Click here to switch to the map view.

The map label for this gene is yobA [C]

Identifier: 99081584

GI number: 99081584

Start: 1838226

End: 1838576

Strand: Reverse

Name: yobA [C]

Synonym: TM1040_1743

Alternate gene names: 99081584

Gene position: 1838576-1838226 (Counterclockwise)

Preceding gene: 99081585

Following gene: 99081583

Centisome position: 57.44

GC content: 56.41

Gene sequence:

>351_bases
ATGAAGACCATGAAGAAAACCGCACTGATCGTTTGGCTTGCCTGCATTTCTTCAGGCGCGTTTGCCCATTCCAGAGTGGA
TACGACCACCCCTGCGGATGGCGACGTCATGTCGGAGGTTCCGGCGCAGATCAGCTTTGATTTTGCGGATGACATTCGTC
TCACGCGGGTCGAAATGACCCACGCAGAGCATCCGTCGGTGCAATTGGACCTGGGCGATCAAAAGAGCTTTGATCGCGCG
TTCAACCTGCCTTTGAACGACATGGGGGCGGGCACCTACCAGATCGAGTGGCGCGGGCTCAGCATTGACGGCCATGCGAT
GCAGGGCGGCTTTACTTTCGAAGTGGAGTAA

Upstream 100 bases:

>100_bases
TTGGTGACATGCCCCCGGTCGAGGGTCTCACACGGGGCAATGTGGCCATGGTGATCGACTATATTCGCGCGGTTCAGCGC
GCCAACGGGATAAACTGAGG

Downstream 100 bases:

>100_bases
GCATGCCGGATATTTGGGCGCAGGCCGCGATACTGGTAAAAGTGCTCCTGTATGTGGGGGCATTGGGTGCAACCGGTCTG
GTGATGATACGGCTGATCTT

Product: copper resistance protein CopC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MKTMKKTALIVWLACISSGAFAHSRVDTTTPADGDVMSEVPAQISFDFADDIRLTRVEMTHAEHPSVQLDLGDQKSFDRA
FNLPLNDMGAGTYQIEWRGLSIDGHAMQGGFTFEVE

Sequences:

>Translated_116_residues
MKTMKKTALIVWLACISSGAFAHSRVDTTTPADGDVMSEVPAQISFDFADDIRLTRVEMTHAEHPSVQLDLGDQKSFDRA
FNLPLNDMGAGTYQIEWRGLSIDGHAMQGGFTFEVE
>Mature_116_residues
MKTMKKTALIVWLACISSGAFAHSRVDTTTPADGDVMSEVPAQISFDFADDIRLTRVEMTHAEHPSVQLDLGDQKSFDRA
FNLPLNDMGAGTYQIEWRGLSIDGHAMQGGFTFEVE

Specific function: Unknown

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12795; Mature: 12795

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTMKKTALIVWLACISSGAFAHSRVDTTTPADGDVMSEVPAQISFDFADDIRLTRVEMT
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCEEEECCCCCEEEEEEEEC
HAEHPSVQLDLGDQKSFDRAFNLPLNDMGAGTYQIEWRGLSIDGHAMQGGFTFEVE
CCCCCEEEEECCCCCCCCEEECCCCCCCCCCEEEEEEEEEEECCCEECCCEEEEEC
>Mature Secondary Structure
MKTMKKTALIVWLACISSGAFAHSRVDTTTPADGDVMSEVPAQISFDFADDIRLTRVEMT
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCEEEECCCCCEEEEEEEEC
HAEHPSVQLDLGDQKSFDRAFNLPLNDMGAGTYQIEWRGLSIDGHAMQGGFTFEVE
CCCCCEEEEECCCCCCCCEEECCCCCCCCCCEEEEEEEEEEECCCEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA