Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081558

Identifier: 99081558

GI number: 99081558

Start: 1815914

End: 1816507

Strand: Direct

Name: 99081558

Synonym: TM1040_1717

Alternate gene names: NA

Gene position: 1815914-1816507 (Clockwise)

Preceding gene: 99081557

Following gene: 99081562

Centisome position: 56.73

GC content: 62.79

Gene sequence:

>594_bases
ATGTCTGACGCCCCCTCGGAACCGCTTGGGTTTTCCTGTGCCTGTGGCGCGCTCTCCGGTCACATCGAGGCGGCCTCAGT
CAAGCAAGGCACCCGCCTACGCTGCCACTGCACCGATTGCCGTGCAGTGGAGCTCTATCATGGGTCTCCGGATCCAAAAG
GAAGCGGGGTCGACCTGCTGCAGCTCAACCCGGATATGGTAGTGATCGACCGGGGCGCAGATCAGCTACACCTGCTGCAG
CTGTCTCCCAAGGGGCTCTATCGTTGGTATGCGGGCTGTTGCGGCACGCCGCTGTTCAATGGCCTGCGCAATCCGAGGCT
GCCCTTCATCGCGGTCCGCACGGCGCTTTTCTCCGAACCCGACCGCCTAGGGCGCGTGGTGGCAGAGGCCTTTATTCCAC
AACCGGGGAAACCGCCACGGCACAAGGGCGCGGCGCGCATGACAATGAAACTGGCCAGTCGAATGATTTCTGCCTGGGTC
TCCGGGCGCTGGCGCCAAACCGCGTTTTTTGACGGTCAGAGCGGGCGACCAGTGGCAGAGCCACATGTGTTGTCCAAGGC
CGAACGCAGGGCGCTGACCGCAGACAAGCAATAA

Upstream 100 bases:

>100_bases
ACAACATCCGTCCGCTTGTGATAGATTTCATGGATGCCAACGCGCGCCAACCTGTGCGCAAACAGCCCAAGAAAACCGCA
GCCAAATAGAGGGCATTTTC

Downstream 100 bases:

>100_bases
ATCTCAAGCGCTTGCGCGATAATTCGCAGACAAATGCAACACGTCCTCTGACAGCTCTTGCATGGGCGTATCCGCGTGCG
CGATCACCGGTGCTGCGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MSDAPSEPLGFSCACGALSGHIEAASVKQGTRLRCHCTDCRAVELYHGSPDPKGSGVDLLQLNPDMVVIDRGADQLHLLQ
LSPKGLYRWYAGCCGTPLFNGLRNPRLPFIAVRTALFSEPDRLGRVVAEAFIPQPGKPPRHKGAARMTMKLASRMISAWV
SGRWRQTAFFDGQSGRPVAEPHVLSKAERRALTADKQ

Sequences:

>Translated_197_residues
MSDAPSEPLGFSCACGALSGHIEAASVKQGTRLRCHCTDCRAVELYHGSPDPKGSGVDLLQLNPDMVVIDRGADQLHLLQ
LSPKGLYRWYAGCCGTPLFNGLRNPRLPFIAVRTALFSEPDRLGRVVAEAFIPQPGKPPRHKGAARMTMKLASRMISAWV
SGRWRQTAFFDGQSGRPVAEPHVLSKAERRALTADKQ
>Mature_196_residues
SDAPSEPLGFSCACGALSGHIEAASVKQGTRLRCHCTDCRAVELYHGSPDPKGSGVDLLQLNPDMVVIDRGADQLHLLQL
SPKGLYRWYAGCCGTPLFNGLRNPRLPFIAVRTALFSEPDRLGRVVAEAFIPQPGKPPRHKGAARMTMKLASRMISAWVS
GRWRQTAFFDGQSGRPVAEPHVLSKAERRALTADKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21476; Mature: 21345

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDAPSEPLGFSCACGALSGHIEAASVKQGTRLRCHCTDCRAVELYHGSPDPKGSGVDLL
CCCCCCCCCCCEEECCHHCCCEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCCEEEE
QLNPDMVVIDRGADQLHLLQLSPKGLYRWYAGCCGTPLFNGLRNPRLPFIAVRTALFSEP
EECCCEEEEECCCCEEEEEEECCCHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHCCH
DRLGRVVAEAFIPQPGKPPRHKGAARMTMKLASRMISAWVSGRWRQTAFFDGQSGRPVAE
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
PHVLSKAERRALTADKQ
CHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SDAPSEPLGFSCACGALSGHIEAASVKQGTRLRCHCTDCRAVELYHGSPDPKGSGVDLL
CCCCCCCCCCEEECCHHCCCEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCCEEEE
QLNPDMVVIDRGADQLHLLQLSPKGLYRWYAGCCGTPLFNGLRNPRLPFIAVRTALFSEP
EECCCEEEEECCCCEEEEEEECCCHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHCCH
DRLGRVVAEAFIPQPGKPPRHKGAARMTMKLASRMISAWVSGRWRQTAFFDGQSGRPVAE
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
PHVLSKAERRALTADKQ
CHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA