLVEGAGETVEAVQEQA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH EAAVAAAEEEAVAAVEAAQDGVADAVEGAQESASEAVSTVTEGAVDLATEAQNTADAAAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVTEAATPEIGADATADVTAAAEAETPAALLTPEGFNYDRVIELIEGSELDPLKKTALKS HHHHHCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHH AITQARDNPDLLKAALQSARTALGL HHHHCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKIAGVGAAIGLVVVAGAVWYLNQPEDQPVTDMPAEVANEAAPVTTEDTEAAAEVETGEP CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHCCCCCC EAGDLQEQAQEAVDAIAETAETAVDQATEAVENAVDAASEAAENLVEGAGETVEAVQEQA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH EAAVAAAEEEAVAAVEAAQDGVADAVEGAQESASEAVSTVTEGAVDLATEAQNTADAAAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVTEAATPEIGADATADVTAAAEAETPAALLTPEGFNYDRVIELIEGSELDPLKKTALKS HHHHHCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHH AITQARDNPDLLKAALQSARTALGL HHHHCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA