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The map label for this gene is 99081537

Identifier: 99081537

GI number: 99081537

Start: 1793112

End: 1793882

Strand: Direct

Name: 99081537

Synonym: TM1040_1696

Alternate gene names: NA

Gene position: 1793112-1793882 (Clockwise)

Preceding gene: 99081536

Following gene: 99081538

Centisome position: 56.02

GC content: 59.4

Gene sequence:

>771_bases
ATGTTTCCTCTGCGTGATCACAACCCCTCCGGCCGAACGCCTTATGTCGTCTACCTGCTGATGGCGGCCAATATTTTGGG
CTTTCTCTGGTATTCCACCAGCTTTCCCACCGACAGAAGCCTTGCGCTTTTTTACGCCAGCTTCGCCACGGTCCCACGAG
AGATCACGATGGGAGAAGGAACACTCACGCTGCTCACCTCCATGTTCATCCACGGCGGGATCATGCATCTGGCGGGCAAC
ATGCTGTTTCTGTGGATCTTTGGCGACAACATGGAAGACGAAATGGGCCACCTGCCGTTTCTCGCCTTCTATCTCATCTG
CGGGGTGGGAGCGACGTTGGCTCATGTCTGGTCCGCGCCGCTCTCGATGGTGCCACTGGTGGGAGCCTCCGGTGCAATTG
CGGGCGTCATGGGCGGCTACCTTCTGATGTTTCCAAAGGCCCGCGTCGATATTCTCATCATCCTGATCATCTTCTTTCGC
ATCATCCCGATCCCCGCCTTCATCATGCTAGGGCTCTGGCTTGCGATGCAGTTCTTTGGTGGCCTCAACGCCGATCCGAA
CCTGGGCGGTGTCGCTTATTGGGCGCATGCTGGTGGTTTCTTTGTCGGCCTTGCCCTGACCGTGCCGCTCTGGATCATAC
GCGGGGGGCCACGGTTCTGGTCACGCACTCAGGGCCATCCACCGCATCCTGGAACCAGCTATAGCGCCAGCCGCATTCCC
CGCGTCCGCCGCCGCAACACACCGCCTCGCAGCGGCCCTTGGGGCAAGTAA

Upstream 100 bases:

>100_bases
CTGACAACGATGCGCTGCCCGGCCTCTGCGCCGGGCAGCACTTCTGCCCAAGCCTTTCATTTCGCTTGACCTCCCTGCGC
CGACGCCCCAGCTTCAGCGC

Downstream 100 bases:

>100_bases
CCCACTGCCCCCAAAGGAGCATCCCATGGAAACGCATACTGCCAGCTGCCATTGTGGCGCCGTCGAAATTTCAGCCCGCT
TCCCAAACGGTCTCGCCTCA

Product: rhomboid-like protein

Products: NA

Alternate protein names: Integral Membrane Protein; Peptidase; Rhomboid-Like Protein; S54 Family Peptidase; Membrane-Associated Serine Protease; Peptidase Protein; Rhomboid Family Transmembrane Protein; LOW QUALITY PROTEIN Integral Membrane Protein; Transmembrane Rhomboid Family Protein; Subfamily; Rhomboid Serine Protease; Rhomboid Family Membrane Protein; Membrane Associated Serine Protease; Integral Membrane Rhomboid Family Protein; Regulatory Proteins IclR

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MFPLRDHNPSGRTPYVVYLLMAANILGFLWYSTSFPTDRSLALFYASFATVPREITMGEGTLTLLTSMFIHGGIMHLAGN
MLFLWIFGDNMEDEMGHLPFLAFYLICGVGATLAHVWSAPLSMVPLVGASGAIAGVMGGYLLMFPKARVDILIILIIFFR
IIPIPAFIMLGLWLAMQFFGGLNADPNLGGVAYWAHAGGFFVGLALTVPLWIIRGGPRFWSRTQGHPPHPGTSYSASRIP
RVRRRNTPPRSGPWGK

Sequences:

>Translated_256_residues
MFPLRDHNPSGRTPYVVYLLMAANILGFLWYSTSFPTDRSLALFYASFATVPREITMGEGTLTLLTSMFIHGGIMHLAGN
MLFLWIFGDNMEDEMGHLPFLAFYLICGVGATLAHVWSAPLSMVPLVGASGAIAGVMGGYLLMFPKARVDILIILIIFFR
IIPIPAFIMLGLWLAMQFFGGLNADPNLGGVAYWAHAGGFFVGLALTVPLWIIRGGPRFWSRTQGHPPHPGTSYSASRIP
RVRRRNTPPRSGPWGK
>Mature_256_residues
MFPLRDHNPSGRTPYVVYLLMAANILGFLWYSTSFPTDRSLALFYASFATVPREITMGEGTLTLLTSMFIHGGIMHLAGN
MLFLWIFGDNMEDEMGHLPFLAFYLICGVGATLAHVWSAPLSMVPLVGASGAIAGVMGGYLLMFPKARVDILIILIIFFR
IIPIPAFIMLGLWLAMQFFGGLNADPNLGGVAYWAHAGGFFVGLALTVPLWIIRGGPRFWSRTQGHPPHPGTSYSASRIP
RVRRRNTPPRSGPWGK

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28172; Mature: 28172

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPLRDHNPSGRTPYVVYLLMAANILGFLWYSTSFPTDRSLALFYASFATVPREITMGEG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEECCCC
TLTLLTSMFIHGGIMHLAGNMLFLWIFGDNMEDEMGHLPFLAFYLICGVGATLAHVWSAP
HHHHHHHHHHHCCHHHHHCCEEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
LSMVPLVGASGAIAGVMGGYLLMFPKARVDILIILIIFFRIIPIPAFIMLGLWLAMQFFG
HHHHHHCCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLNADPNLGGVAYWAHAGGFFVGLALTVPLWIIRGGPRFWSRTQGHPPHPGTSYSASRIP
CCCCCCCCCCEEEHHHHCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHCC
RVRRRNTPPRSGPWGK
HHHHCCCCCCCCCCCC
>Mature Secondary Structure
MFPLRDHNPSGRTPYVVYLLMAANILGFLWYSTSFPTDRSLALFYASFATVPREITMGEG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEECCCC
TLTLLTSMFIHGGIMHLAGNMLFLWIFGDNMEDEMGHLPFLAFYLICGVGATLAHVWSAP
HHHHHHHHHHHCCHHHHHCCEEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
LSMVPLVGASGAIAGVMGGYLLMFPKARVDILIILIIFFRIIPIPAFIMLGLWLAMQFFG
HHHHHHCCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLNADPNLGGVAYWAHAGGFFVGLALTVPLWIIRGGPRFWSRTQGHPPHPGTSYSASRIP
CCCCCCCCCCEEEHHHHCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHCC
RVRRRNTPPRSGPWGK
HHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA