| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is suhB [H]
Identifier: 99081539
GI number: 99081539
Start: 1794466
End: 1795251
Strand: Reverse
Name: suhB [H]
Synonym: TM1040_1698
Alternate gene names: 99081539
Gene position: 1795251-1794466 (Counterclockwise)
Preceding gene: 99081540
Following gene: 99081535
Centisome position: 56.09
GC content: 60.56
Gene sequence:
>786_bases ATGATTGGTAGCGCAAATCTCAATGTGATGATCAAGGCCGCTCGCAAGGCAGGCCGCTCTTTGGTGAAAGATTTCCGCGA GGTGGAAAACCTTCAAGTCTCCACCAAGGGGGCTGGCGATTTTGTCAGCCGCGCCGACATTGCCGCCGAAAAGATCCTGA AAGATGAACTCCTGGGCGCGCGTCCGACCTATGGCTGGCTGGCCGAAGAGGGCGGCGAAATCCCCGGCGAAGATCCGACC CGTCGCTGGATTGTGGACCCGCTCGATGGCACCACCAACTTCCTGCATGGTCTGCCGCATTGGGCCGTCTCTATTGCGCT TGAACACAAAGGCAAGATTGTCGCCGGTGTGGTCTATGACGCGGCCAAGGACGAGATGTTCTTTGCCGAAAAAGGCGCGG GGGCCTGGATGAACGAGACCCGTATCCGGGTGTCTGCGCGCCACCGCATGATCGAGTCGATCTTTGCCACCGGCCTACCG TTTGCCGGTCGTGCCGATCTGCCGGAGACTCTGCAGGATCTGGCCCGCCTGATGCCTGCTTGTGCCGGGGTGCGCCGCTG GGGTGCAGCCGCTCTCGACATGGCCTATGTGGCCGCCGGCCGGTACGAGGGGTTCTGGGAACGTCGCCTAAACGCCTGGG ACCTGGCCGCCGGGATTATCATCGTCAAGGAAGCCGGTGGTCTGTGCGAAGCGCTGGATCCCAGCGAGTCGATCATCGAA AGCGGCGAGGTAATCTGCGCGAATGAACCCATTTTTGAGAATTTCACCAAGGTGATCCGCGGCTAA
Upstream 100 bases:
>100_bases GAAACTTAACCGCAAAGGGGCTCGCCCCCTTGGCAACTGCGCACAGCCCGTGTATGGGCACCCTTTGACCGACATCTCCC CCGCAAGGACAGCTCGTACA
Downstream 100 bases:
>100_bases GCTGTTCGAGACCCTGCAGATCTCGGATGTGCAGTGAAAGCCTCACACCCCGGTCGCCGATGGGCGCGCCGGGGTGTTTT TGTTTTGGACCGATCTGCGC
Product: inositol monophosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MIGSANLNVMIKAARKAGRSLVKDFREVENLQVSTKGAGDFVSRADIAAEKILKDELLGARPTYGWLAEEGGEIPGEDPT RRWIVDPLDGTTNFLHGLPHWAVSIALEHKGKIVAGVVYDAAKDEMFFAEKGAGAWMNETRIRVSARHRMIESIFATGLP FAGRADLPETLQDLARLMPACAGVRRWGAAALDMAYVAAGRYEGFWERRLNAWDLAAGIIIVKEAGGLCEALDPSESIIE SGEVICANEPIFENFTKVIRG
Sequences:
>Translated_261_residues MIGSANLNVMIKAARKAGRSLVKDFREVENLQVSTKGAGDFVSRADIAAEKILKDELLGARPTYGWLAEEGGEIPGEDPT RRWIVDPLDGTTNFLHGLPHWAVSIALEHKGKIVAGVVYDAAKDEMFFAEKGAGAWMNETRIRVSARHRMIESIFATGLP FAGRADLPETLQDLARLMPACAGVRRWGAAALDMAYVAAGRYEGFWERRLNAWDLAAGIIIVKEAGGLCEALDPSESIIE SGEVICANEPIFENFTKVIRG >Mature_261_residues MIGSANLNVMIKAARKAGRSLVKDFREVENLQVSTKGAGDFVSRADIAAEKILKDELLGARPTYGWLAEEGGEIPGEDPT RRWIVDPLDGTTNFLHGLPHWAVSIALEHKGKIVAGVVYDAAKDEMFFAEKGAGAWMNETRIRVSARHRMIESIFATGLP FAGRADLPETLQDLARLMPACAGVRRWGAAALDMAYVAAGRYEGFWERRLNAWDLAAGIIIVKEAGGLCEALDPSESIIE SGEVICANEPIFENFTKVIRG
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=257, Percent_Identity=33.4630350194552, Blast_Score=128, Evalue=7e-30, Organism=Homo sapiens, GI221625487, Length=256, Percent_Identity=33.203125, Blast_Score=127, Evalue=8e-30, Organism=Homo sapiens, GI7657236, Length=226, Percent_Identity=33.1858407079646, Blast_Score=119, Evalue=2e-27, Organism=Homo sapiens, GI221625507, Length=146, Percent_Identity=34.2465753424658, Blast_Score=86, Evalue=4e-17, Organism=Escherichia coli, GI1788882, Length=242, Percent_Identity=41.3223140495868, Blast_Score=206, Evalue=1e-54, Organism=Escherichia coli, GI1790659, Length=214, Percent_Identity=29.9065420560748, Blast_Score=72, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193202570, Length=255, Percent_Identity=34.1176470588235, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI193202572, Length=252, Percent_Identity=34.5238095238095, Blast_Score=124, Evalue=6e-29, Organism=Saccharomyces cerevisiae, GI6320493, Length=235, Percent_Identity=32.7659574468085, Blast_Score=119, Evalue=7e-28, Organism=Saccharomyces cerevisiae, GI6321836, Length=212, Percent_Identity=28.3018867924528, Blast_Score=95, Evalue=9e-21, Organism=Drosophila melanogaster, GI24664922, Length=250, Percent_Identity=29.6, Blast_Score=123, Evalue=1e-28, Organism=Drosophila melanogaster, GI24664926, Length=230, Percent_Identity=30.8695652173913, Blast_Score=117, Evalue=7e-27, Organism=Drosophila melanogaster, GI21357329, Length=266, Percent_Identity=31.203007518797, Blast_Score=115, Evalue=3e-26, Organism=Drosophila melanogaster, GI21357303, Length=214, Percent_Identity=29.9065420560748, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI21357957, Length=232, Percent_Identity=30.6034482758621, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24664918, Length=217, Percent_Identity=28.5714285714286, Blast_Score=96, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 28456; Mature: 28456
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGSANLNVMIKAARKAGRSLVKDFREVENLQVSTKGAGDFVSRADIAAEKILKDELLGA CCCCCCHHHEEHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHCCC RPTYGWLAEEGGEIPGEDPTRRWIVDPLDGTTNFLHGLPHWAVSIALEHKGKIVAGVVYD CCCCCCHHHCCCCCCCCCCCCCEEECCCCCHHHHHHCCCHHHEEEEEECCCCEEEEEEEC AAKDEMFFAEKGAGAWMNETRIRVSARHRMIESIFATGLPFAGRADLPETLQDLARLMPA CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH CAGVRRWGAAALDMAYVAAGRYEGFWERRLNAWDLAAGIIIVKEAGGLCEALDPSESIIE HHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHCCEEEEECCCCCCCCCCCHHHHHH SGEVICANEPIFENFTKVIRG CCCEEECCCCHHHHHHHHHCC >Mature Secondary Structure MIGSANLNVMIKAARKAGRSLVKDFREVENLQVSTKGAGDFVSRADIAAEKILKDELLGA CCCCCCHHHEEHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHCCC RPTYGWLAEEGGEIPGEDPTRRWIVDPLDGTTNFLHGLPHWAVSIALEHKGKIVAGVVYD CCCCCCHHHCCCCCCCCCCCCCEEECCCCCHHHHHHCCCHHHEEEEEECCCCEEEEEEEC AAKDEMFFAEKGAGAWMNETRIRVSARHRMIESIFATGLPFAGRADLPETLQDLARLMPA CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH CAGVRRWGAAALDMAYVAAGRYEGFWERRLNAWDLAAGIIIVKEAGGLCEALDPSESIIE HHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHCCEEEEECCCCCCCCCCCHHHHHH SGEVICANEPIFENFTKVIRG CCCEEECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]